RNA–Protein interactions for RNA: ENST00000404167.1

COX6A1P3-201, Transcript of cytochrome c oxidase subunit 6A1 pseudogene 3, humanhuman

BASIC

Gene COX6A1P3, Length 293 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P3-201ENST00000404167 NISCHQ9Y2I1 1504 aa18.08■□□□□ 0.48
COX6A1P3-201ENST00000404167 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
COX6A1P3-201ENST00000404167 ZCCHC6Q5VYS8 1495 aaKnown RBP15.24■□□□□ 0.03
COX6A1P3-201ENST00000404167 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
COX6A1P3-201ENST00000404167 MYO15BQ96JP2 1530 aa14.87□□□□□ -0.03
COX6A1P3-201ENST00000404167 ABCC9O60706 1549 aa14.72□□□□□ -0.05
COX6A1P3-201ENST00000404167 NACADO15069 1562 aa14.69□□□□□ -0.06
COX6A1P3-201ENST00000404167 DCAF8L2P0C7V8 631 aa14.62□□□□□ -0.07
COX6A1P3-201ENST00000404167 SHROOM4Q9ULL8 1493 aa14.59□□□□□ -0.07
COX6A1P3-201ENST00000404167 RB1CC1Q8TDY2 1594 aa14.54□□□□□ -0.08
COX6A1P3-201ENST00000404167 SCRIBQ14160 1630 aa14.46□□□□□ -0.09
COX6A1P3-201ENST00000404167 UNC13AQ9UPW8 1703 aa14.25□□□□□ -0.13
COX6A1P3-201ENST00000404167 BICRAQ9NZM4 1560 aa14.07□□□□□ -0.16
COX6A1P3-201ENST00000404167 SUPT5HO00267 1087 aaKnown RBP14.03□□□□□ -0.16
COX6A1P3-201ENST00000404167 RSF1Q96T23 1441 aaPredicted RBP13.99□□□□□ -0.17
COX6A1P3-201ENST00000404167 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
COX6A1P3-201ENST00000404167 CECR2Q9BXF3 1484 aa13.96□□□□□ -0.17
COX6A1P3-201ENST00000404167 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
COX6A1P3-201ENST00000404167 SMARCA4P51532 1647 aa13.92□□□□□ -0.18
COX6A1P3-201ENST00000404167 WIZO95785 1651 aa13.82□□□□□ -0.2
COX6A1P3-201ENST00000404167 PABPN1Q86U42 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
COX6A1P3-201ENST00000404167 PEG3Q9GZU2 1588 aa13.79□□□□□ -0.2
COX6A1P3-201ENST00000404167 TOP2AP11388 1531 aaKnown RBP13.76□□□□□ -0.21
COX6A1P3-201ENST00000404167 SMARCA2P51531 1590 aa13.68□□□□□ -0.22
COX6A1P3-201ENST00000404167 EIF4G1Q04637 1599 aaKnown RBP13.64□□□□□ -0.23
COX6A1P3-201ENST00000404167 ATAD2BQ9ULI0 1458 aa13.61□□□□□ -0.23
COX6A1P3-201ENST00000404167 HMGXB3Q12766 1538 aa13.58□□□□□ -0.24
COX6A1P3-201ENST00000404167 BAZ1BQ9UIG0 1483 aaKnown RBP13.55□□□□□ -0.24
COX6A1P3-201ENST00000404167 CHIC1Q5VXU3 224 aa13.52□□□□□ -0.25
COX6A1P3-201ENST00000404167 CCDC88BA6NC98 1476 aa13.52□□□□□ -0.25
COX6A1P3-201ENST00000404167 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
COX6A1P3-201ENST00000404167 CC2D2AQ9P2K1 1620 aa13.4□□□□□ -0.26
COX6A1P3-201ENST00000404167 PRDM2Q13029 1718 aa13.3□□□□□ -0.28
COX6A1P3-201ENST00000404167 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
COX6A1P3-201ENST00000404167 TRIM41Q8WV44 630 aa13.25□□□□□ -0.29
COX6A1P3-201ENST00000404167 CFTRP13569 1480 aa13.23□□□□□ -0.29
COX6A1P3-201ENST00000404167 WRNQ14191 1432 aaPredicted RBP eCLIP13.19□□□□□ -0.3
COX6A1P3-201ENST00000404167 BIVM-ERCC5R4GMW8 1640 aa13.16□□□□□ -0.3
COX6A1P3-201ENST00000404167 SYNJ1O43426 1573 aa13.15□□□□□ -0.3
COX6A1P3-201ENST00000404167 TOP2BQ02880 1626 aa13.14□□□□□ -0.31
COX6A1P3-201ENST00000404167 CADPSQ9ULU8 1353 aa13.12□□□□□ -0.31
COX6A1P3-201ENST00000404167 EEA1Q15075 1411 aa13.1□□□□□ -0.31
COX6A1P3-201ENST00000404167 LAMC3Q9Y6N6 1575 aa13.09□□□□□ -0.31
COX6A1P3-201ENST00000404167 CUX1P39880 1505 aa13.03□□□□□ -0.32
COX6A1P3-201ENST00000404167 FANCD2Q9BXW9 1451 aa13□□□□□ -0.33
COX6A1P3-201ENST00000404167 SOGA1O94964 1423 aa12.97□□□□□ -0.33
COX6A1P3-201ENST00000404167 DNMBPQ6XZF7 1577 aa12.96□□□□□ -0.33
COX6A1P3-201ENST00000404167 KIF21BO75037 1637 aa12.95□□□□□ -0.34
COX6A1P3-201ENST00000404167 NESP48681 1621 aa12.95□□□□□ -0.34
COX6A1P3-201ENST00000404167 CEP164Q9UPV0 1460 aa12.94□□□□□ -0.34
COX6A1P3-201ENST00000404167 FAM9AQ8IZU1 332 aaPredicted RBP12.92□□□□□ -0.34
COX6A1P3-201ENST00000404167 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
COX6A1P3-201ENST00000404167 LOC105371045A0A1W2PR82 267 aa12.91□□□□□ -0.34
COX6A1P3-201ENST00000404167 RUSC2Q8N2Y8 1516 aa12.9□□□□□ -0.34
COX6A1P3-201ENST00000404167 GOLGA3Q08378 1498 aa12.89□□□□□ -0.35
COX6A1P3-201ENST00000404167 KIF21AQ7Z4S6 1674 aa12.89□□□□□ -0.35
COX6A1P3-201ENST00000404167 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
COX6A1P3-201ENST00000404167 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
COX6A1P3-201ENST00000404167 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
COX6A1P3-201ENST00000404167 KIF27Q86VH2 1401 aa12.86□□□□□ -0.35
COX6A1P3-201ENST00000404167 ERICH3Q5RHP9 1530 aa12.85□□□□□ -0.35
COX6A1P3-201ENST00000404167 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.35
COX6A1P3-201ENST00000404167 DNAJC5BQ9UF47 199 aa12.83□□□□□ -0.36
COX6A1P3-201ENST00000404167 WDR97A6NE52 1622 aa12.83□□□□□ -0.36
COX6A1P3-201ENST00000404167 POLA1P09884 1462 aaPredicted RBP12.82□□□□□ -0.36
COX6A1P3-201ENST00000404167 TNIKQ9UKE5 1360 aa12.81□□□□□ -0.36
COX6A1P3-201ENST00000404167 ABCA10Q8WWZ4 1543 aa12.81□□□□□ -0.36
COX6A1P3-201ENST00000404167 PRXQ9BXM0 1461 aa12.8□□□□□ -0.36
COX6A1P3-201ENST00000404167 CUX2O14529 1486 aa12.78□□□□□ -0.36
COX6A1P3-201ENST00000404167 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
COX6A1P3-201ENST00000404167 WDR62O43379 1518 aa12.75□□□□□ -0.37
COX6A1P3-201ENST00000404167 CEP162Q5TB80 1403 aa12.75□□□□□ -0.37
COX6A1P3-201ENST00000404167 RAPGEF2Q9Y4G8 1499 aa12.75□□□□□ -0.37
COX6A1P3-201ENST00000404167 ABCA5Q8WWZ7 1642 aa12.74□□□□□ -0.37
COX6A1P3-201ENST00000404167 CUL7Q14999 1698 aa12.73□□□□□ -0.37
COX6A1P3-201ENST00000404167 TARBP1Q13395 1621 aaKnown RBP12.72□□□□□ -0.37
COX6A1P3-201ENST00000404167 THOC2Q8NI27 1593 aaKnown RBP12.7□□□□□ -0.38
COX6A1P3-201ENST00000404167 RAD54L2Q9Y4B4 1467 aa12.7□□□□□ -0.38
COX6A1P3-201ENST00000404167 IGF1RP08069 1367 aa12.67□□□□□ -0.38
COX6A1P3-201ENST00000404167 ERCC6Q03468 1493 aa12.66□□□□□ -0.38
COX6A1P3-201ENST00000404167 EHMT2Q96KQ7 1210 aa12.66□□□□□ -0.38
COX6A1P3-201ENST00000404167 UBTFP17480 764 aaKnown RBP12.65□□□□□ -0.38
COX6A1P3-201ENST00000404167 IFT140Q96RY7 1462 aa12.64□□□□□ -0.39
COX6A1P3-201ENST00000404167 CLIP1P30622 1438 aa12.63□□□□□ -0.39
COX6A1P3-201ENST00000404167 PBRM1Q86U86 1689 aa12.63□□□□□ -0.39
COX6A1P3-201ENST00000404167 GAPVD1Q14C86 1478 aa12.62□□□□□ -0.39
COX6A1P3-201ENST00000404167 CARMIL1Q5VZK9 1371 aa12.62□□□□□ -0.39
COX6A1P3-201ENST00000404167 CTTNBP2Q8WZ74 1663 aa12.59□□□□□ -0.39
COX6A1P3-201ENST00000404167 ADAMTS12P58397 1594 aa12.57□□□□□ -0.4
COX6A1P3-201ENST00000404167 VPS8Q8N3P4 1428 aa12.56□□□□□ -0.4
COX6A1P3-201ENST00000404167 EIF4G3O43432 1585 aaKnown RBP12.55□□□□□ -0.4
COX6A1P3-201ENST00000404167 GRIN2BQ13224 1484 aa12.54□□□□□ -0.4
COX6A1P3-201ENST00000404167 TDRD9Q8NDG6 1382 aaKnown RBP12.54□□□□□ -0.4
COX6A1P3-201ENST00000404167 ARAP1Q96P48 1450 aa12.53□□□□□ -0.4
COX6A1P3-201ENST00000404167 EFCAB5A4FU69 1503 aa12.52□□□□□ -0.4
COX6A1P3-201ENST00000404167 FHAD1B1AJZ9 1412 aa12.51□□□□□ -0.41
COX6A1P3-201ENST00000404167 ARHGAP35Q9NRY4 1499 aa12.5□□□□□ -0.41
COX6A1P3-201ENST00000404167 ZNF608Q9ULD9 1512 aaPredicted RBP12.48□□□□□ -0.41
COX6A1P3-201ENST00000404167 TRIM26Q12899 539 aaPredicted RBP12.48□□□□□ -0.41
COX6A1P3-201ENST00000404167 AQRO60306 1485 aaKnown RBP eCLIP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms