RNA–Protein interactions for RNA: ENST00000408119.1

RNU6ATAC38P-201, Transcript of RNA, U6atac small nuclear 38, pseudogene, humanhuman

BASIC

Gene RNU6ATAC38P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC38P-201ENST00000408119 NISCHQ9Y2I1 1504 aa4.72□□□□□ -1.65
RNU6ATAC38P-201ENST00000408119 CCDC180Q9P1Z9 1646 aa4.24□□□□□ -1.73
RNU6ATAC38P-201ENST00000408119 ABCC9O60706 1549 aa4.19□□□□□ -1.74
RNU6ATAC38P-201ENST00000408119 DCAF8L2P0C7V8 631 aa4.08□□□□□ -1.76
RNU6ATAC38P-201ENST00000408119 RB1CC1Q8TDY2 1594 aa4.06□□□□□ -1.76
RNU6ATAC38P-201ENST00000408119 NACADO15069 1562 aa4.02□□□□□ -1.77
RNU6ATAC38P-201ENST00000408119 MYO15BQ96JP2 1530 aa3.96□□□□□ -1.78
RNU6ATAC38P-201ENST00000408119 DCAF1Q9Y4B6 1507 aa3.92□□□□□ -1.78
RNU6ATAC38P-201ENST00000408119 ZCCHC6Q5VYS8 1495 aaKnown RBP3.92□□□□□ -1.78
RNU6ATAC38P-201ENST00000408119 PABPN1Q86U42 306 aaKnown RBP eCLIP3.91□□□□□ -1.78
RNU6ATAC38P-201ENST00000408119 SHROOM4Q9ULL8 1493 aa3.9□□□□□ -1.79
RNU6ATAC38P-201ENST00000408119 UNC13AQ9UPW8 1703 aa3.86□□□□□ -1.79
RNU6ATAC38P-201ENST00000408119 SCRIBQ14160 1630 aa3.85□□□□□ -1.79
RNU6ATAC38P-201ENST00000408119 BICRAQ9NZM4 1560 aa3.82□□□□□ -1.8
RNU6ATAC38P-201ENST00000408119 DNAJC5BQ9UF47 199 aa3.82□□□□□ -1.8
RNU6ATAC38P-201ENST00000408119 CECR2Q9BXF3 1484 aa3.79□□□□□ -1.8
RNU6ATAC38P-201ENST00000408119 EIF4G1Q04637 1599 aaKnown RBP3.79□□□□□ -1.8
RNU6ATAC38P-201ENST00000408119 CC2D2AQ9P2K1 1620 aa3.78□□□□□ -1.8
RNU6ATAC38P-201ENST00000408119 SMARCA2P51531 1590 aa3.72□□□□□ -1.81
RNU6ATAC38P-201ENST00000408119 BAZ1AQ9NRL2 1556 aaPredicted RBP3.71□□□□□ -1.82
RNU6ATAC38P-201ENST00000408119 ERCC6Q03468 1493 aa3.7□□□□□ -1.82
RNU6ATAC38P-201ENST00000408119 NCAPD3P42695 1498 aa3.68□□□□□ -1.82
RNU6ATAC38P-201ENST00000408119 BAZ1BQ9UIG0 1483 aaKnown RBP3.68□□□□□ -1.82
RNU6ATAC38P-201ENST00000408119 SMARCA4P51532 1647 aa3.68□□□□□ -1.82
RNU6ATAC38P-201ENST00000408119 ATAD2BQ9ULI0 1458 aa3.67□□□□□ -1.82
RNU6ATAC38P-201ENST00000408119 HMGXB3Q12766 1538 aa3.67□□□□□ -1.82
RNU6ATAC38P-201ENST00000408119 PDS5BQ9NTI5 1447 aa3.65□□□□□ -1.83
RNU6ATAC38P-201ENST00000408119 CUX2O14529 1486 aa3.65□□□□□ -1.83
RNU6ATAC38P-201ENST00000408119 LAMC3Q9Y6N6 1575 aa3.63□□□□□ -1.83
RNU6ATAC38P-201ENST00000408119 PEG3Q9GZU2 1588 aa3.63□□□□□ -1.83
RNU6ATAC38P-201ENST00000408119 MROH2BQ7Z745 1585 aa3.61□□□□□ -1.83
RNU6ATAC38P-201ENST00000408119 CADPSQ9ULU8 1353 aa3.61□□□□□ -1.83
RNU6ATAC38P-201ENST00000408119 CEP164Q9UPV0 1460 aa3.58□□□□□ -1.84
RNU6ATAC38P-201ENST00000408119 WIZO95785 1651 aa3.58□□□□□ -1.84
RNU6ATAC38P-201ENST00000408119 TOP2AP11388 1531 aaKnown RBP3.57□□□□□ -1.84
RNU6ATAC38P-201ENST00000408119 NESP48681 1621 aa3.57□□□□□ -1.84
RNU6ATAC38P-201ENST00000408119 RSF1Q96T23 1441 aaPredicted RBP3.57□□□□□ -1.84
RNU6ATAC38P-201ENST00000408119 DNAJC5Q9H3Z4 198 aa3.57□□□□□ -1.84
RNU6ATAC38P-201ENST00000408119 MRC2Q9UBG0 1479 aa3.56□□□□□ -1.84
RNU6ATAC38P-201ENST00000408119 ABCC8Q09428 1581 aa3.55□□□□□ -1.84
RNU6ATAC38P-201ENST00000408119 FANCD2Q9BXW9 1451 aa3.55□□□□□ -1.84
RNU6ATAC38P-201ENST00000408119 CFTRP13569 1480 aa3.54□□□□□ -1.84
RNU6ATAC38P-201ENST00000408119 KIF21AQ7Z4S6 1674 aa3.54□□□□□ -1.84
RNU6ATAC38P-201ENST00000408119 THOC2Q8NI27 1593 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC38P-201ENST00000408119 WDR62O43379 1518 aa3.53□□□□□ -1.84
RNU6ATAC38P-201ENST00000408119 SUPT5HO00267 1087 aaKnown RBP3.52□□□□□ -1.85
RNU6ATAC38P-201ENST00000408119 OSCARQ8IYS5 282 aa3.52□□□□□ -1.85
RNU6ATAC38P-201ENST00000408119 PRDM2Q13029 1718 aa3.51□□□□□ -1.85
RNU6ATAC38P-201ENST00000408119 CCDC88BA6NC98 1476 aa3.51□□□□□ -1.85
RNU6ATAC38P-201ENST00000408119 IFT140Q96RY7 1462 aa3.5□□□□□ -1.85
RNU6ATAC38P-201ENST00000408119 FBLN2P98095 1184 aa3.49□□□□□ -1.85
RNU6ATAC38P-201ENST00000408119 DNMBPQ6XZF7 1577 aa3.48□□□□□ -1.85
RNU6ATAC38P-201ENST00000408119 TRIM41Q8WV44 630 aa3.48□□□□□ -1.85
RNU6ATAC38P-201ENST00000408119 CHMP7Q8WUX9 453 aaPredicted RBP3.47□□□□□ -1.85
RNU6ATAC38P-201ENST00000408119 URB2Q14146 1524 aaKnown RBP3.47□□□□□ -1.85
RNU6ATAC38P-201ENST00000408119 TOPBP1Q92547 1522 aa3.47□□□□□ -1.85
RNU6ATAC38P-201ENST00000408119 SOGA1O94964 1423 aa3.46□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 WDR97A6NE52 1622 aa3.46□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 FAM9AQ8IZU1 332 aaPredicted RBP3.45□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 WRNQ14191 1432 aaPredicted RBP eCLIP3.44□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 EIF4G3O43432 1585 aaKnown RBP3.43□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 POLA1P09884 1462 aaPredicted RBP3.43□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 GRIN2BQ13224 1484 aa3.43□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 SYNJ1O43426 1573 aa3.42□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 AQRO60306 1485 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 FGD5Q6ZNL6 1462 aa3.42□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 MAGI1Q96QZ7 1491 aaPredicted RBP3.42□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 TDRD9Q8NDG6 1382 aaKnown RBP3.42□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 TRHP20396 242 aaPredicted RBP3.42□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 ZNF608Q9ULD9 1512 aaPredicted RBP3.42□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 GAPVD1Q14C86 1478 aa3.41□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 NPM1P06748 294 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 CYB5RLQ6IPT4 315 aa3.41□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 SYNJ2O15056 1496 aa3.41□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 SNAPC4Q5SXM2 1469 aa3.41□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 RAD54L2Q9Y4B4 1467 aa3.41□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 TARBP1Q13395 1621 aaKnown RBP3.41□□□□□ -1.86
RNU6ATAC38P-201ENST00000408119 ARHGEF11O15085 1522 aa3.39□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 CUX1P39880 1505 aa3.39□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 ABCA10Q8WWZ4 1543 aa3.39□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 RIMBP3CA6NJZ7 1639 aa3.39□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 RIMBP3BA6NNM3 1639 aa3.39□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 TOP2BQ02880 1626 aa3.39□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 RIMBP3Q9UFD9 1639 aa3.39□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 CHD1O14646 1710 aa3.39□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 FHAD1B1AJZ9 1412 aa3.38□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 KIF27Q86VH2 1401 aa3.38□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 PBRM1Q86U86 1689 aa3.38□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 ERICH3Q5RHP9 1530 aa3.38□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 BIVM-ERCC5R4GMW8 1640 aa3.37□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 GRIN2AQ12879 1464 aa3.36□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 ABCA5Q8WWZ7 1642 aa3.36□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 CARMIL2Q6F5E8 1435 aa3.36□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 JPH4Q96JJ6 628 aa3.35□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 CUL7Q14999 1698 aa3.35□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 CLASP1Q7Z460 1538 aa3.34□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 ADAMTS12P58397 1594 aa3.34□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 AEBP2Q6ZN18 517 aaPredicted RBP3.34□□□□□ -1.87
RNU6ATAC38P-201ENST00000408119 ARAP1Q96P48 1450 aa3.34□□□□□ -1.88
RNU6ATAC38P-201ENST00000408119 CARMIL1Q5VZK9 1371 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms