RNA–Protein interactions for RNA: ENST00000404291.3

STAG3L1-201, Transcript of stromal antigen 3-like 1 (pseudogene), humanhuman

TSL 3 BASIC

Gene STAG3L1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3L1-201ENST00000404291 NISCHQ9Y2I1 1504 aa20.33■□□□□ 0.85
STAG3L1-201ENST00000404291 ABCC9O60706 1549 aa18.43■□□□□ 0.54
STAG3L1-201ENST00000404291 CCDC180Q9P1Z9 1646 aa18.25■□□□□ 0.51
STAG3L1-201ENST00000404291 RB1CC1Q8TDY2 1594 aa17.45■□□□□ 0.38
STAG3L1-201ENST00000404291 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
STAG3L1-201ENST00000404291 NACADO15069 1562 aa17.32■□□□□ 0.36
STAG3L1-201ENST00000404291 DCAF8L2P0C7V8 631 aa17.26■□□□□ 0.35
STAG3L1-201ENST00000404291 PABPN1Q86U42 306 aaKnown RBP eCLIP17.17■□□□□ 0.34
STAG3L1-201ENST00000404291 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
STAG3L1-201ENST00000404291 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.32
STAG3L1-201ENST00000404291 BICRAQ9NZM4 1560 aa16.96■□□□□ 0.31
STAG3L1-201ENST00000404291 ZCCHC6Q5VYS8 1495 aaKnown RBP16.82■□□□□ 0.28
STAG3L1-201ENST00000404291 DCAF1Q9Y4B6 1507 aa16.78■□□□□ 0.28
STAG3L1-201ENST00000404291 SHROOM4Q9ULL8 1493 aa16.71■□□□□ 0.27
STAG3L1-201ENST00000404291 SCRIBQ14160 1630 aa16.65■□□□□ 0.26
STAG3L1-201ENST00000404291 CC2D2AQ9P2K1 1620 aa16.62■□□□□ 0.25
STAG3L1-201ENST00000404291 CECR2Q9BXF3 1484 aa16.61■□□□□ 0.25
STAG3L1-201ENST00000404291 EIF4G1Q04637 1599 aaKnown RBP16.55■□□□□ 0.24
STAG3L1-201ENST00000404291 DNAJC5Q9H3Z4 198 aa16.09■□□□□ 0.17
STAG3L1-201ENST00000404291 NCAPD3P42695 1498 aa16.02■□□□□ 0.15
STAG3L1-201ENST00000404291 ATAD2BQ9ULI0 1458 aa15.95■□□□□ 0.14
STAG3L1-201ENST00000404291 CUX2O14529 1486 aa15.91■□□□□ 0.14
STAG3L1-201ENST00000404291 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
STAG3L1-201ENST00000404291 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
STAG3L1-201ENST00000404291 SMARCA4P51532 1647 aa15.86■□□□□ 0.13
STAG3L1-201ENST00000404291 HMGXB3Q12766 1538 aa15.85■□□□□ 0.13
STAG3L1-201ENST00000404291 NESP48681 1621 aa15.79■□□□□ 0.12
STAG3L1-201ENST00000404291 BAZ1AQ9NRL2 1556 aaPredicted RBP15.79■□□□□ 0.12
STAG3L1-201ENST00000404291 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
STAG3L1-201ENST00000404291 PEG3Q9GZU2 1588 aa15.72■□□□□ 0.11
STAG3L1-201ENST00000404291 MROH2BQ7Z745 1585 aa15.67■□□□□ 0.1
STAG3L1-201ENST00000404291 LAMC3Q9Y6N6 1575 aa15.64■□□□□ 0.09
STAG3L1-201ENST00000404291 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
STAG3L1-201ENST00000404291 PDS5BQ9NTI5 1447 aa15.59■□□□□ 0.09
STAG3L1-201ENST00000404291 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
STAG3L1-201ENST00000404291 CADPSQ9ULU8 1353 aa15.53■□□□□ 0.08
STAG3L1-201ENST00000404291 WIZO95785 1651 aa15.46■□□□□ 0.07
STAG3L1-201ENST00000404291 MRC2Q9UBG0 1479 aa15.45■□□□□ 0.06
STAG3L1-201ENST00000404291 WDR62O43379 1518 aa15.4■□□□□ 0.06
STAG3L1-201ENST00000404291 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
STAG3L1-201ENST00000404291 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.05
STAG3L1-201ENST00000404291 RSF1Q96T23 1441 aaPredicted RBP15.33■□□□□ 0.04
STAG3L1-201ENST00000404291 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
STAG3L1-201ENST00000404291 CFTRP13569 1480 aa15.32■□□□□ 0.04
STAG3L1-201ENST00000404291 TOP2AP11388 1531 aaKnown RBP15.26■□□□□ 0.03
STAG3L1-201ENST00000404291 URB2Q14146 1524 aaKnown RBP15.22■□□□□ 0.03
STAG3L1-201ENST00000404291 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
STAG3L1-201ENST00000404291 CCDC88BA6NC98 1476 aa15.12■□□□□ 0.01
STAG3L1-201ENST00000404291 IFT140Q96RY7 1462 aa15.07■□□□□ 0
STAG3L1-201ENST00000404291 PRDM2Q13029 1718 aa15.06■□□□□ 0
STAG3L1-201ENST00000404291 ZNF608Q9ULD9 1512 aaPredicted RBP15.06■□□□□ 0
STAG3L1-201ENST00000404291 TOPBP1Q92547 1522 aa15.03■□□□□ -0
STAG3L1-201ENST00000404291 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
STAG3L1-201ENST00000404291 RIMBP3CA6NJZ7 1639 aa14.97□□□□□ -0.01
STAG3L1-201ENST00000404291 RIMBP3BA6NNM3 1639 aa14.97□□□□□ -0.01
STAG3L1-201ENST00000404291 RIMBP3Q9UFD9 1639 aa14.97□□□□□ -0.01
STAG3L1-201ENST00000404291 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
STAG3L1-201ENST00000404291 EIF4G3O43432 1585 aaKnown RBP14.93□□□□□ -0.02
STAG3L1-201ENST00000404291 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
STAG3L1-201ENST00000404291 AQRO60306 1485 aaKnown RBP eCLIP14.92□□□□□ -0.02
STAG3L1-201ENST00000404291 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
STAG3L1-201ENST00000404291 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
STAG3L1-201ENST00000404291 CYB5RLQ6IPT4 315 aa14.86□□□□□ -0.03
STAG3L1-201ENST00000404291 FBLN2P98095 1184 aa14.85□□□□□ -0.03
STAG3L1-201ENST00000404291 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.03
STAG3L1-201ENST00000404291 CHD1O14646 1710 aa14.83□□□□□ -0.04
STAG3L1-201ENST00000404291 TDRD9Q8NDG6 1382 aaKnown RBP14.82□□□□□ -0.04
STAG3L1-201ENST00000404291 SOGA1O94964 1423 aa14.82□□□□□ -0.04
STAG3L1-201ENST00000404291 ARAP1Q96P48 1450 aa14.78□□□□□ -0.04
STAG3L1-201ENST00000404291 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
STAG3L1-201ENST00000404291 SNAPC4Q5SXM2 1469 aa14.74□□□□□ -0.05
STAG3L1-201ENST00000404291 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
STAG3L1-201ENST00000404291 CUX1P39880 1505 aa14.72□□□□□ -0.05
STAG3L1-201ENST00000404291 CHMP7Q8WUX9 453 aaPredicted RBP14.72□□□□□ -0.05
STAG3L1-201ENST00000404291 WDR97A6NE52 1622 aa14.71□□□□□ -0.05
STAG3L1-201ENST00000404291 MAGI1Q96QZ7 1491 aaPredicted RBP14.69□□□□□ -0.06
STAG3L1-201ENST00000404291 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
STAG3L1-201ENST00000404291 CLASP1Q7Z460 1538 aa14.68□□□□□ -0.06
STAG3L1-201ENST00000404291 SYNJ1O43426 1573 aa14.66□□□□□ -0.06
STAG3L1-201ENST00000404291 SYNJ2O15056 1496 aa14.65□□□□□ -0.06
STAG3L1-201ENST00000404291 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
STAG3L1-201ENST00000404291 ABCA10Q8WWZ4 1543 aa14.59□□□□□ -0.07
STAG3L1-201ENST00000404291 SUPT5HO00267 1087 aaKnown RBP14.57□□□□□ -0.08
STAG3L1-201ENST00000404291 PBRM1Q86U86 1689 aa14.56□□□□□ -0.08
STAG3L1-201ENST00000404291 ABCA5Q8WWZ7 1642 aa14.55□□□□□ -0.08
STAG3L1-201ENST00000404291 WRNQ14191 1432 aaPredicted RBP eCLIP14.51□□□□□ -0.09
STAG3L1-201ENST00000404291 GRIN2AQ12879 1464 aa14.5□□□□□ -0.09
STAG3L1-201ENST00000404291 NUP160Q12769 1436 aa14.47□□□□□ -0.09
STAG3L1-201ENST00000404291 ERCC6L2Q5T890 1561 aa14.46□□□□□ -0.09
STAG3L1-201ENST00000404291 ADAMTS12P58397 1594 aa14.45□□□□□ -0.1
STAG3L1-201ENST00000404291 CEP170Q5SW79 1584 aa14.44□□□□□ -0.1
STAG3L1-201ENST00000404291 FHAD1B1AJZ9 1412 aa14.44□□□□□ -0.1
STAG3L1-201ENST00000404291 TOP2BQ02880 1626 aa14.44□□□□□ -0.1
STAG3L1-201ENST00000404291 BIVM-ERCC5R4GMW8 1640 aa14.43□□□□□ -0.1
STAG3L1-201ENST00000404291 ERICH3Q5RHP9 1530 aa14.39□□□□□ -0.11
STAG3L1-201ENST00000404291 SHROOM2Q13796 1616 aa14.38□□□□□ -0.11
STAG3L1-201ENST00000404291 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
STAG3L1-201ENST00000404291 PRG4Q92954 1404 aaPredicted RBP14.34□□□□□ -0.11
STAG3L1-201ENST00000404291 JPH4Q96JJ6 628 aa14.34□□□□□ -0.11
STAG3L1-201ENST00000404291 RUSC2Q8N2Y8 1516 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms