RNA–Protein interactions for RNA: ENST00000404616.2

AC007249.1-201, humanhuman

TSL 5 BASIC

Gene AC007249.1, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007249.1-201ENST00000404616 NISCHQ9Y2I1 1504 aa28.42■■■□□ 2.14
AC007249.1-201ENST00000404616 CCDC180Q9P1Z9 1646 aa25.32■■□□□ 1.64
AC007249.1-201ENST00000404616 ABCC9O60706 1549 aa24.72■■□□□ 1.55
AC007249.1-201ENST00000404616 RB1CC1Q8TDY2 1594 aa23.86■■□□□ 1.41
AC007249.1-201ENST00000404616 NACADO15069 1562 aa23.84■■□□□ 1.41
AC007249.1-201ENST00000404616 DCAF8L2P0C7V8 631 aa23.72■■□□□ 1.39
AC007249.1-201ENST00000404616 MYO15BQ96JP2 1530 aa23.72■■□□□ 1.39
AC007249.1-201ENST00000404616 ZCCHC6Q5VYS8 1495 aaKnown RBP23.64■■□□□ 1.38
AC007249.1-201ENST00000404616 DCAF1Q9Y4B6 1507 aa23.58■■□□□ 1.36
AC007249.1-201ENST00000404616 UNC13AQ9UPW8 1703 aa23.27■■□□□ 1.32
AC007249.1-201ENST00000404616 PABPN1Q86U42 306 aaKnown RBP eCLIP23.09■■□□□ 1.29
AC007249.1-201ENST00000404616 BICRAQ9NZM4 1560 aa23.07■■□□□ 1.28
AC007249.1-201ENST00000404616 SCRIBQ14160 1630 aa23■■□□□ 1.27
AC007249.1-201ENST00000404616 SHROOM4Q9ULL8 1493 aa22.94■■□□□ 1.26
AC007249.1-201ENST00000404616 DNAJC5BQ9UF47 199 aa22.73■■□□□ 1.23
AC007249.1-201ENST00000404616 EIF4G1Q04637 1599 aaKnown RBP22.48■■□□□ 1.19
AC007249.1-201ENST00000404616 CC2D2AQ9P2K1 1620 aa22.4■■□□□ 1.18
AC007249.1-201ENST00000404616 CECR2Q9BXF3 1484 aa22.26■■□□□ 1.15
AC007249.1-201ENST00000404616 BAZ1AQ9NRL2 1556 aaPredicted RBP22.05■■□□□ 1.12
AC007249.1-201ENST00000404616 SMARCA4P51532 1647 aa22.05■■□□□ 1.12
AC007249.1-201ENST00000404616 NCAPD3P42695 1498 aa21.98■■□□□ 1.11
AC007249.1-201ENST00000404616 SMARCA2P51531 1590 aa21.96■■□□□ 1.11
AC007249.1-201ENST00000404616 ATAD2BQ9ULI0 1458 aa21.95■■□□□ 1.1
AC007249.1-201ENST00000404616 PEG3Q9GZU2 1588 aa21.88■■□□□ 1.09
AC007249.1-201ENST00000404616 MROH2BQ7Z745 1585 aa21.86■■□□□ 1.09
AC007249.1-201ENST00000404616 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
AC007249.1-201ENST00000404616 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.07
AC007249.1-201ENST00000404616 WIZO95785 1651 aa21.62■■□□□ 1.05
AC007249.1-201ENST00000404616 RSF1Q96T23 1441 aaPredicted RBP21.62■■□□□ 1.05
AC007249.1-201ENST00000404616 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
AC007249.1-201ENST00000404616 LAMC3Q9Y6N6 1575 aa21.41■■□□□ 1.02
AC007249.1-201ENST00000404616 NESP48681 1621 aa21.37■■□□□ 1.01
AC007249.1-201ENST00000404616 ERCC6Q03468 1493 aa21.36■■□□□ 1.01
AC007249.1-201ENST00000404616 CADPSQ9ULU8 1353 aa21.33■■□□□ 1
AC007249.1-201ENST00000404616 PDS5BQ9NTI5 1447 aa21.28■■□□□ 1
AC007249.1-201ENST00000404616 CUX2O14529 1486 aa21.2■□□□□ 0.98
AC007249.1-201ENST00000404616 CFTRP13569 1480 aa21.19■□□□□ 0.98
AC007249.1-201ENST00000404616 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
AC007249.1-201ENST00000404616 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
AC007249.1-201ENST00000404616 THOC2Q8NI27 1593 aaKnown RBP21.09■□□□□ 0.97
AC007249.1-201ENST00000404616 FANCD2Q9BXW9 1451 aa21.06■□□□□ 0.96
AC007249.1-201ENST00000404616 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
AC007249.1-201ENST00000404616 CEP164Q9UPV0 1460 aa21.04■□□□□ 0.96
AC007249.1-201ENST00000404616 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
AC007249.1-201ENST00000404616 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
AC007249.1-201ENST00000404616 WDR62O43379 1518 aa20.95■□□□□ 0.94
AC007249.1-201ENST00000404616 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
AC007249.1-201ENST00000404616 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
AC007249.1-201ENST00000404616 TOPBP1Q92547 1522 aa20.71■□□□□ 0.91
AC007249.1-201ENST00000404616 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
AC007249.1-201ENST00000404616 IFT140Q96RY7 1462 aa20.62■□□□□ 0.89
AC007249.1-201ENST00000404616 DNAJC5Q9H3Z4 198 aa20.6■□□□□ 0.89
AC007249.1-201ENST00000404616 POLA1P09884 1462 aaPredicted RBP20.52■□□□□ 0.88
AC007249.1-201ENST00000404616 CUX1P39880 1505 aa20.51■□□□□ 0.87
AC007249.1-201ENST00000404616 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
AC007249.1-201ENST00000404616 SOGA1O94964 1423 aa20.47■□□□□ 0.87
AC007249.1-201ENST00000404616 ZNF608Q9ULD9 1512 aaPredicted RBP20.46■□□□□ 0.87
AC007249.1-201ENST00000404616 FGD5Q6ZNL6 1462 aa20.45■□□□□ 0.86
AC007249.1-201ENST00000404616 WDR97A6NE52 1622 aa20.41■□□□□ 0.86
AC007249.1-201ENST00000404616 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
AC007249.1-201ENST00000404616 RAD54L2Q9Y4B4 1467 aa20.4■□□□□ 0.86
AC007249.1-201ENST00000404616 EIF4G3O43432 1585 aaKnown RBP20.39■□□□□ 0.85
AC007249.1-201ENST00000404616 TOP2BQ02880 1626 aa20.36■□□□□ 0.85
AC007249.1-201ENST00000404616 AQRO60306 1485 aaKnown RBP eCLIP20.36■□□□□ 0.85
AC007249.1-201ENST00000404616 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
AC007249.1-201ENST00000404616 OSCARQ8IYS5 282 aa20.32■□□□□ 0.84
AC007249.1-201ENST00000404616 TDRD9Q8NDG6 1382 aaKnown RBP20.32■□□□□ 0.84
AC007249.1-201ENST00000404616 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
AC007249.1-201ENST00000404616 SYNJ1O43426 1573 aa20.29■□□□□ 0.84
AC007249.1-201ENST00000404616 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
AC007249.1-201ENST00000404616 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
AC007249.1-201ENST00000404616 MAGI1Q96QZ7 1491 aaPredicted RBP20.2■□□□□ 0.82
AC007249.1-201ENST00000404616 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
AC007249.1-201ENST00000404616 SNAPC4Q5SXM2 1469 aa20.17■□□□□ 0.82
AC007249.1-201ENST00000404616 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
AC007249.1-201ENST00000404616 CHD1O14646 1710 aa20.16■□□□□ 0.82
AC007249.1-201ENST00000404616 FBLN2P98095 1184 aa20.14■□□□□ 0.81
AC007249.1-201ENST00000404616 CHMP7Q8WUX9 453 aaPredicted RBP20.12■□□□□ 0.81
AC007249.1-201ENST00000404616 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
AC007249.1-201ENST00000404616 ERICH3Q5RHP9 1530 aa20.07■□□□□ 0.8
AC007249.1-201ENST00000404616 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
AC007249.1-201ENST00000404616 KIF27Q86VH2 1401 aa20■□□□□ 0.79
AC007249.1-201ENST00000404616 ADAMTS12P58397 1594 aa19.99■□□□□ 0.79
AC007249.1-201ENST00000404616 GRIN2AQ12879 1464 aa19.96■□□□□ 0.79
AC007249.1-201ENST00000404616 CLASP1Q7Z460 1538 aa19.95■□□□□ 0.78
AC007249.1-201ENST00000404616 ARHGEF11O15085 1522 aa19.92■□□□□ 0.78
AC007249.1-201ENST00000404616 RIMBP3CA6NJZ7 1639 aa19.92■□□□□ 0.78
AC007249.1-201ENST00000404616 RIMBP3BA6NNM3 1639 aa19.92■□□□□ 0.78
AC007249.1-201ENST00000404616 RIMBP3Q9UFD9 1639 aa19.92■□□□□ 0.78
AC007249.1-201ENST00000404616 IGF1RP08069 1367 aa19.92■□□□□ 0.78
AC007249.1-201ENST00000404616 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
AC007249.1-201ENST00000404616 NUP160Q12769 1436 aa19.88■□□□□ 0.77
AC007249.1-201ENST00000404616 CUL7Q14999 1698 aa19.87■□□□□ 0.77
AC007249.1-201ENST00000404616 CEP170Q5SW79 1584 aa19.83■□□□□ 0.76
AC007249.1-201ENST00000404616 CARMIL1Q5VZK9 1371 aa19.8■□□□□ 0.76
AC007249.1-201ENST00000404616 CYB5RLQ6IPT4 315 aa19.76■□□□□ 0.75
AC007249.1-201ENST00000404616 ARAP1Q96P48 1450 aa19.74■□□□□ 0.75
AC007249.1-201ENST00000404616 SHROOM2Q13796 1616 aa19.74■□□□□ 0.75
AC007249.1-201ENST00000404616 JPH4Q96JJ6 628 aa19.71■□□□□ 0.75
AC007249.1-201ENST00000404616 RUSC2Q8N2Y8 1516 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms