RNA–Protein interactions for RNA: ENST00000403506.1

CLHC1-202, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 5

Gene CLHC1, Length 430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-202ENST00000403506 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.86
CLHC1-202ENST00000403506 CCDC180Q9P1Z9 1646 aa23.74■■□□□ 1.39
CLHC1-202ENST00000403506 ABCC9O60706 1549 aa23.55■■□□□ 1.36
CLHC1-202ENST00000403506 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
CLHC1-202ENST00000403506 NACADO15069 1562 aa22.4■■□□□ 1.18
CLHC1-202ENST00000403506 DCAF8L2P0C7V8 631 aa22.39■■□□□ 1.17
CLHC1-202ENST00000403506 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
CLHC1-202ENST00000403506 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
CLHC1-202ENST00000403506 DCAF1Q9Y4B6 1507 aa22.04■■□□□ 1.12
CLHC1-202ENST00000403506 PABPN1Q86U42 306 aaKnown RBP eCLIP22■■□□□ 1.11
CLHC1-202ENST00000403506 UNC13AQ9UPW8 1703 aa21.94■■□□□ 1.1
CLHC1-202ENST00000403506 DNAJC5BQ9UF47 199 aa21.9■■□□□ 1.1
CLHC1-202ENST00000403506 BICRAQ9NZM4 1560 aa21.88■■□□□ 1.09
CLHC1-202ENST00000403506 SCRIBQ14160 1630 aa21.73■■□□□ 1.07
CLHC1-202ENST00000403506 SHROOM4Q9ULL8 1493 aa21.54■■□□□ 1.04
CLHC1-202ENST00000403506 EIF4G1Q04637 1599 aaKnown RBP21.29■■□□□ 1
CLHC1-202ENST00000403506 CC2D2AQ9P2K1 1620 aa21.26■□□□□ 0.99
CLHC1-202ENST00000403506 CECR2Q9BXF3 1484 aa21.17■□□□□ 0.98
CLHC1-202ENST00000403506 SMARCA4P51532 1647 aa20.74■□□□□ 0.91
CLHC1-202ENST00000403506 NCAPD3P42695 1498 aa20.73■□□□□ 0.91
CLHC1-202ENST00000403506 ATAD2BQ9ULI0 1458 aa20.72■□□□□ 0.91
CLHC1-202ENST00000403506 BAZ1AQ9NRL2 1556 aaPredicted RBP20.67■□□□□ 0.9
CLHC1-202ENST00000403506 SMARCA2P51531 1590 aa20.62■□□□□ 0.89
CLHC1-202ENST00000403506 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
CLHC1-202ENST00000403506 HMGXB3Q12766 1538 aa20.58■□□□□ 0.88
CLHC1-202ENST00000403506 PEG3Q9GZU2 1588 aa20.55■□□□□ 0.88
CLHC1-202ENST00000403506 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
CLHC1-202ENST00000403506 NESP48681 1621 aa20.34■□□□□ 0.85
CLHC1-202ENST00000403506 WIZO95785 1651 aa20.33■□□□□ 0.85
CLHC1-202ENST00000403506 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
CLHC1-202ENST00000403506 ERCC6Q03468 1493 aa20.26■□□□□ 0.83
CLHC1-202ENST00000403506 LAMC3Q9Y6N6 1575 aa20.16■□□□□ 0.82
CLHC1-202ENST00000403506 CUX2O14529 1486 aa20.11■□□□□ 0.81
CLHC1-202ENST00000403506 CADPSQ9ULU8 1353 aa20.11■□□□□ 0.81
CLHC1-202ENST00000403506 TOP2AP11388 1531 aaKnown RBP20.1■□□□□ 0.81
CLHC1-202ENST00000403506 PDS5BQ9NTI5 1447 aa20.04■□□□□ 0.8
CLHC1-202ENST00000403506 THOC2Q8NI27 1593 aaKnown RBP20.03■□□□□ 0.8
CLHC1-202ENST00000403506 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
CLHC1-202ENST00000403506 CFTRP13569 1480 aa19.95■□□□□ 0.78
CLHC1-202ENST00000403506 CCDC88BA6NC98 1476 aa19.9■□□□□ 0.78
CLHC1-202ENST00000403506 FANCD2Q9BXW9 1451 aa19.88■□□□□ 0.77
CLHC1-202ENST00000403506 MRC2Q9UBG0 1479 aa19.88■□□□□ 0.77
CLHC1-202ENST00000403506 CEP164Q9UPV0 1460 aa19.85■□□□□ 0.77
CLHC1-202ENST00000403506 WDR62O43379 1518 aa19.82■□□□□ 0.76
CLHC1-202ENST00000403506 DNAJC5Q9H3Z4 198 aa19.8■□□□□ 0.76
CLHC1-202ENST00000403506 URB2Q14146 1524 aaKnown RBP19.72■□□□□ 0.75
CLHC1-202ENST00000403506 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
CLHC1-202ENST00000403506 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
CLHC1-202ENST00000403506 TOPBP1Q92547 1522 aa19.55■□□□□ 0.72
CLHC1-202ENST00000403506 DNMBPQ6XZF7 1577 aa19.47■□□□□ 0.71
CLHC1-202ENST00000403506 IFT140Q96RY7 1462 aa19.45■□□□□ 0.7
CLHC1-202ENST00000403506 ZNF608Q9ULD9 1512 aaPredicted RBP19.45■□□□□ 0.7
CLHC1-202ENST00000403506 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
CLHC1-202ENST00000403506 POLA1P09884 1462 aaPredicted RBP19.37■□□□□ 0.69
CLHC1-202ENST00000403506 TARBP1Q13395 1621 aaKnown RBP19.34■□□□□ 0.69
CLHC1-202ENST00000403506 CUX1P39880 1505 aa19.34■□□□□ 0.69
CLHC1-202ENST00000403506 RAD54L2Q9Y4B4 1467 aa19.32■□□□□ 0.68
CLHC1-202ENST00000403506 EIF4G3O43432 1585 aaKnown RBP19.3■□□□□ 0.68
CLHC1-202ENST00000403506 AQRO60306 1485 aaKnown RBP eCLIP19.29■□□□□ 0.68
CLHC1-202ENST00000403506 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
CLHC1-202ENST00000403506 SOGA1O94964 1423 aa19.27■□□□□ 0.68
CLHC1-202ENST00000403506 OSCARQ8IYS5 282 aa19.25■□□□□ 0.67
CLHC1-202ENST00000403506 TDRD9Q8NDG6 1382 aaKnown RBP19.23■□□□□ 0.67
CLHC1-202ENST00000403506 WRNQ14191 1432 aaPredicted RBP eCLIP19.1■□□□□ 0.65
CLHC1-202ENST00000403506 WDR97A6NE52 1622 aa19.1■□□□□ 0.65
CLHC1-202ENST00000403506 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
CLHC1-202ENST00000403506 SNAPC4Q5SXM2 1469 aa19.09■□□□□ 0.65
CLHC1-202ENST00000403506 ABCA10Q8WWZ4 1543 aa19.08■□□□□ 0.64
CLHC1-202ENST00000403506 FBLN2P98095 1184 aa19.06■□□□□ 0.64
CLHC1-202ENST00000403506 TRIM41Q8WV44 630 aa19.06■□□□□ 0.64
CLHC1-202ENST00000403506 TOP2BQ02880 1626 aa19.06■□□□□ 0.64
CLHC1-202ENST00000403506 CHD1O14646 1710 aa19.05■□□□□ 0.64
CLHC1-202ENST00000403506 GRIN2BQ13224 1484 aa19.05■□□□□ 0.64
CLHC1-202ENST00000403506 BIVM-ERCC5R4GMW8 1640 aa19.04■□□□□ 0.64
CLHC1-202ENST00000403506 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
CLHC1-202ENST00000403506 MAGI1Q96QZ7 1491 aaPredicted RBP19.02■□□□□ 0.63
CLHC1-202ENST00000403506 ABCA5Q8WWZ7 1642 aa19.01■□□□□ 0.63
CLHC1-202ENST00000403506 RIMBP3CA6NJZ7 1639 aa18.97■□□□□ 0.63
CLHC1-202ENST00000403506 RIMBP3BA6NNM3 1639 aa18.97■□□□□ 0.63
CLHC1-202ENST00000403506 RIMBP3Q9UFD9 1639 aa18.97■□□□□ 0.63
CLHC1-202ENST00000403506 ARHGEF11O15085 1522 aa18.97■□□□□ 0.63
CLHC1-202ENST00000403506 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
CLHC1-202ENST00000403506 CHMP7Q8WUX9 453 aaPredicted RBP18.96■□□□□ 0.63
CLHC1-202ENST00000403506 PBRM1Q86U86 1689 aa18.95■□□□□ 0.62
CLHC1-202ENST00000403506 CLASP1Q7Z460 1538 aa18.91■□□□□ 0.62
CLHC1-202ENST00000403506 ADAMTS12P58397 1594 aa18.85■□□□□ 0.61
CLHC1-202ENST00000403506 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
CLHC1-202ENST00000403506 GRIN2AQ12879 1464 aa18.83■□□□□ 0.6
CLHC1-202ENST00000403506 ERICH3Q5RHP9 1530 aa18.81■□□□□ 0.6
CLHC1-202ENST00000403506 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
CLHC1-202ENST00000403506 FHAD1B1AJZ9 1412 aa18.81■□□□□ 0.6
CLHC1-202ENST00000403506 NUP160Q12769 1436 aa18.76■□□□□ 0.59
CLHC1-202ENST00000403506 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
CLHC1-202ENST00000403506 IGF1RP08069 1367 aa18.71■□□□□ 0.59
CLHC1-202ENST00000403506 KIF27Q86VH2 1401 aa18.7■□□□□ 0.58
CLHC1-202ENST00000403506 ERCC6L2Q5T890 1561 aa18.68■□□□□ 0.58
CLHC1-202ENST00000403506 SHROOM2Q13796 1616 aa18.62■□□□□ 0.57
CLHC1-202ENST00000403506 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.56
CLHC1-202ENST00000403506 CUL7Q14999 1698 aa18.56■□□□□ 0.56
CLHC1-202ENST00000403506 PRG4Q92954 1404 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms