RNA–Protein interactions for RNA: ENST00000406664.5

TBC1D1-205, Transcript of TBC1 domain family member 1, humanhuman

TSL 2

Gene TBC1D1, Length 992 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-205ENST00000406664 NISCHQ9Y2I1 1504 aa48.02■■■■■ 5.28
TBC1D1-205ENST00000406664 CCDC180Q9P1Z9 1646 aa42.86■■■■■ 4.45
TBC1D1-205ENST00000406664 ABCC9O60706 1549 aa41.95■■■■■ 4.31
TBC1D1-205ENST00000406664 RB1CC1Q8TDY2 1594 aa40.36■■■■■ 4.05
TBC1D1-205ENST00000406664 NACADO15069 1562 aa40.28■■■■■ 4.04
TBC1D1-205ENST00000406664 MYO15BQ96JP2 1530 aa40.01■■■■■ 4
TBC1D1-205ENST00000406664 DCAF8L2P0C7V8 631 aa39.99■■■■□ 3.99
TBC1D1-205ENST00000406664 ZCCHC6Q5VYS8 1495 aaKnown RBP39.97■■■■□ 3.99
TBC1D1-205ENST00000406664 DCAF1Q9Y4B6 1507 aa39.77■■■■□ 3.96
TBC1D1-205ENST00000406664 UNC13AQ9UPW8 1703 aa39.55■■■■□ 3.92
TBC1D1-205ENST00000406664 BICRAQ9NZM4 1560 aa39.16■■■■□ 3.86
TBC1D1-205ENST00000406664 PABPN1Q86U42 306 aaKnown RBP eCLIP39.11■■■■□ 3.85
TBC1D1-205ENST00000406664 SCRIBQ14160 1630 aa38.99■■■■□ 3.83
TBC1D1-205ENST00000406664 SHROOM4Q9ULL8 1493 aa38.76■■■■□ 3.8
TBC1D1-205ENST00000406664 DNAJC5BQ9UF47 199 aa38.64■■■■□ 3.78
TBC1D1-205ENST00000406664 EIF4G1Q04637 1599 aaKnown RBP38.12■■■■□ 3.69
TBC1D1-205ENST00000406664 CC2D2AQ9P2K1 1620 aa38.01■■■■□ 3.68
TBC1D1-205ENST00000406664 CECR2Q9BXF3 1484 aa37.73■■■■□ 3.63
TBC1D1-205ENST00000406664 SMARCA4P51532 1647 aa37.32■■■■□ 3.57
TBC1D1-205ENST00000406664 BAZ1AQ9NRL2 1556 aaPredicted RBP37.24■■■■□ 3.55
TBC1D1-205ENST00000406664 NCAPD3P42695 1498 aa37.14■■■■□ 3.54
TBC1D1-205ENST00000406664 ATAD2BQ9ULI0 1458 aa37.13■■■■□ 3.53
TBC1D1-205ENST00000406664 SMARCA2P51531 1590 aa37.1■■■■□ 3.53
TBC1D1-205ENST00000406664 PEG3Q9GZU2 1588 aa37■■■■□ 3.51
TBC1D1-205ENST00000406664 HMGXB3Q12766 1538 aa36.99■■■■□ 3.51
TBC1D1-205ENST00000406664 MROH2BQ7Z745 1585 aa36.98■■■■□ 3.51
TBC1D1-205ENST00000406664 BAZ1BQ9UIG0 1483 aaKnown RBP36.8■■■■□ 3.48
TBC1D1-205ENST00000406664 WIZO95785 1651 aa36.61■■■■□ 3.45
TBC1D1-205ENST00000406664 RSF1Q96T23 1441 aaPredicted RBP36.48■■■■□ 3.43
TBC1D1-205ENST00000406664 NESP48681 1621 aa36.26■■■■□ 3.4
TBC1D1-205ENST00000406664 LAMC3Q9Y6N6 1575 aa36.22■■■■□ 3.39
TBC1D1-205ENST00000406664 TOP2AP11388 1531 aaKnown RBP36.2■■■■□ 3.39
TBC1D1-205ENST00000406664 ERCC6Q03468 1493 aa36.17■■■■□ 3.38
TBC1D1-205ENST00000406664 CADPSQ9ULU8 1353 aa36.01■■■■□ 3.35
TBC1D1-205ENST00000406664 KIF21AQ7Z4S6 1674 aa35.93■■■■□ 3.34
TBC1D1-205ENST00000406664 CUX2O14529 1486 aa35.92■■■■□ 3.34
TBC1D1-205ENST00000406664 PDS5BQ9NTI5 1447 aa35.92■■■■□ 3.34
TBC1D1-205ENST00000406664 THOC2Q8NI27 1593 aaKnown RBP35.85■■■■□ 3.33
TBC1D1-205ENST00000406664 CFTRP13569 1480 aa35.8■■■■□ 3.32
TBC1D1-205ENST00000406664 CCDC88BA6NC98 1476 aa35.74■■■■□ 3.31
TBC1D1-205ENST00000406664 PRDM2Q13029 1718 aa35.66■■■■□ 3.3
TBC1D1-205ENST00000406664 FANCD2Q9BXW9 1451 aa35.61■■■■□ 3.29
TBC1D1-205ENST00000406664 MRC2Q9UBG0 1479 aa35.59■■■■□ 3.29
TBC1D1-205ENST00000406664 CEP164Q9UPV0 1460 aa35.59■■■■□ 3.29
TBC1D1-205ENST00000406664 WDR62O43379 1518 aa35.52■■■■□ 3.28
TBC1D1-205ENST00000406664 SUPT5HO00267 1087 aaKnown RBP35.29■■■■□ 3.24
TBC1D1-205ENST00000406664 URB2Q14146 1524 aaKnown RBP35.28■■■■□ 3.24
TBC1D1-205ENST00000406664 TOPBP1Q92547 1522 aa35.04■■■■□ 3.2
TBC1D1-205ENST00000406664 ABCC8Q09428 1581 aa35.04■■■■□ 3.2
TBC1D1-205ENST00000406664 DNMBPQ6XZF7 1577 aa35.01■■■■□ 3.2
TBC1D1-205ENST00000406664 DNAJC5Q9H3Z4 198 aa34.96■■■■□ 3.19
TBC1D1-205ENST00000406664 IFT140Q96RY7 1462 aa34.85■■■■□ 3.17
TBC1D1-205ENST00000406664 POLA1P09884 1462 aaPredicted RBP34.72■■■■□ 3.15
TBC1D1-205ENST00000406664 CUX1P39880 1505 aa34.72■■■■□ 3.15
TBC1D1-205ENST00000406664 TARBP1Q13395 1621 aaKnown RBP34.72■■■■□ 3.15
TBC1D1-205ENST00000406664 ZNF608Q9ULD9 1512 aaPredicted RBP34.7■■■■□ 3.14
TBC1D1-205ENST00000406664 EIF4G3O43432 1585 aaKnown RBP34.61■■■■□ 3.13
TBC1D1-205ENST00000406664 FGD5Q6ZNL6 1462 aa34.6■■■■□ 3.13
TBC1D1-205ENST00000406664 RAD54L2Q9Y4B4 1467 aa34.54■■■■□ 3.12
TBC1D1-205ENST00000406664 SOGA1O94964 1423 aa34.54■■■■□ 3.12
TBC1D1-205ENST00000406664 WDR97A6NE52 1622 aa34.47■■■■□ 3.11
TBC1D1-205ENST00000406664 AQRO60306 1485 aaKnown RBP eCLIP34.46■■■■□ 3.11
TBC1D1-205ENST00000406664 BIVM-ERCC5R4GMW8 1640 aa34.43■■■■□ 3.1
TBC1D1-205ENST00000406664 TOP2BQ02880 1626 aa34.4■■■■□ 3.1
TBC1D1-205ENST00000406664 WRNQ14191 1432 aaPredicted RBP eCLIP34.38■■■■□ 3.09
TBC1D1-205ENST00000406664 SYNJ1O43426 1573 aa34.36■■■■□ 3.09
TBC1D1-205ENST00000406664 TDRD9Q8NDG6 1382 aaKnown RBP34.34■■■■□ 3.09
TBC1D1-205ENST00000406664 OSCARQ8IYS5 282 aa34.3■■■■□ 3.08
TBC1D1-205ENST00000406664 ABCA10Q8WWZ4 1543 aa34.3■■■■□ 3.08
TBC1D1-205ENST00000406664 CHD1O14646 1710 aa34.24■■■■□ 3.07
TBC1D1-205ENST00000406664 ABCA5Q8WWZ7 1642 aa34.21■■■■□ 3.07
TBC1D1-205ENST00000406664 PBRM1Q86U86 1689 aa34.2■■■■□ 3.07
TBC1D1-205ENST00000406664 GRIN2BQ13224 1484 aa34.19■■■■□ 3.06
TBC1D1-205ENST00000406664 GAPVD1Q14C86 1478 aa34.16■■■■□ 3.06
TBC1D1-205ENST00000406664 SNAPC4Q5SXM2 1469 aa34.15■■■■□ 3.06
TBC1D1-205ENST00000406664 MAGI1Q96QZ7 1491 aaPredicted RBP34.14■■■■□ 3.06
TBC1D1-205ENST00000406664 FBLN2P98095 1184 aa33.99■■■■□ 3.03
TBC1D1-205ENST00000406664 SYNJ2O15056 1496 aa33.99■■■■□ 3.03
TBC1D1-205ENST00000406664 CHMP7Q8WUX9 453 aaPredicted RBP33.91■■■■□ 3.02
TBC1D1-205ENST00000406664 ERICH3Q5RHP9 1530 aa33.89■■■■□ 3.02
TBC1D1-205ENST00000406664 RIMBP3CA6NJZ7 1639 aa33.88■■■■□ 3.01
TBC1D1-205ENST00000406664 RIMBP3BA6NNM3 1639 aa33.88■■■■□ 3.01
TBC1D1-205ENST00000406664 RIMBP3Q9UFD9 1639 aa33.88■■■■□ 3.01
TBC1D1-205ENST00000406664 ADAMTS12P58397 1594 aa33.88■■■■□ 3.01
TBC1D1-205ENST00000406664 CLASP1Q7Z460 1538 aa33.84■■■■□ 3.01
TBC1D1-205ENST00000406664 ARHGEF11O15085 1522 aa33.83■■■■□ 3.01
TBC1D1-205ENST00000406664 FHAD1B1AJZ9 1412 aa33.76■■■□□ 2.99
TBC1D1-205ENST00000406664 GRIN2AQ12879 1464 aa33.76■■■□□ 2.99
TBC1D1-205ENST00000406664 KIF27Q86VH2 1401 aa33.68■■■□□ 2.98
TBC1D1-205ENST00000406664 TRIM41Q8WV44 630 aa33.65■■■□□ 2.98
TBC1D1-205ENST00000406664 NUP160Q12769 1436 aa33.63■■■□□ 2.97
TBC1D1-205ENST00000406664 CEP170Q5SW79 1584 aa33.62■■■□□ 2.97
TBC1D1-205ENST00000406664 CUL7Q14999 1698 aa33.58■■■□□ 2.97
TBC1D1-205ENST00000406664 IGF1RP08069 1367 aa33.56■■■□□ 2.96
TBC1D1-205ENST00000406664 ARAP1Q96P48 1450 aa33.54■■■□□ 2.96
TBC1D1-205ENST00000406664 SHROOM2Q13796 1616 aa33.46■■■□□ 2.95
TBC1D1-205ENST00000406664 CYB5RLQ6IPT4 315 aa33.41■■■□□ 2.94
TBC1D1-205ENST00000406664 RUSC2Q8N2Y8 1516 aa33.38■■■□□ 2.93
TBC1D1-205ENST00000406664 CARMIL1Q5VZK9 1371 aa33.35■■■□□ 2.93
TBC1D1-205ENST00000406664 ERCC6L2Q5T890 1561 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms