RNA–Protein interactions for RNA: ENST00000406170.1

BRD7P4-201, Transcript of bromodomain containing 7 pseudogene 4, humanhuman

BASIC

Gene BRD7P4, Length 1,522 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD7P4-201ENST00000406170 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
BRD7P4-201ENST00000406170 CHIC1Q5VXU3 224 aa23.55■■□□□ 1.36
BRD7P4-201ENST00000406170 NISCHQ9Y2I1 1504 aa22.75■■□□□ 1.23
BRD7P4-201ENST00000406170 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
BRD7P4-201ENST00000406170 PHF23Q9BUL5 403 aaPredicted RBP21.19■□□□□ 0.98
BRD7P4-201ENST00000406170 ABCC9O60706 1549 aa21■□□□□ 0.95
BRD7P4-201ENST00000406170 CCDC180Q9P1Z9 1646 aa20.58■□□□□ 0.88
BRD7P4-201ENST00000406170 FOXD1Q16676 465 aa20.17■□□□□ 0.82
BRD7P4-201ENST00000406170 DNAJC5BQ9UF47 199 aa20.06■□□□□ 0.8
BRD7P4-201ENST00000406170 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
BRD7P4-201ENST00000406170 POTEDQ86YR6 584 aa19.6■□□□□ 0.73
BRD7P4-201ENST00000406170 NACADO15069 1562 aa19.57■□□□□ 0.72
BRD7P4-201ENST00000406170 PABPN1Q86U42 306 aaKnown RBP eCLIP19.51■□□□□ 0.71
BRD7P4-201ENST00000406170 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
BRD7P4-201ENST00000406170 UNC13AQ9UPW8 1703 aa19.29■□□□□ 0.68
BRD7P4-201ENST00000406170 BICRAQ9NZM4 1560 aa19.21■□□□□ 0.67
BRD7P4-201ENST00000406170 MYO15BQ96JP2 1530 aa19.17■□□□□ 0.66
BRD7P4-201ENST00000406170 MSH5O43196 834 aa19.14■□□□□ 0.65
BRD7P4-201ENST00000406170 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
BRD7P4-201ENST00000406170 SHROOM4Q9ULL8 1493 aa18.96■□□□□ 0.63
BRD7P4-201ENST00000406170 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
BRD7P4-201ENST00000406170 EIF4G1Q04637 1599 aaKnown RBP18.8■□□□□ 0.6
BRD7P4-201ENST00000406170 DCAF1Q9Y4B6 1507 aa18.78■□□□□ 0.6
BRD7P4-201ENST00000406170 ZCCHC6Q5VYS8 1495 aaKnown RBP18.76■□□□□ 0.59
BRD7P4-201ENST00000406170 DNAJC5Q9H3Z4 198 aa18.74■□□□□ 0.59
BRD7P4-201ENST00000406170 SCRIBQ14160 1630 aa18.73■□□□□ 0.59
BRD7P4-201ENST00000406170 PIAS4Q8N2W9 510 aaPredicted RBP18.69■□□□□ 0.58
BRD7P4-201ENST00000406170 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
BRD7P4-201ENST00000406170 PPP6R1Q9UPN7 881 aa18.39■□□□□ 0.53
BRD7P4-201ENST00000406170 ADRA2BP18089 450 aa18.28■□□□□ 0.52
BRD7P4-201ENST00000406170 CUX2O14529 1486 aa18.28■□□□□ 0.52
BRD7P4-201ENST00000406170 ERCC6Q03468 1493 aa18.19■□□□□ 0.5
BRD7P4-201ENST00000406170 NCAPD3P42695 1498 aa18.08■□□□□ 0.49
BRD7P4-201ENST00000406170 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
BRD7P4-201ENST00000406170 NESP48681 1621 aa17.9■□□□□ 0.46
BRD7P4-201ENST00000406170 SMARCA2P51531 1590 aa17.9■□□□□ 0.46
BRD7P4-201ENST00000406170 HMGXB3Q12766 1538 aa17.89■□□□□ 0.46
BRD7P4-201ENST00000406170 SMARCA4P51532 1647 aa17.82■□□□□ 0.44
BRD7P4-201ENST00000406170 THOC2Q8NI27 1593 aaKnown RBP17.79■□□□□ 0.44
BRD7P4-201ENST00000406170 BAZ1BQ9UIG0 1483 aaKnown RBP17.78■□□□□ 0.44
BRD7P4-201ENST00000406170 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
BRD7P4-201ENST00000406170 LAMC3Q9Y6N6 1575 aa17.74■□□□□ 0.43
BRD7P4-201ENST00000406170 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
BRD7P4-201ENST00000406170 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
BRD7P4-201ENST00000406170 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
BRD7P4-201ENST00000406170 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.41
BRD7P4-201ENST00000406170 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
BRD7P4-201ENST00000406170 MRC2Q9UBG0 1479 aa17.53■□□□□ 0.4
BRD7P4-201ENST00000406170 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.39
BRD7P4-201ENST00000406170 WDR62O43379 1518 aa17.48■□□□□ 0.39
BRD7P4-201ENST00000406170 OSCARQ8IYS5 282 aa17.41■□□□□ 0.38
BRD7P4-201ENST00000406170 CEP164Q9UPV0 1460 aa17.38■□□□□ 0.37
BRD7P4-201ENST00000406170 FANCD2Q9BXW9 1451 aa17.32■□□□□ 0.36
BRD7P4-201ENST00000406170 WIZO95785 1651 aa17.27■□□□□ 0.36
BRD7P4-201ENST00000406170 CFTRP13569 1480 aa17.22■□□□□ 0.35
BRD7P4-201ENST00000406170 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
BRD7P4-201ENST00000406170 RIMBP3CA6NJZ7 1639 aa17.17■□□□□ 0.34
BRD7P4-201ENST00000406170 RIMBP3BA6NNM3 1639 aa17.17■□□□□ 0.34
BRD7P4-201ENST00000406170 RIMBP3Q9UFD9 1639 aa17.17■□□□□ 0.34
BRD7P4-201ENST00000406170 RSF1Q96T23 1441 aaPredicted RBP17.12■□□□□ 0.33
BRD7P4-201ENST00000406170 ARHGEF11O15085 1522 aa17.08■□□□□ 0.33
BRD7P4-201ENST00000406170 TOP2AP11388 1531 aaKnown RBP17.05■□□□□ 0.32
BRD7P4-201ENST00000406170 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
BRD7P4-201ENST00000406170 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
BRD7P4-201ENST00000406170 ZNF608Q9ULD9 1512 aaPredicted RBP17.03■□□□□ 0.32
BRD7P4-201ENST00000406170 CYB5RLQ6IPT4 315 aa17.02■□□□□ 0.32
BRD7P4-201ENST00000406170 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
BRD7P4-201ENST00000406170 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
BRD7P4-201ENST00000406170 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
BRD7P4-201ENST00000406170 TOPBP1Q92547 1522 aa16.93■□□□□ 0.3
BRD7P4-201ENST00000406170 EIF4G3O43432 1585 aaKnown RBP16.92■□□□□ 0.3
BRD7P4-201ENST00000406170 ABCC8Q09428 1581 aa16.9■□□□□ 0.3
BRD7P4-201ENST00000406170 ARAP1Q96P48 1450 aa16.89■□□□□ 0.29
BRD7P4-201ENST00000406170 CCDC88BA6NC98 1476 aa16.87■□□□□ 0.29
BRD7P4-201ENST00000406170 FBLN2P98095 1184 aa16.86■□□□□ 0.29
BRD7P4-201ENST00000406170 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.29
BRD7P4-201ENST00000406170 CHD1O14646 1710 aa16.85■□□□□ 0.29
BRD7P4-201ENST00000406170 DNMBPQ6XZF7 1577 aa16.83■□□□□ 0.29
BRD7P4-201ENST00000406170 TARBP1Q13395 1621 aaKnown RBP16.79■□□□□ 0.28
BRD7P4-201ENST00000406170 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
BRD7P4-201ENST00000406170 SUPT5HO00267 1087 aaKnown RBP16.78■□□□□ 0.28
BRD7P4-201ENST00000406170 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
BRD7P4-201ENST00000406170 CACNB1Q02641 598 aaPredicted RBP16.7■□□□□ 0.26
BRD7P4-201ENST00000406170 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
BRD7P4-201ENST00000406170 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
BRD7P4-201ENST00000406170 SOGA1O94964 1423 aa16.67■□□□□ 0.26
BRD7P4-201ENST00000406170 CLASP1Q7Z460 1538 aa16.67■□□□□ 0.26
BRD7P4-201ENST00000406170 CHMP7Q8WUX9 453 aaPredicted RBP16.67■□□□□ 0.26
BRD7P4-201ENST00000406170 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
BRD7P4-201ENST00000406170 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
BRD7P4-201ENST00000406170 WDR97A6NE52 1622 aa16.62■□□□□ 0.25
BRD7P4-201ENST00000406170 MAGI1Q96QZ7 1491 aaPredicted RBP16.61■□□□□ 0.25
BRD7P4-201ENST00000406170 GRIN2BQ13224 1484 aa16.57■□□□□ 0.24
BRD7P4-201ENST00000406170 FGD5Q6ZNL6 1462 aa16.57■□□□□ 0.24
BRD7P4-201ENST00000406170 SYNJ2O15056 1496 aa16.56■□□□□ 0.24
BRD7P4-201ENST00000406170 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
BRD7P4-201ENST00000406170 CUX1P39880 1505 aa16.48■□□□□ 0.23
BRD7P4-201ENST00000406170 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
BRD7P4-201ENST00000406170 ERCC6L2Q5T890 1561 aa16.37■□□□□ 0.21
BRD7P4-201ENST00000406170 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms