RNA–Protein interactions for RNA: ENST00000404742.5

ESR1-203, Transcript of estrogen receptor 1, humanhuman

TSL 1 (best)

Gene ESR1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1-203ENST00000404742 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
ESR1-203ENST00000404742 ABCC9O60706 1549 aa29.55■■■□□ 2.32
ESR1-203ENST00000404742 CCDC180Q9P1Z9 1646 aa29.13■■■□□ 2.25
ESR1-203ENST00000404742 DNAJC5BQ9UF47 199 aa28.29■■■□□ 2.12
ESR1-203ENST00000404742 RB1CC1Q8TDY2 1594 aa27.92■■■□□ 2.06
ESR1-203ENST00000404742 NACADO15069 1562 aa27.64■■■□□ 2.01
ESR1-203ENST00000404742 PABPN1Q86U42 306 aaKnown RBP eCLIP27.46■■□□□ 1.99
ESR1-203ENST00000404742 UNC13AQ9UPW8 1703 aa27.43■■□□□ 1.98
ESR1-203ENST00000404742 DCAF8L2P0C7V8 631 aa27.3■■□□□ 1.96
ESR1-203ENST00000404742 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.95
ESR1-203ENST00000404742 MYO15BQ96JP2 1530 aa27.14■■□□□ 1.94
ESR1-203ENST00000404742 CC2D2AQ9P2K1 1620 aa26.72■■□□□ 1.87
ESR1-203ENST00000404742 SHROOM4Q9ULL8 1493 aa26.7■■□□□ 1.87
ESR1-203ENST00000404742 CECR2Q9BXF3 1484 aa26.67■■□□□ 1.86
ESR1-203ENST00000404742 DCAF1Q9Y4B6 1507 aa26.63■■□□□ 1.85
ESR1-203ENST00000404742 ZCCHC6Q5VYS8 1495 aaKnown RBP26.62■■□□□ 1.85
ESR1-203ENST00000404742 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
ESR1-203ENST00000404742 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
ESR1-203ENST00000404742 DNAJC5Q9H3Z4 198 aa26.24■■□□□ 1.79
ESR1-203ENST00000404742 CUX2O14529 1486 aa25.66■■□□□ 1.7
ESR1-203ENST00000404742 NCAPD3P42695 1498 aa25.56■■□□□ 1.68
ESR1-203ENST00000404742 ERCC6Q03468 1493 aa25.46■■□□□ 1.67
ESR1-203ENST00000404742 ATAD2BQ9ULI0 1458 aa25.4■■□□□ 1.66
ESR1-203ENST00000404742 NESP48681 1621 aa25.31■■□□□ 1.64
ESR1-203ENST00000404742 HMGXB3Q12766 1538 aa25.29■■□□□ 1.64
ESR1-203ENST00000404742 SMARCA4P51532 1647 aa25.26■■□□□ 1.63
ESR1-203ENST00000404742 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
ESR1-203ENST00000404742 THOC2Q8NI27 1593 aaKnown RBP25.14■■□□□ 1.62
ESR1-203ENST00000404742 BAZ1BQ9UIG0 1483 aaKnown RBP25.06■■□□□ 1.6
ESR1-203ENST00000404742 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
ESR1-203ENST00000404742 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
ESR1-203ENST00000404742 LAMC3Q9Y6N6 1575 aa25.01■■□□□ 1.59
ESR1-203ENST00000404742 KIF21AQ7Z4S6 1674 aa24.97■■□□□ 1.59
ESR1-203ENST00000404742 MROH2BQ7Z745 1585 aa24.87■■□□□ 1.57
ESR1-203ENST00000404742 PDS5BQ9NTI5 1447 aa24.85■■□□□ 1.57
ESR1-203ENST00000404742 TRIM41Q8WV44 630 aa24.78■■□□□ 1.56
ESR1-203ENST00000404742 CADPSQ9ULU8 1353 aa24.73■■□□□ 1.55
ESR1-203ENST00000404742 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
ESR1-203ENST00000404742 WDR62O43379 1518 aa24.66■■□□□ 1.54
ESR1-203ENST00000404742 WIZO95785 1651 aa24.55■■□□□ 1.52
ESR1-203ENST00000404742 CEP164Q9UPV0 1460 aa24.46■■□□□ 1.51
ESR1-203ENST00000404742 FANCD2Q9BXW9 1451 aa24.43■■□□□ 1.5
ESR1-203ENST00000404742 OSCARQ8IYS5 282 aa24.41■■□□□ 1.5
ESR1-203ENST00000404742 CFTRP13569 1480 aa24.38■■□□□ 1.49
ESR1-203ENST00000404742 URB2Q14146 1524 aaKnown RBP24.31■■□□□ 1.48
ESR1-203ENST00000404742 RIMBP3CA6NJZ7 1639 aa24.19■■□□□ 1.46
ESR1-203ENST00000404742 RIMBP3BA6NNM3 1639 aa24.19■■□□□ 1.46
ESR1-203ENST00000404742 RIMBP3Q9UFD9 1639 aa24.19■■□□□ 1.46
ESR1-203ENST00000404742 RSF1Q96T23 1441 aaPredicted RBP24.18■■□□□ 1.46
ESR1-203ENST00000404742 TOP2AP11388 1531 aaKnown RBP24.15■■□□□ 1.46
ESR1-203ENST00000404742 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
ESR1-203ENST00000404742 ZNF608Q9ULD9 1512 aaPredicted RBP24.08■■□□□ 1.45
ESR1-203ENST00000404742 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
ESR1-203ENST00000404742 IFT140Q96RY7 1462 aa24■■□□□ 1.43
ESR1-203ENST00000404742 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
ESR1-203ENST00000404742 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
ESR1-203ENST00000404742 EIF4G3O43432 1585 aaKnown RBP23.88■■□□□ 1.41
ESR1-203ENST00000404742 CYB5RLQ6IPT4 315 aa23.86■■□□□ 1.41
ESR1-203ENST00000404742 CHD1O14646 1710 aa23.84■■□□□ 1.41
ESR1-203ENST00000404742 TARBP1Q13395 1621 aaKnown RBP23.82■■□□□ 1.4
ESR1-203ENST00000404742 ABCC8Q09428 1581 aa23.81■■□□□ 1.4
ESR1-203ENST00000404742 AQRO60306 1485 aaKnown RBP eCLIP23.79■■□□□ 1.4
ESR1-203ENST00000404742 ARAP1Q96P48 1450 aa23.79■■□□□ 1.4
ESR1-203ENST00000404742 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
ESR1-203ENST00000404742 TRHP20396 242 aaPredicted RBP23.67■■□□□ 1.38
ESR1-203ENST00000404742 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
ESR1-203ENST00000404742 FBLN2P98095 1184 aa23.61■■□□□ 1.37
ESR1-203ENST00000404742 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
ESR1-203ENST00000404742 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
ESR1-203ENST00000404742 CLASP1Q7Z460 1538 aa23.55■■□□□ 1.36
ESR1-203ENST00000404742 SOGA1O94964 1423 aa23.52■■□□□ 1.36
ESR1-203ENST00000404742 SNAPC4Q5SXM2 1469 aa23.49■■□□□ 1.35
ESR1-203ENST00000404742 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
ESR1-203ENST00000404742 FGD5Q6ZNL6 1462 aa23.43■■□□□ 1.34
ESR1-203ENST00000404742 SYNJ1O43426 1573 aa23.41■■□□□ 1.34
ESR1-203ENST00000404742 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
ESR1-203ENST00000404742 MAGI1Q96QZ7 1491 aaPredicted RBP23.4■■□□□ 1.34
ESR1-203ENST00000404742 CUX1P39880 1505 aa23.38■■□□□ 1.33
ESR1-203ENST00000404742 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
ESR1-203ENST00000404742 SYNJ2O15056 1496 aa23.34■■□□□ 1.33
ESR1-203ENST00000404742 AEBP2Q6ZN18 517 aaPredicted RBP23.28■■□□□ 1.32
ESR1-203ENST00000404742 GAPVD1Q14C86 1478 aa23.28■■□□□ 1.32
ESR1-203ENST00000404742 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
ESR1-203ENST00000404742 ERCC6L2Q5T890 1561 aa23.18■■□□□ 1.3
ESR1-203ENST00000404742 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
ESR1-203ENST00000404742 ABCA10Q8WWZ4 1543 aa23.15■■□□□ 1.3
ESR1-203ENST00000404742 GRIN2AQ12879 1464 aa23.07■■□□□ 1.28
ESR1-203ENST00000404742 CEP170Q5SW79 1584 aa23.06■■□□□ 1.28
ESR1-203ENST00000404742 NUP160Q12769 1436 aa23.05■■□□□ 1.28
ESR1-203ENST00000404742 SHROOM2Q13796 1616 aa23.03■■□□□ 1.28
ESR1-203ENST00000404742 KIF13AQ9H1H9 1805 aa23.01■■□□□ 1.27
ESR1-203ENST00000404742 ADAMTS12P58397 1594 aa23■■□□□ 1.27
ESR1-203ENST00000404742 WRNQ14191 1432 aaPredicted RBP eCLIP22.91■■□□□ 1.26
ESR1-203ENST00000404742 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
ESR1-203ENST00000404742 BIVM-ERCC5R4GMW8 1640 aa22.88■■□□□ 1.25
ESR1-203ENST00000404742 TOP2BQ02880 1626 aa22.86■■□□□ 1.25
ESR1-203ENST00000404742 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
ESR1-203ENST00000404742 PRG4Q92954 1404 aaPredicted RBP22.82■■□□□ 1.24
ESR1-203ENST00000404742 JPH4Q96JJ6 628 aa22.79■■□□□ 1.24
ESR1-203ENST00000404742 ABCC10Q5T3U5 1492 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms