RNA–Protein interactions for RNA: ENST00000404956.2

KRT18P52-201, Transcript of keratin 18 pseudogene 52, humanhuman

BASIC

Gene KRT18P52, Length 846 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P52-201ENST00000404956 NISCHQ9Y2I1 1504 aa18.7■□□□□ 0.58
KRT18P52-201ENST00000404956 CCDC180Q9P1Z9 1646 aa16.67■□□□□ 0.26
KRT18P52-201ENST00000404956 ABCC9O60706 1549 aa16.36■□□□□ 0.21
KRT18P52-201ENST00000404956 DCAF8L2P0C7V8 631 aa15.71■□□□□ 0.11
KRT18P52-201ENST00000404956 RB1CC1Q8TDY2 1594 aa15.68■□□□□ 0.1
KRT18P52-201ENST00000404956 NACADO15069 1562 aa15.62■□□□□ 0.09
KRT18P52-201ENST00000404956 ZCCHC6Q5VYS8 1495 aaKnown RBP15.59■□□□□ 0.09
KRT18P52-201ENST00000404956 MYO15BQ96JP2 1530 aa15.43■□□□□ 0.06
KRT18P52-201ENST00000404956 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
KRT18P52-201ENST00000404956 DCAF1Q9Y4B6 1507 aa15.4■□□□□ 0.06
KRT18P52-201ENST00000404956 SCRIBQ14160 1630 aa15.3■□□□□ 0.04
KRT18P52-201ENST00000404956 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
KRT18P52-201ENST00000404956 BICRAQ9NZM4 1560 aa15.21■□□□□ 0.03
KRT18P52-201ENST00000404956 SHROOM4Q9ULL8 1493 aa14.95□□□□□ -0.02
KRT18P52-201ENST00000404956 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
KRT18P52-201ENST00000404956 EIF4G1Q04637 1599 aaKnown RBP14.82□□□□□ -0.04
KRT18P52-201ENST00000404956 CC2D2AQ9P2K1 1620 aa14.78□□□□□ -0.04
KRT18P52-201ENST00000404956 CECR2Q9BXF3 1484 aa14.65□□□□□ -0.06
KRT18P52-201ENST00000404956 SMARCA4P51532 1647 aa14.57□□□□□ -0.08
KRT18P52-201ENST00000404956 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
KRT18P52-201ENST00000404956 MROH2BQ7Z745 1585 aa14.46□□□□□ -0.09
KRT18P52-201ENST00000404956 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
KRT18P52-201ENST00000404956 SMARCA2P51531 1590 aa14.42□□□□□ -0.1
KRT18P52-201ENST00000404956 NCAPD3P42695 1498 aa14.37□□□□□ -0.11
KRT18P52-201ENST00000404956 BAZ1BQ9UIG0 1483 aaKnown RBP14.36□□□□□ -0.11
KRT18P52-201ENST00000404956 WIZO95785 1651 aa14.36□□□□□ -0.11
KRT18P52-201ENST00000404956 HMGXB3Q12766 1538 aa14.36□□□□□ -0.11
KRT18P52-201ENST00000404956 PEG3Q9GZU2 1588 aa14.34□□□□□ -0.11
KRT18P52-201ENST00000404956 RSF1Q96T23 1441 aaPredicted RBP14.24□□□□□ -0.13
KRT18P52-201ENST00000404956 NESP48681 1621 aa14.15□□□□□ -0.14
KRT18P52-201ENST00000404956 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.14
KRT18P52-201ENST00000404956 ERCC6Q03468 1493 aa14.09□□□□□ -0.15
KRT18P52-201ENST00000404956 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
KRT18P52-201ENST00000404956 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
KRT18P52-201ENST00000404956 CADPSQ9ULU8 1353 aa13.97□□□□□ -0.17
KRT18P52-201ENST00000404956 CCDC88BA6NC98 1476 aa13.96□□□□□ -0.17
KRT18P52-201ENST00000404956 SUPT5HO00267 1087 aaKnown RBP13.96□□□□□ -0.17
KRT18P52-201ENST00000404956 THOC2Q8NI27 1593 aaKnown RBP13.94□□□□□ -0.18
KRT18P52-201ENST00000404956 PDS5BQ9NTI5 1447 aa13.92□□□□□ -0.18
KRT18P52-201ENST00000404956 PRDM2Q13029 1718 aa13.92□□□□□ -0.18
KRT18P52-201ENST00000404956 CFTRP13569 1480 aa13.89□□□□□ -0.19
KRT18P52-201ENST00000404956 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
KRT18P52-201ENST00000404956 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
KRT18P52-201ENST00000404956 CUX2O14529 1486 aa13.87□□□□□ -0.19
KRT18P52-201ENST00000404956 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
KRT18P52-201ENST00000404956 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
KRT18P52-201ENST00000404956 WDR62O43379 1518 aa13.79□□□□□ -0.2
KRT18P52-201ENST00000404956 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
KRT18P52-201ENST00000404956 TOPBP1Q92547 1522 aa13.65□□□□□ -0.22
KRT18P52-201ENST00000404956 DNMBPQ6XZF7 1577 aa13.65□□□□□ -0.22
KRT18P52-201ENST00000404956 CUX1P39880 1505 aa13.57□□□□□ -0.24
KRT18P52-201ENST00000404956 ABCC8Q09428 1581 aa13.57□□□□□ -0.24
KRT18P52-201ENST00000404956 POLA1P09884 1462 aaPredicted RBP13.54□□□□□ -0.24
KRT18P52-201ENST00000404956 IFT140Q96RY7 1462 aa13.54□□□□□ -0.24
KRT18P52-201ENST00000404956 FGD5Q6ZNL6 1462 aa13.53□□□□□ -0.24
KRT18P52-201ENST00000404956 ZNF608Q9ULD9 1512 aaPredicted RBP13.53□□□□□ -0.24
KRT18P52-201ENST00000404956 EIF4G3O43432 1585 aaKnown RBP13.52□□□□□ -0.25
KRT18P52-201ENST00000404956 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
KRT18P52-201ENST00000404956 RAD54L2Q9Y4B4 1467 aa13.5□□□□□ -0.25
KRT18P52-201ENST00000404956 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
KRT18P52-201ENST00000404956 SOGA1O94964 1423 aa13.46□□□□□ -0.26
KRT18P52-201ENST00000404956 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.26
KRT18P52-201ENST00000404956 WDR97A6NE52 1622 aa13.45□□□□□ -0.26
KRT18P52-201ENST00000404956 WRNQ14191 1432 aaPredicted RBP eCLIP13.45□□□□□ -0.26
KRT18P52-201ENST00000404956 AQRO60306 1485 aaKnown RBP eCLIP13.44□□□□□ -0.26
KRT18P52-201ENST00000404956 TOP2BQ02880 1626 aa13.43□□□□□ -0.26
KRT18P52-201ENST00000404956 TDRD9Q8NDG6 1382 aaKnown RBP13.41□□□□□ -0.26
KRT18P52-201ENST00000404956 PBRM1Q86U86 1689 aa13.39□□□□□ -0.27
KRT18P52-201ENST00000404956 CHD1O14646 1710 aa13.39□□□□□ -0.27
KRT18P52-201ENST00000404956 ABCA5Q8WWZ7 1642 aa13.35□□□□□ -0.27
KRT18P52-201ENST00000404956 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
KRT18P52-201ENST00000404956 ABCA10Q8WWZ4 1543 aa13.34□□□□□ -0.27
KRT18P52-201ENST00000404956 GAPVD1Q14C86 1478 aa13.31□□□□□ -0.28
KRT18P52-201ENST00000404956 GRIN2BQ13224 1484 aa13.3□□□□□ -0.28
KRT18P52-201ENST00000404956 FBLN2P98095 1184 aa13.3□□□□□ -0.28
KRT18P52-201ENST00000404956 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
KRT18P52-201ENST00000404956 MAGI1Q96QZ7 1491 aaPredicted RBP13.25□□□□□ -0.29
KRT18P52-201ENST00000404956 ADAMTS12P58397 1594 aa13.24□□□□□ -0.29
KRT18P52-201ENST00000404956 SYNJ2O15056 1496 aa13.22□□□□□ -0.29
KRT18P52-201ENST00000404956 CHMP7Q8WUX9 453 aaPredicted RBP13.2□□□□□ -0.3
KRT18P52-201ENST00000404956 ERICH3Q5RHP9 1530 aa13.18□□□□□ -0.3
KRT18P52-201ENST00000404956 RIMBP3CA6NJZ7 1639 aa13.17□□□□□ -0.3
KRT18P52-201ENST00000404956 RIMBP3BA6NNM3 1639 aa13.17□□□□□ -0.3
KRT18P52-201ENST00000404956 RIMBP3Q9UFD9 1639 aa13.17□□□□□ -0.3
KRT18P52-201ENST00000404956 GRIN2AQ12879 1464 aa13.16□□□□□ -0.3
KRT18P52-201ENST00000404956 KIF27Q86VH2 1401 aa13.15□□□□□ -0.3
KRT18P52-201ENST00000404956 CLASP1Q7Z460 1538 aa13.14□□□□□ -0.31
KRT18P52-201ENST00000404956 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
KRT18P52-201ENST00000404956 ARHGEF11O15085 1522 aa13.13□□□□□ -0.31
KRT18P52-201ENST00000404956 CEP170Q5SW79 1584 aa13.13□□□□□ -0.31
KRT18P52-201ENST00000404956 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
KRT18P52-201ENST00000404956 CUL7Q14999 1698 aa13.12□□□□□ -0.31
KRT18P52-201ENST00000404956 RUSC2Q8N2Y8 1516 aa13.1□□□□□ -0.31
KRT18P52-201ENST00000404956 IGF1RP08069 1367 aa13.06□□□□□ -0.32
KRT18P52-201ENST00000404956 NUP160Q12769 1436 aa13.05□□□□□ -0.32
KRT18P52-201ENST00000404956 ARAP1Q96P48 1450 aa13.03□□□□□ -0.32
KRT18P52-201ENST00000404956 ERCC6L2Q5T890 1561 aa13.03□□□□□ -0.32
KRT18P52-201ENST00000404956 CARMIL1Q5VZK9 1371 aa13.01□□□□□ -0.33
KRT18P52-201ENST00000404956 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
KRT18P52-201ENST00000404956 CYB5RLQ6IPT4 315 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms