RNA–Protein interactions for RNA: ENST00000405420.2

SUMF1-203, Transcript of sulfatase modifying factor 1, humanhuman

TSL 1 (best) BASIC

Gene SUMF1, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-203ENST00000405420 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
SUMF1-203ENST00000405420 CCDC180Q9P1Z9 1646 aa26.38■■□□□ 1.81
SUMF1-203ENST00000405420 ABCC9O60706 1549 aa26.24■■□□□ 1.79
SUMF1-203ENST00000405420 DCAF8L2P0C7V8 631 aa25.07■■□□□ 1.6
SUMF1-203ENST00000405420 RB1CC1Q8TDY2 1594 aa25.03■■□□□ 1.6
SUMF1-203ENST00000405420 NACADO15069 1562 aa24.94■■□□□ 1.58
SUMF1-203ENST00000405420 MYO15BQ96JP2 1530 aa24.67■■□□□ 1.54
SUMF1-203ENST00000405420 ZCCHC6Q5VYS8 1495 aaKnown RBP24.62■■□□□ 1.53
SUMF1-203ENST00000405420 PABPN1Q86U42 306 aaKnown RBP eCLIP24.56■■□□□ 1.52
SUMF1-203ENST00000405420 DCAF1Q9Y4B6 1507 aa24.47■■□□□ 1.51
SUMF1-203ENST00000405420 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
SUMF1-203ENST00000405420 UNC13AQ9UPW8 1703 aa24.39■■□□□ 1.5
SUMF1-203ENST00000405420 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
SUMF1-203ENST00000405420 SCRIBQ14160 1630 aa24.13■■□□□ 1.45
SUMF1-203ENST00000405420 SHROOM4Q9ULL8 1493 aa23.95■■□□□ 1.42
SUMF1-203ENST00000405420 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
SUMF1-203ENST00000405420 CC2D2AQ9P2K1 1620 aa23.66■■□□□ 1.38
SUMF1-203ENST00000405420 CECR2Q9BXF3 1484 aa23.6■■□□□ 1.37
SUMF1-203ENST00000405420 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
SUMF1-203ENST00000405420 ATAD2BQ9ULI0 1458 aa23.04■■□□□ 1.28
SUMF1-203ENST00000405420 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
SUMF1-203ENST00000405420 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
SUMF1-203ENST00000405420 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
SUMF1-203ENST00000405420 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
SUMF1-203ENST00000405420 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
SUMF1-203ENST00000405420 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
SUMF1-203ENST00000405420 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
SUMF1-203ENST00000405420 ERCC6Q03468 1493 aa22.62■■□□□ 1.21
SUMF1-203ENST00000405420 NESP48681 1621 aa22.62■■□□□ 1.21
SUMF1-203ENST00000405420 WIZO95785 1651 aa22.58■■□□□ 1.2
SUMF1-203ENST00000405420 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
SUMF1-203ENST00000405420 CUX2O14529 1486 aa22.44■■□□□ 1.18
SUMF1-203ENST00000405420 LAMC3Q9Y6N6 1575 aa22.44■■□□□ 1.18
SUMF1-203ENST00000405420 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
SUMF1-203ENST00000405420 PDS5BQ9NTI5 1447 aa22.37■■□□□ 1.17
SUMF1-203ENST00000405420 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
SUMF1-203ENST00000405420 DNAJC5Q9H3Z4 198 aa22.3■■□□□ 1.16
SUMF1-203ENST00000405420 KIF21AQ7Z4S6 1674 aa22.25■■□□□ 1.15
SUMF1-203ENST00000405420 THOC2Q8NI27 1593 aaKnown RBP22.25■■□□□ 1.15
SUMF1-203ENST00000405420 CFTRP13569 1480 aa22.18■■□□□ 1.14
SUMF1-203ENST00000405420 MRC2Q9UBG0 1479 aa22.13■■□□□ 1.13
SUMF1-203ENST00000405420 FANCD2Q9BXW9 1451 aa22.12■■□□□ 1.13
SUMF1-203ENST00000405420 CCDC88BA6NC98 1476 aa22.11■■□□□ 1.13
SUMF1-203ENST00000405420 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
SUMF1-203ENST00000405420 WDR62O43379 1518 aa22.03■■□□□ 1.12
SUMF1-203ENST00000405420 URB2Q14146 1524 aaKnown RBP21.91■■□□□ 1.1
SUMF1-203ENST00000405420 SUPT5HO00267 1087 aaKnown RBP21.85■■□□□ 1.09
SUMF1-203ENST00000405420 PRDM2Q13029 1718 aa21.83■■□□□ 1.08
SUMF1-203ENST00000405420 TOPBP1Q92547 1522 aa21.72■■□□□ 1.07
SUMF1-203ENST00000405420 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
SUMF1-203ENST00000405420 IFT140Q96RY7 1462 aa21.65■■□□□ 1.06
SUMF1-203ENST00000405420 DNMBPQ6XZF7 1577 aa21.64■■□□□ 1.05
SUMF1-203ENST00000405420 ZNF608Q9ULD9 1512 aaPredicted RBP21.61■■□□□ 1.05
SUMF1-203ENST00000405420 OSCARQ8IYS5 282 aa21.58■■□□□ 1.05
SUMF1-203ENST00000405420 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.04
SUMF1-203ENST00000405420 SOGA1O94964 1423 aa21.48■■□□□ 1.03
SUMF1-203ENST00000405420 AQRO60306 1485 aaKnown RBP eCLIP21.48■■□□□ 1.03
SUMF1-203ENST00000405420 RAD54L2Q9Y4B4 1467 aa21.48■■□□□ 1.03
SUMF1-203ENST00000405420 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
SUMF1-203ENST00000405420 CUX1P39880 1505 aa21.45■■□□□ 1.02
SUMF1-203ENST00000405420 FGD5Q6ZNL6 1462 aa21.44■■□□□ 1.02
SUMF1-203ENST00000405420 EIF4G3O43432 1585 aaKnown RBP21.44■■□□□ 1.02
SUMF1-203ENST00000405420 TDRD9Q8NDG6 1382 aaKnown RBP21.42■■□□□ 1.02
SUMF1-203ENST00000405420 TRIM41Q8WV44 630 aa21.38■■□□□ 1.01
SUMF1-203ENST00000405420 FBLN2P98095 1184 aa21.35■■□□□ 1.01
SUMF1-203ENST00000405420 WRNQ14191 1432 aaPredicted RBP eCLIP21.24■□□□□ 0.99
SUMF1-203ENST00000405420 WDR97A6NE52 1622 aa21.23■□□□□ 0.99
SUMF1-203ENST00000405420 GRIN2BQ13224 1484 aa21.22■□□□□ 0.99
SUMF1-203ENST00000405420 SNAPC4Q5SXM2 1469 aa21.22■□□□□ 0.99
SUMF1-203ENST00000405420 CHMP7Q8WUX9 453 aaPredicted RBP21.22■□□□□ 0.99
SUMF1-203ENST00000405420 CHD1O14646 1710 aa21.2■□□□□ 0.98
SUMF1-203ENST00000405420 GAPVD1Q14C86 1478 aa21.2■□□□□ 0.98
SUMF1-203ENST00000405420 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
SUMF1-203ENST00000405420 MAGI1Q96QZ7 1491 aaPredicted RBP21.17■□□□□ 0.98
SUMF1-203ENST00000405420 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
SUMF1-203ENST00000405420 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
SUMF1-203ENST00000405420 RIMBP3CA6NJZ7 1639 aa21.14■□□□□ 0.97
SUMF1-203ENST00000405420 RIMBP3BA6NNM3 1639 aa21.14■□□□□ 0.97
SUMF1-203ENST00000405420 RIMBP3Q9UFD9 1639 aa21.14■□□□□ 0.97
SUMF1-203ENST00000405420 ARHGEF11O15085 1522 aa21.14■□□□□ 0.97
SUMF1-203ENST00000405420 BIVM-ERCC5R4GMW8 1640 aa21.13■□□□□ 0.97
SUMF1-203ENST00000405420 SYNJ2O15056 1496 aa21.11■□□□□ 0.97
SUMF1-203ENST00000405420 ABCA5Q8WWZ7 1642 aa21.08■□□□□ 0.97
SUMF1-203ENST00000405420 CYB5RLQ6IPT4 315 aa21.08■□□□□ 0.97
SUMF1-203ENST00000405420 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
SUMF1-203ENST00000405420 CLASP1Q7Z460 1538 aa21■□□□□ 0.95
SUMF1-203ENST00000405420 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
SUMF1-203ENST00000405420 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
SUMF1-203ENST00000405420 FHAD1B1AJZ9 1412 aa20.94■□□□□ 0.94
SUMF1-203ENST00000405420 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
SUMF1-203ENST00000405420 ADAMTS12P58397 1594 aa20.91■□□□□ 0.94
SUMF1-203ENST00000405420 NUP160Q12769 1436 aa20.86■□□□□ 0.93
SUMF1-203ENST00000405420 KIF27Q86VH2 1401 aa20.83■□□□□ 0.93
SUMF1-203ENST00000405420 CEP170Q5SW79 1584 aa20.83■□□□□ 0.92
SUMF1-203ENST00000405420 IGF1RP08069 1367 aa20.81■□□□□ 0.92
SUMF1-203ENST00000405420 TRHP20396 242 aaPredicted RBP20.75■□□□□ 0.91
SUMF1-203ENST00000405420 JPH4Q96JJ6 628 aa20.74■□□□□ 0.91
SUMF1-203ENST00000405420 ERCC6L2Q5T890 1561 aa20.73■□□□□ 0.91
SUMF1-203ENST00000405420 PRG4Q92954 1404 aaPredicted RBP20.68■□□□□ 0.9
SUMF1-203ENST00000405420 SHROOM2Q13796 1616 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms