RNA–Protein interactions for RNA: ENST00000406419.1

CRABP1-202, Transcript of cellular retinoic acid binding protein 1, humanhuman

TSL 5

Gene CRABP1, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRABP1-202ENST00000406419 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
CRABP1-202ENST00000406419 CCDC180Q9P1Z9 1646 aa27.88■■■□□ 2.05
CRABP1-202ENST00000406419 ABCC9O60706 1549 aa27.85■■■□□ 2.05
CRABP1-202ENST00000406419 RB1CC1Q8TDY2 1594 aa26.54■■□□□ 1.84
CRABP1-202ENST00000406419 NACADO15069 1562 aa26.38■■□□□ 1.81
CRABP1-202ENST00000406419 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
CRABP1-202ENST00000406419 DNAJC5BQ9UF47 199 aa26.15■■□□□ 1.78
CRABP1-202ENST00000406419 MYO15BQ96JP2 1530 aa26.06■■□□□ 1.76
CRABP1-202ENST00000406419 PABPN1Q86U42 306 aaKnown RBP eCLIP25.95■■□□□ 1.74
CRABP1-202ENST00000406419 UNC13AQ9UPW8 1703 aa25.89■■□□□ 1.74
CRABP1-202ENST00000406419 BICRAQ9NZM4 1560 aa25.75■■□□□ 1.71
CRABP1-202ENST00000406419 ZCCHC6Q5VYS8 1495 aaKnown RBP25.75■■□□□ 1.71
CRABP1-202ENST00000406419 DCAF1Q9Y4B6 1507 aa25.72■■□□□ 1.71
CRABP1-202ENST00000406419 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
CRABP1-202ENST00000406419 SCRIBQ14160 1630 aa25.36■■□□□ 1.65
CRABP1-202ENST00000406419 CC2D2AQ9P2K1 1620 aa25.16■■□□□ 1.62
CRABP1-202ENST00000406419 EIF4G1Q04637 1599 aaKnown RBP25.12■■□□□ 1.61
CRABP1-202ENST00000406419 CECR2Q9BXF3 1484 aa25.11■■□□□ 1.61
CRABP1-202ENST00000406419 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
CRABP1-202ENST00000406419 ATAD2BQ9ULI0 1458 aa24.27■■□□□ 1.48
CRABP1-202ENST00000406419 SMARCA4P51532 1647 aa24.22■■□□□ 1.47
CRABP1-202ENST00000406419 SMARCA2P51531 1590 aa24.21■■□□□ 1.47
CRABP1-202ENST00000406419 HMGXB3Q12766 1538 aa24.17■■□□□ 1.46
CRABP1-202ENST00000406419 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
CRABP1-202ENST00000406419 ERCC6Q03468 1493 aa24.07■■□□□ 1.44
CRABP1-202ENST00000406419 CUX2O14529 1486 aa24.06■■□□□ 1.44
CRABP1-202ENST00000406419 DNAJC5Q9H3Z4 198 aa24.05■■□□□ 1.44
CRABP1-202ENST00000406419 BAZ1BQ9UIG0 1483 aaKnown RBP24.03■■□□□ 1.44
CRABP1-202ENST00000406419 PEG3Q9GZU2 1588 aa24.03■■□□□ 1.44
CRABP1-202ENST00000406419 MROH2BQ7Z745 1585 aa23.93■■□□□ 1.42
CRABP1-202ENST00000406419 NESP48681 1621 aa23.92■■□□□ 1.42
CRABP1-202ENST00000406419 LAMC3Q9Y6N6 1575 aa23.79■■□□□ 1.4
CRABP1-202ENST00000406419 PDS5BQ9NTI5 1447 aa23.68■■□□□ 1.38
CRABP1-202ENST00000406419 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
CRABP1-202ENST00000406419 CADPSQ9ULU8 1353 aa23.64■■□□□ 1.37
CRABP1-202ENST00000406419 WIZO95785 1651 aa23.63■■□□□ 1.37
CRABP1-202ENST00000406419 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
CRABP1-202ENST00000406419 RSF1Q96T23 1441 aaPredicted RBP23.47■■□□□ 1.35
CRABP1-202ENST00000406419 MRC2Q9UBG0 1479 aa23.44■■□□□ 1.34
CRABP1-202ENST00000406419 WDR62O43379 1518 aa23.38■■□□□ 1.33
CRABP1-202ENST00000406419 CFTRP13569 1480 aa23.36■■□□□ 1.33
CRABP1-202ENST00000406419 TOP2AP11388 1531 aaKnown RBP23.35■■□□□ 1.33
CRABP1-202ENST00000406419 CEP164Q9UPV0 1460 aa23.35■■□□□ 1.33
CRABP1-202ENST00000406419 FANCD2Q9BXW9 1451 aa23.33■■□□□ 1.33
CRABP1-202ENST00000406419 URB2Q14146 1524 aaKnown RBP23.13■■□□□ 1.29
CRABP1-202ENST00000406419 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
CRABP1-202ENST00000406419 PRDM2Q13029 1718 aa23.07■■□□□ 1.28
CRABP1-202ENST00000406419 OSCARQ8IYS5 282 aa22.98■■□□□ 1.27
CRABP1-202ENST00000406419 TRIM41Q8WV44 630 aa22.93■■□□□ 1.26
CRABP1-202ENST00000406419 IFT140Q96RY7 1462 aa22.91■■□□□ 1.26
CRABP1-202ENST00000406419 TOPBP1Q92547 1522 aa22.89■■□□□ 1.26
CRABP1-202ENST00000406419 ABCC8Q09428 1581 aa22.89■■□□□ 1.25
CRABP1-202ENST00000406419 ZNF608Q9ULD9 1512 aaPredicted RBP22.83■■□□□ 1.25
CRABP1-202ENST00000406419 DNMBPQ6XZF7 1577 aa22.8■■□□□ 1.24
CRABP1-202ENST00000406419 EIF4G3O43432 1585 aaKnown RBP22.68■■□□□ 1.22
CRABP1-202ENST00000406419 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
CRABP1-202ENST00000406419 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
CRABP1-202ENST00000406419 AQRO60306 1485 aaKnown RBP eCLIP22.64■■□□□ 1.21
CRABP1-202ENST00000406419 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
CRABP1-202ENST00000406419 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
CRABP1-202ENST00000406419 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
CRABP1-202ENST00000406419 SOGA1O94964 1423 aa22.57■■□□□ 1.2
CRABP1-202ENST00000406419 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
CRABP1-202ENST00000406419 ARHGEF11O15085 1522 aa22.56■■□□□ 1.2
CRABP1-202ENST00000406419 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
CRABP1-202ENST00000406419 CHD1O14646 1710 aa22.51■■□□□ 1.19
CRABP1-202ENST00000406419 FGD5Q6ZNL6 1462 aa22.5■■□□□ 1.19
CRABP1-202ENST00000406419 FBLN2P98095 1184 aa22.5■■□□□ 1.19
CRABP1-202ENST00000406419 CUX1P39880 1505 aa22.48■■□□□ 1.19
CRABP1-202ENST00000406419 WDR97A6NE52 1622 aa22.48■■□□□ 1.19
CRABP1-202ENST00000406419 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
CRABP1-202ENST00000406419 CYB5RLQ6IPT4 315 aa22.41■■□□□ 1.18
CRABP1-202ENST00000406419 SNAPC4Q5SXM2 1469 aa22.4■■□□□ 1.18
CRABP1-202ENST00000406419 GRIN2BQ13224 1484 aa22.37■■□□□ 1.17
CRABP1-202ENST00000406419 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
CRABP1-202ENST00000406419 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
CRABP1-202ENST00000406419 ARAP1Q96P48 1450 aa22.33■■□□□ 1.16
CRABP1-202ENST00000406419 SYNJ2O15056 1496 aa22.29■■□□□ 1.16
CRABP1-202ENST00000406419 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
CRABP1-202ENST00000406419 CLASP1Q7Z460 1538 aa22.29■■□□□ 1.16
CRABP1-202ENST00000406419 SYNJ1O43426 1573 aa22.29■■□□□ 1.16
CRABP1-202ENST00000406419 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
CRABP1-202ENST00000406419 PBRM1Q86U86 1689 aa22.23■■□□□ 1.15
CRABP1-202ENST00000406419 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.15
CRABP1-202ENST00000406419 WRNQ14191 1432 aaPredicted RBP eCLIP22.2■■□□□ 1.14
CRABP1-202ENST00000406419 TRHP20396 242 aaPredicted RBP22.15■■□□□ 1.14
CRABP1-202ENST00000406419 TOP2BQ02880 1626 aa22.13■■□□□ 1.13
CRABP1-202ENST00000406419 BIVM-ERCC5R4GMW8 1640 aa22.13■■□□□ 1.13
CRABP1-202ENST00000406419 GRIN2AQ12879 1464 aa22.07■■□□□ 1.12
CRABP1-202ENST00000406419 ADAMTS12P58397 1594 aa22.03■■□□□ 1.12
CRABP1-202ENST00000406419 FHAD1B1AJZ9 1412 aa22.02■■□□□ 1.12
CRABP1-202ENST00000406419 NUP160Q12769 1436 aa22.01■■□□□ 1.11
CRABP1-202ENST00000406419 ERICH3Q5RHP9 1530 aa22■■□□□ 1.11
CRABP1-202ENST00000406419 CEP170Q5SW79 1584 aa21.96■■□□□ 1.11
CRABP1-202ENST00000406419 ERCC6L2Q5T890 1561 aa21.91■■□□□ 1.1
CRABP1-202ENST00000406419 SHROOM2Q13796 1616 aa21.89■■□□□ 1.09
CRABP1-202ENST00000406419 JPH4Q96JJ6 628 aa21.81■■□□□ 1.08
CRABP1-202ENST00000406419 PRG4Q92954 1404 aaPredicted RBP21.8■■□□□ 1.08
CRABP1-202ENST00000406419 IGF1RP08069 1367 aa21.74■■□□□ 1.07
CRABP1-202ENST00000406419 KIF27Q86VH2 1401 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms