RNA–Protein interactions for RNA: ENST00000405444.3

TBC1D1-204, Transcript of TBC1 domain family member 1, humanhuman

TSL 4

Gene TBC1D1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-204ENST00000405444 NISCHQ9Y2I1 1504 aa41.93■■■■■ 4.3
TBC1D1-204ENST00000405444 CCDC180Q9P1Z9 1646 aa37.6■■■■□ 3.61
TBC1D1-204ENST00000405444 ABCC9O60706 1549 aa37.19■■■■□ 3.54
TBC1D1-204ENST00000405444 RB1CC1Q8TDY2 1594 aa35.65■■■■□ 3.3
TBC1D1-204ENST00000405444 NACADO15069 1562 aa35.49■■■■□ 3.27
TBC1D1-204ENST00000405444 MYO15BQ96JP2 1530 aa35.15■■■■□ 3.22
TBC1D1-204ENST00000405444 DCAF8L2P0C7V8 631 aa35.14■■■■□ 3.22
TBC1D1-204ENST00000405444 ZCCHC6Q5VYS8 1495 aaKnown RBP34.82■■■■□ 3.16
TBC1D1-204ENST00000405444 DCAF1Q9Y4B6 1507 aa34.76■■■■□ 3.15
TBC1D1-204ENST00000405444 UNC13AQ9UPW8 1703 aa34.74■■■■□ 3.15
TBC1D1-204ENST00000405444 PABPN1Q86U42 306 aaKnown RBP eCLIP34.61■■■■□ 3.13
TBC1D1-204ENST00000405444 DNAJC5BQ9UF47 199 aa34.59■■■■□ 3.13
TBC1D1-204ENST00000405444 BICRAQ9NZM4 1560 aa34.51■■■■□ 3.12
TBC1D1-204ENST00000405444 SHROOM4Q9ULL8 1493 aa34.28■■■■□ 3.08
TBC1D1-204ENST00000405444 SCRIBQ14160 1630 aa34.13■■■■□ 3.05
TBC1D1-204ENST00000405444 EIF4G1Q04637 1599 aaKnown RBP33.68■■■□□ 2.98
TBC1D1-204ENST00000405444 CC2D2AQ9P2K1 1620 aa33.67■■■□□ 2.98
TBC1D1-204ENST00000405444 CECR2Q9BXF3 1484 aa33.54■■■□□ 2.96
TBC1D1-204ENST00000405444 NCAPD3P42695 1498 aa32.73■■■□□ 2.83
TBC1D1-204ENST00000405444 SMARCA4P51532 1647 aa32.65■■■□□ 2.82
TBC1D1-204ENST00000405444 ATAD2BQ9ULI0 1458 aa32.62■■■□□ 2.81
TBC1D1-204ENST00000405444 SMARCA2P51531 1590 aa32.61■■■□□ 2.81
TBC1D1-204ENST00000405444 BAZ1AQ9NRL2 1556 aaPredicted RBP32.58■■■□□ 2.81
TBC1D1-204ENST00000405444 HMGXB3Q12766 1538 aa32.54■■■□□ 2.8
TBC1D1-204ENST00000405444 PEG3Q9GZU2 1588 aa32.41■■■□□ 2.78
TBC1D1-204ENST00000405444 BAZ1BQ9UIG0 1483 aaKnown RBP32.33■■■□□ 2.77
TBC1D1-204ENST00000405444 MROH2BQ7Z745 1585 aa32.24■■■□□ 2.75
TBC1D1-204ENST00000405444 ERCC6Q03468 1493 aa32.16■■■□□ 2.74
TBC1D1-204ENST00000405444 CUX2O14529 1486 aa32.1■■■□□ 2.73
TBC1D1-204ENST00000405444 NESP48681 1621 aa32■■■□□ 2.71
TBC1D1-204ENST00000405444 LAMC3Q9Y6N6 1575 aa31.97■■■□□ 2.71
TBC1D1-204ENST00000405444 WIZO95785 1651 aa31.86■■■□□ 2.69
TBC1D1-204ENST00000405444 PDS5BQ9NTI5 1447 aa31.78■■■□□ 2.68
TBC1D1-204ENST00000405444 CADPSQ9ULU8 1353 aa31.72■■■□□ 2.67
TBC1D1-204ENST00000405444 THOC2Q8NI27 1593 aaKnown RBP31.72■■■□□ 2.67
TBC1D1-204ENST00000405444 DNAJC5Q9H3Z4 198 aa31.71■■■□□ 2.67
TBC1D1-204ENST00000405444 RSF1Q96T23 1441 aaPredicted RBP31.69■■■□□ 2.66
TBC1D1-204ENST00000405444 KIF21AQ7Z4S6 1674 aa31.64■■■□□ 2.65
TBC1D1-204ENST00000405444 TOP2AP11388 1531 aaKnown RBP31.56■■■□□ 2.64
TBC1D1-204ENST00000405444 MRC2Q9UBG0 1479 aa31.45■■■□□ 2.62
TBC1D1-204ENST00000405444 CFTRP13569 1480 aa31.42■■■□□ 2.62
TBC1D1-204ENST00000405444 CEP164Q9UPV0 1460 aa31.38■■■□□ 2.61
TBC1D1-204ENST00000405444 WDR62O43379 1518 aa31.38■■■□□ 2.61
TBC1D1-204ENST00000405444 FANCD2Q9BXW9 1451 aa31.34■■■□□ 2.61
TBC1D1-204ENST00000405444 PRDM2Q13029 1718 aa31.15■■■□□ 2.58
TBC1D1-204ENST00000405444 CCDC88BA6NC98 1476 aa31.14■■■□□ 2.58
TBC1D1-204ENST00000405444 URB2Q14146 1524 aaKnown RBP31.03■■■□□ 2.56
TBC1D1-204ENST00000405444 ABCC8Q09428 1581 aa30.83■■■□□ 2.53
TBC1D1-204ENST00000405444 TOPBP1Q92547 1522 aa30.78■■■□□ 2.52
TBC1D1-204ENST00000405444 IFT140Q96RY7 1462 aa30.76■■■□□ 2.52
TBC1D1-204ENST00000405444 DNMBPQ6XZF7 1577 aa30.71■■■□□ 2.51
TBC1D1-204ENST00000405444 OSCARQ8IYS5 282 aa30.62■■■□□ 2.49
TBC1D1-204ENST00000405444 ZNF608Q9ULD9 1512 aaPredicted RBP30.57■■■□□ 2.49
TBC1D1-204ENST00000405444 EIF4G3O43432 1585 aaKnown RBP30.48■■■□□ 2.47
TBC1D1-204ENST00000405444 TARBP1Q13395 1621 aaKnown RBP30.47■■■□□ 2.47
TBC1D1-204ENST00000405444 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
TBC1D1-204ENST00000405444 SUPT5HO00267 1087 aaKnown RBP30.37■■■□□ 2.45
TBC1D1-204ENST00000405444 SOGA1O94964 1423 aa30.34■■■□□ 2.45
TBC1D1-204ENST00000405444 WDR97A6NE52 1622 aa30.33■■■□□ 2.45
TBC1D1-204ENST00000405444 AQRO60306 1485 aaKnown RBP eCLIP30.33■■■□□ 2.45
TBC1D1-204ENST00000405444 TRIM41Q8WV44 630 aa30.32■■■□□ 2.44
TBC1D1-204ENST00000405444 CUX1P39880 1505 aa30.3■■■□□ 2.44
TBC1D1-204ENST00000405444 FGD5Q6ZNL6 1462 aa30.3■■■□□ 2.44
TBC1D1-204ENST00000405444 RAD54L2Q9Y4B4 1467 aa30.29■■■□□ 2.44
TBC1D1-204ENST00000405444 TDRD9Q8NDG6 1382 aaKnown RBP30.18■■■□□ 2.42
TBC1D1-204ENST00000405444 CHD1O14646 1710 aa30.18■■■□□ 2.42
TBC1D1-204ENST00000405444 RIMBP3CA6NJZ7 1639 aa30.15■■■□□ 2.42
TBC1D1-204ENST00000405444 RIMBP3BA6NNM3 1639 aa30.15■■■□□ 2.42
TBC1D1-204ENST00000405444 RIMBP3Q9UFD9 1639 aa30.15■■■□□ 2.42
TBC1D1-204ENST00000405444 ARHGEF11O15085 1522 aa30.1■■■□□ 2.41
TBC1D1-204ENST00000405444 MAGI1Q96QZ7 1491 aaPredicted RBP30.09■■■□□ 2.41
TBC1D1-204ENST00000405444 GRIN2BQ13224 1484 aa30.08■■■□□ 2.41
TBC1D1-204ENST00000405444 SNAPC4Q5SXM2 1469 aa30.07■■■□□ 2.4
TBC1D1-204ENST00000405444 FBLN2P98095 1184 aa30.07■■■□□ 2.4
TBC1D1-204ENST00000405444 ABCA10Q8WWZ4 1543 aa30.03■■■□□ 2.4
TBC1D1-204ENST00000405444 GAPVD1Q14C86 1478 aa29.99■■■□□ 2.39
TBC1D1-204ENST00000405444 SYNJ2O15056 1496 aa29.96■■■□□ 2.39
TBC1D1-204ENST00000405444 CHMP7Q8WUX9 453 aaPredicted RBP29.96■■■□□ 2.39
TBC1D1-204ENST00000405444 WRNQ14191 1432 aaPredicted RBP eCLIP29.96■■■□□ 2.39
TBC1D1-204ENST00000405444 PBRM1Q86U86 1689 aa29.95■■■□□ 2.38
TBC1D1-204ENST00000405444 TOP2BQ02880 1626 aa29.94■■■□□ 2.38
TBC1D1-204ENST00000405444 ABCA5Q8WWZ7 1642 aa29.94■■■□□ 2.38
TBC1D1-204ENST00000405444 BIVM-ERCC5R4GMW8 1640 aa29.94■■■□□ 2.38
TBC1D1-204ENST00000405444 SYNJ1O43426 1573 aa29.93■■■□□ 2.38
TBC1D1-204ENST00000405444 CLASP1Q7Z460 1538 aa29.89■■■□□ 2.38
TBC1D1-204ENST00000405444 ARAP1Q96P48 1450 aa29.8■■■□□ 2.36
TBC1D1-204ENST00000405444 CYB5RLQ6IPT4 315 aa29.8■■■□□ 2.36
TBC1D1-204ENST00000405444 ADAMTS12P58397 1594 aa29.69■■■□□ 2.34
TBC1D1-204ENST00000405444 ERICH3Q5RHP9 1530 aa29.68■■■□□ 2.34
TBC1D1-204ENST00000405444 GRIN2AQ12879 1464 aa29.68■■■□□ 2.34
TBC1D1-204ENST00000405444 FHAD1B1AJZ9 1412 aa29.64■■■□□ 2.34
TBC1D1-204ENST00000405444 NUP160Q12769 1436 aa29.59■■■□□ 2.33
TBC1D1-204ENST00000405444 CEP170Q5SW79 1584 aa29.52■■■□□ 2.32
TBC1D1-204ENST00000405444 SHROOM2Q13796 1616 aa29.43■■■□□ 2.3
TBC1D1-204ENST00000405444 TRHP20396 242 aaPredicted RBP29.4■■■□□ 2.3
TBC1D1-204ENST00000405444 KIF27Q86VH2 1401 aa29.37■■■□□ 2.29
TBC1D1-204ENST00000405444 AEBP2Q6ZN18 517 aaPredicted RBP29.35■■■□□ 2.29
TBC1D1-204ENST00000405444 ERCC6L2Q5T890 1561 aa29.33■■■□□ 2.29
TBC1D1-204ENST00000405444 CUL7Q14999 1698 aa29.3■■■□□ 2.28
TBC1D1-204ENST00000405444 IGF1RP08069 1367 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms