RNA–Protein interactions for RNA: ENST00000404436.2

CHI3L1-202, Transcript of chitinase 3 like 1, humanhuman

TSL 2

Gene CHI3L1, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1-202ENST00000404436 NISCHQ9Y2I1 1504 aa39.86■■■■□ 3.97
CHI3L1-202ENST00000404436 CCDC180Q9P1Z9 1646 aa35.54■■■■□ 3.28
CHI3L1-202ENST00000404436 ABCC9O60706 1549 aa35.11■■■■□ 3.21
CHI3L1-202ENST00000404436 RB1CC1Q8TDY2 1594 aa33.61■■■□□ 2.97
CHI3L1-202ENST00000404436 DCAF8L2P0C7V8 631 aa33.56■■■□□ 2.96
CHI3L1-202ENST00000404436 NACADO15069 1562 aa33.5■■■□□ 2.95
CHI3L1-202ENST00000404436 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
CHI3L1-202ENST00000404436 ZCCHC6Q5VYS8 1495 aaKnown RBP33.12■■■□□ 2.89
CHI3L1-202ENST00000404436 DCAF1Q9Y4B6 1507 aa32.93■■■□□ 2.86
CHI3L1-202ENST00000404436 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
CHI3L1-202ENST00000404436 PABPN1Q86U42 306 aaKnown RBP eCLIP32.81■■■□□ 2.84
CHI3L1-202ENST00000404436 BICRAQ9NZM4 1560 aa32.61■■■□□ 2.81
CHI3L1-202ENST00000404436 DNAJC5BQ9UF47 199 aa32.54■■■□□ 2.8
CHI3L1-202ENST00000404436 SCRIBQ14160 1630 aa32.44■■■□□ 2.78
CHI3L1-202ENST00000404436 SHROOM4Q9ULL8 1493 aa32.18■■■□□ 2.74
CHI3L1-202ENST00000404436 EIF4G1Q04637 1599 aaKnown RBP31.77■■■□□ 2.68
CHI3L1-202ENST00000404436 CC2D2AQ9P2K1 1620 aa31.73■■■□□ 2.67
CHI3L1-202ENST00000404436 CECR2Q9BXF3 1484 aa31.57■■■□□ 2.64
CHI3L1-202ENST00000404436 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
CHI3L1-202ENST00000404436 NCAPD3P42695 1498 aa30.93■■■□□ 2.54
CHI3L1-202ENST00000404436 BAZ1AQ9NRL2 1556 aaPredicted RBP30.91■■■□□ 2.54
CHI3L1-202ENST00000404436 ATAD2BQ9ULI0 1458 aa30.9■■■□□ 2.54
CHI3L1-202ENST00000404436 SMARCA2P51531 1590 aa30.84■■■□□ 2.53
CHI3L1-202ENST00000404436 MROH2BQ7Z745 1585 aa30.73■■■□□ 2.51
CHI3L1-202ENST00000404436 HMGXB3Q12766 1538 aa30.72■■■□□ 2.51
CHI3L1-202ENST00000404436 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
CHI3L1-202ENST00000404436 BAZ1BQ9UIG0 1483 aaKnown RBP30.63■■■□□ 2.49
CHI3L1-202ENST00000404436 WIZO95785 1651 aa30.4■■■□□ 2.46
CHI3L1-202ENST00000404436 NESP48681 1621 aa30.3■■■□□ 2.44
CHI3L1-202ENST00000404436 ERCC6Q03468 1493 aa30.28■■■□□ 2.44
CHI3L1-202ENST00000404436 RSF1Q96T23 1441 aaPredicted RBP30.28■■■□□ 2.44
CHI3L1-202ENST00000404436 LAMC3Q9Y6N6 1575 aa30.15■■■□□ 2.42
CHI3L1-202ENST00000404436 CADPSQ9ULU8 1353 aa30.03■■■□□ 2.4
CHI3L1-202ENST00000404436 CUX2O14529 1486 aa30.03■■■□□ 2.4
CHI3L1-202ENST00000404436 TOP2AP11388 1531 aaKnown RBP30.01■■■□□ 2.4
CHI3L1-202ENST00000404436 PDS5BQ9NTI5 1447 aa29.98■■■□□ 2.39
CHI3L1-202ENST00000404436 KIF21AQ7Z4S6 1674 aa29.92■■■□□ 2.38
CHI3L1-202ENST00000404436 THOC2Q8NI27 1593 aaKnown RBP29.85■■■□□ 2.37
CHI3L1-202ENST00000404436 CFTRP13569 1480 aa29.77■■■□□ 2.36
CHI3L1-202ENST00000404436 CCDC88BA6NC98 1476 aa29.71■■■□□ 2.35
CHI3L1-202ENST00000404436 FANCD2Q9BXW9 1451 aa29.68■■■□□ 2.34
CHI3L1-202ENST00000404436 MRC2Q9UBG0 1479 aa29.67■■■□□ 2.34
CHI3L1-202ENST00000404436 CEP164Q9UPV0 1460 aa29.65■■■□□ 2.34
CHI3L1-202ENST00000404436 WDR62O43379 1518 aa29.55■■■□□ 2.32
CHI3L1-202ENST00000404436 PRDM2Q13029 1718 aa29.52■■■□□ 2.32
CHI3L1-202ENST00000404436 DNAJC5Q9H3Z4 198 aa29.52■■■□□ 2.32
CHI3L1-202ENST00000404436 URB2Q14146 1524 aaKnown RBP29.39■■■□□ 2.3
CHI3L1-202ENST00000404436 SUPT5HO00267 1087 aaKnown RBP29.38■■■□□ 2.29
CHI3L1-202ENST00000404436 TOPBP1Q92547 1522 aa29.16■■■□□ 2.26
CHI3L1-202ENST00000404436 ABCC8Q09428 1581 aa29.14■■■□□ 2.26
CHI3L1-202ENST00000404436 DNMBPQ6XZF7 1577 aa29.09■■■□□ 2.25
CHI3L1-202ENST00000404436 IFT140Q96RY7 1462 aa29.04■■■□□ 2.24
CHI3L1-202ENST00000404436 ZNF608Q9ULD9 1512 aaPredicted RBP28.96■■■□□ 2.23
CHI3L1-202ENST00000404436 POLA1P09884 1462 aaPredicted RBP28.9■■■□□ 2.22
CHI3L1-202ENST00000404436 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
CHI3L1-202ENST00000404436 CUX1P39880 1505 aa28.84■■■□□ 2.21
CHI3L1-202ENST00000404436 OSCARQ8IYS5 282 aa28.82■■■□□ 2.2
CHI3L1-202ENST00000404436 SOGA1O94964 1423 aa28.81■■■□□ 2.2
CHI3L1-202ENST00000404436 RAD54L2Q9Y4B4 1467 aa28.8■■■□□ 2.2
CHI3L1-202ENST00000404436 EIF4G3O43432 1585 aaKnown RBP28.79■■■□□ 2.2
CHI3L1-202ENST00000404436 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.2
CHI3L1-202ENST00000404436 FGD5Q6ZNL6 1462 aa28.78■■■□□ 2.2
CHI3L1-202ENST00000404436 TDRD9Q8NDG6 1382 aaKnown RBP28.69■■■□□ 2.18
CHI3L1-202ENST00000404436 WDR97A6NE52 1622 aa28.58■■■□□ 2.17
CHI3L1-202ENST00000404436 WRNQ14191 1432 aaPredicted RBP eCLIP28.55■■■□□ 2.16
CHI3L1-202ENST00000404436 FBLN2P98095 1184 aa28.55■■■□□ 2.16
CHI3L1-202ENST00000404436 CHD1O14646 1710 aa28.52■■■□□ 2.16
CHI3L1-202ENST00000404436 TOP2BQ02880 1626 aa28.51■■■□□ 2.15
CHI3L1-202ENST00000404436 BIVM-ERCC5R4GMW8 1640 aa28.5■■■□□ 2.15
CHI3L1-202ENST00000404436 SYNJ1O43426 1573 aa28.49■■■□□ 2.15
CHI3L1-202ENST00000404436 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
CHI3L1-202ENST00000404436 GRIN2BQ13224 1484 aa28.47■■■□□ 2.15
CHI3L1-202ENST00000404436 SNAPC4Q5SXM2 1469 aa28.47■■■□□ 2.15
CHI3L1-202ENST00000404436 GAPVD1Q14C86 1478 aa28.46■■■□□ 2.15
CHI3L1-202ENST00000404436 TRIM41Q8WV44 630 aa28.45■■■□□ 2.14
CHI3L1-202ENST00000404436 MAGI1Q96QZ7 1491 aaPredicted RBP28.41■■■□□ 2.14
CHI3L1-202ENST00000404436 CHMP7Q8WUX9 453 aaPredicted RBP28.41■■■□□ 2.14
CHI3L1-202ENST00000404436 PBRM1Q86U86 1689 aa28.39■■■□□ 2.14
CHI3L1-202ENST00000404436 ABCA5Q8WWZ7 1642 aa28.37■■■□□ 2.13
CHI3L1-202ENST00000404436 RIMBP3CA6NJZ7 1639 aa28.33■■■□□ 2.13
CHI3L1-202ENST00000404436 RIMBP3BA6NNM3 1639 aa28.33■■■□□ 2.13
CHI3L1-202ENST00000404436 RIMBP3Q9UFD9 1639 aa28.33■■■□□ 2.13
CHI3L1-202ENST00000404436 SYNJ2O15056 1496 aa28.32■■■□□ 2.12
CHI3L1-202ENST00000404436 ARHGEF11O15085 1522 aa28.28■■■□□ 2.12
CHI3L1-202ENST00000404436 CLASP1Q7Z460 1538 aa28.17■■■□□ 2.1
CHI3L1-202ENST00000404436 ERICH3Q5RHP9 1530 aa28.13■■■□□ 2.09
CHI3L1-202ENST00000404436 ADAMTS12P58397 1594 aa28.12■■■□□ 2.09
CHI3L1-202ENST00000404436 CYB5RLQ6IPT4 315 aa28.12■■■□□ 2.09
CHI3L1-202ENST00000404436 FHAD1B1AJZ9 1412 aa28.1■■■□□ 2.09
CHI3L1-202ENST00000404436 GRIN2AQ12879 1464 aa28.1■■■□□ 2.09
CHI3L1-202ENST00000404436 ARAP1Q96P48 1450 aa28.04■■■□□ 2.08
CHI3L1-202ENST00000404436 KIF27Q86VH2 1401 aa27.99■■■□□ 2.07
CHI3L1-202ENST00000404436 NUP160Q12769 1436 aa27.98■■■□□ 2.07
CHI3L1-202ENST00000404436 CEP170Q5SW79 1584 aa27.97■■■□□ 2.07
CHI3L1-202ENST00000404436 IGF1RP08069 1367 aa27.93■■■□□ 2.06
CHI3L1-202ENST00000404436 CUL7Q14999 1698 aa27.82■■■□□ 2.04
CHI3L1-202ENST00000404436 ERCC6L2Q5T890 1561 aa27.8■■■□□ 2.04
CHI3L1-202ENST00000404436 SHROOM2Q13796 1616 aa27.79■■■□□ 2.04
CHI3L1-202ENST00000404436 JPH4Q96JJ6 628 aa27.77■■■□□ 2.04
CHI3L1-202ENST00000404436 CARMIL1Q5VZK9 1371 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms