RNA–Protein interactions for RNA: ENST00000403444.7

CEACAM1-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-207ENST00000403444 NISCHQ9Y2I1 1504 aa14.7□□□□□ -0.06
CEACAM1-207ENST00000403444 CCDC180Q9P1Z9 1646 aa13.2□□□□□ -0.3
CEACAM1-207ENST00000403444 ZCCHC6Q5VYS8 1495 aaKnown RBP12.42□□□□□ -0.42
CEACAM1-207ENST00000403444 DCAF1Q9Y4B6 1507 aa12.41□□□□□ -0.42
CEACAM1-207ENST00000403444 MYO15BQ96JP2 1530 aa12.35□□□□□ -0.43
CEACAM1-207ENST00000403444 NACADO15069 1562 aa12.11□□□□□ -0.47
CEACAM1-207ENST00000403444 UNC13AQ9UPW8 1703 aa12.06□□□□□ -0.48
CEACAM1-207ENST00000403444 ABCC9O60706 1549 aa11.96□□□□□ -0.49
CEACAM1-207ENST00000403444 RB1CC1Q8TDY2 1594 aa11.96□□□□□ -0.5
CEACAM1-207ENST00000403444 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
CEACAM1-207ENST00000403444 CHIC1Q5VXU3 224 aa11.76□□□□□ -0.53
CEACAM1-207ENST00000403444 AEBP2Q6ZN18 517 aaPredicted RBP11.74□□□□□ -0.53
CEACAM1-207ENST00000403444 SHROOM4Q9ULL8 1493 aa11.73□□□□□ -0.53
CEACAM1-207ENST00000403444 SCRIBQ14160 1630 aa11.7□□□□□ -0.54
CEACAM1-207ENST00000403444 PEG3Q9GZU2 1588 aa11.48□□□□□ -0.57
CEACAM1-207ENST00000403444 SMARCA4P51532 1647 aa11.4□□□□□ -0.58
CEACAM1-207ENST00000403444 DCAF8L2P0C7V8 631 aa11.37□□□□□ -0.59
CEACAM1-207ENST00000403444 BAZ1AQ9NRL2 1556 aaPredicted RBP11.34□□□□□ -0.59
CEACAM1-207ENST00000403444 SUPT5HO00267 1087 aaKnown RBP11.34□□□□□ -0.59
CEACAM1-207ENST00000403444 MROH2BQ7Z745 1585 aa11.29□□□□□ -0.6
CEACAM1-207ENST00000403444 CECR2Q9BXF3 1484 aa11.29□□□□□ -0.6
CEACAM1-207ENST00000403444 EIF4G1Q04637 1599 aaKnown RBP11.28□□□□□ -0.6
CEACAM1-207ENST00000403444 PELP1Q8IZL8 1130 aaKnown RBP11.26□□□□□ -0.61
CEACAM1-207ENST00000403444 WIZO95785 1651 aa11.24□□□□□ -0.61
CEACAM1-207ENST00000403444 RSF1Q96T23 1441 aaPredicted RBP11.23□□□□□ -0.61
CEACAM1-207ENST00000403444 SMARCA2P51531 1590 aa11.22□□□□□ -0.61
CEACAM1-207ENST00000403444 HMGXB3Q12766 1538 aa11.21□□□□□ -0.61
CEACAM1-207ENST00000403444 TOP2AP11388 1531 aaKnown RBP11.18□□□□□ -0.62
CEACAM1-207ENST00000403444 PRDM2Q13029 1718 aa11.14□□□□□ -0.63
CEACAM1-207ENST00000403444 CC2D2AQ9P2K1 1620 aa11.13□□□□□ -0.63
CEACAM1-207ENST00000403444 ATAD2BQ9ULI0 1458 aa11.11□□□□□ -0.63
CEACAM1-207ENST00000403444 NCAPD3P42695 1498 aa11.1□□□□□ -0.63
CEACAM1-207ENST00000403444 MYT1Q01538 1121 aa11.06□□□□□ -0.64
CEACAM1-207ENST00000403444 PABPN1Q86U42 306 aaKnown RBP eCLIP11.02□□□□□ -0.65
CEACAM1-207ENST00000403444 EHMT2Q96KQ7 1210 aa10.92□□□□□ -0.66
CEACAM1-207ENST00000403444 BAZ1BQ9UIG0 1483 aaKnown RBP10.92□□□□□ -0.66
CEACAM1-207ENST00000403444 CCDC88BA6NC98 1476 aa10.9□□□□□ -0.66
CEACAM1-207ENST00000403444 LAMC3Q9Y6N6 1575 aa10.81□□□□□ -0.68
CEACAM1-207ENST00000403444 CFTRP13569 1480 aa10.81□□□□□ -0.68
CEACAM1-207ENST00000403444 BIVM-ERCC5R4GMW8 1640 aa10.8□□□□□ -0.68
CEACAM1-207ENST00000403444 PCGF6Q9BYE7 350 aa10.77□□□□□ -0.69
CEACAM1-207ENST00000403444 KIF21AQ7Z4S6 1674 aa10.74□□□□□ -0.69
CEACAM1-207ENST00000403444 WDR97A6NE52 1622 aa10.73□□□□□ -0.69
CEACAM1-207ENST00000403444 THOC2Q8NI27 1593 aaKnown RBP10.69□□□□□ -0.7
CEACAM1-207ENST00000403444 TOP2BQ02880 1626 aa10.69□□□□□ -0.7
CEACAM1-207ENST00000403444 DNAJC5BQ9UF47 199 aa10.68□□□□□ -0.7
CEACAM1-207ENST00000403444 SYNJ1O43426 1573 aa10.66□□□□□ -0.7
CEACAM1-207ENST00000403444 FAM9AQ8IZU1 332 aaPredicted RBP10.65□□□□□ -0.71
CEACAM1-207ENST00000403444 PPARGC1BQ86YN6 1023 aaKnown RBP10.64□□□□□ -0.71
CEACAM1-207ENST00000403444 LOC105371045A0A1W2PR82 267 aa10.62□□□□□ -0.71
CEACAM1-207ENST00000403444 CADPSQ9ULU8 1353 aa10.62□□□□□ -0.71
CEACAM1-207ENST00000403444 WDR62O43379 1518 aa10.61□□□□□ -0.71
CEACAM1-207ENST00000403444 CUX1P39880 1505 aa10.6□□□□□ -0.71
CEACAM1-207ENST00000403444 DNMBPQ6XZF7 1577 aa10.59□□□□□ -0.71
CEACAM1-207ENST00000403444 TTBK1Q5TCY1 1321 aaPredicted RBP10.59□□□□□ -0.71
CEACAM1-207ENST00000403444 NESP48681 1621 aa10.59□□□□□ -0.71
CEACAM1-207ENST00000403444 ABCC8Q09428 1581 aa10.58□□□□□ -0.72
CEACAM1-207ENST00000403444 TARBP1Q13395 1621 aaKnown RBP10.56□□□□□ -0.72
CEACAM1-207ENST00000403444 PRKCSHP14314 528 aaPredicted RBP10.54□□□□□ -0.72
CEACAM1-207ENST00000403444 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
CEACAM1-207ENST00000403444 FANCD2Q9BXW9 1451 aa10.53□□□□□ -0.72
CEACAM1-207ENST00000403444 ABCA5Q8WWZ7 1642 aa10.52□□□□□ -0.73
CEACAM1-207ENST00000403444 TOPBP1Q92547 1522 aa10.49□□□□□ -0.73
CEACAM1-207ENST00000403444 CEP164Q9UPV0 1460 aa10.47□□□□□ -0.73
CEACAM1-207ENST00000403444 MRC2Q9UBG0 1479 aa10.45□□□□□ -0.74
CEACAM1-207ENST00000403444 PBRM1Q86U86 1689 aa10.45□□□□□ -0.74
CEACAM1-207ENST00000403444 WRNQ14191 1432 aaPredicted RBP eCLIP10.45□□□□□ -0.74
CEACAM1-207ENST00000403444 PDS5BQ9NTI5 1447 aa10.44□□□□□ -0.74
CEACAM1-207ENST00000403444 ABCA10Q8WWZ4 1543 aa10.42□□□□□ -0.74
CEACAM1-207ENST00000403444 CUX2O14529 1486 aa10.42□□□□□ -0.74
CEACAM1-207ENST00000403444 HRCP23327 699 aa10.41□□□□□ -0.74
CEACAM1-207ENST00000403444 POLA1P09884 1462 aaPredicted RBP10.4□□□□□ -0.74
CEACAM1-207ENST00000403444 KIF21BO75037 1637 aa10.4□□□□□ -0.74
CEACAM1-207ENST00000403444 FGD5Q6ZNL6 1462 aa10.38□□□□□ -0.75
CEACAM1-207ENST00000403444 CUL7Q14999 1698 aa10.36□□□□□ -0.75
CEACAM1-207ENST00000403444 EIF4G3O43432 1585 aaKnown RBP10.35□□□□□ -0.75
CEACAM1-207ENST00000403444 PHF23Q9BUL5 403 aaPredicted RBP10.33□□□□□ -0.76
CEACAM1-207ENST00000403444 ERICH3Q5RHP9 1530 aa10.33□□□□□ -0.76
CEACAM1-207ENST00000403444 SCAF1Q9H7N4 1312 aaKnown RBP10.31□□□□□ -0.76
CEACAM1-207ENST00000403444 ADAMTS12P58397 1594 aa10.31□□□□□ -0.76
CEACAM1-207ENST00000403444 EEA1Q15075 1411 aa10.3□□□□□ -0.76
CEACAM1-207ENST00000403444 IFT140Q96RY7 1462 aa10.3□□□□□ -0.76
CEACAM1-207ENST00000403444 BCL11AQ9H165 835 aa10.29□□□□□ -0.76
CEACAM1-207ENST00000403444 CTTNBP2Q8WZ74 1663 aa10.29□□□□□ -0.76
CEACAM1-207ENST00000403444 TRIM41Q8WV44 630 aa10.29□□□□□ -0.76
CEACAM1-207ENST00000403444 PRXQ9BXM0 1461 aa10.28□□□□□ -0.76
CEACAM1-207ENST00000403444 RUSC2Q8N2Y8 1516 aa10.28□□□□□ -0.76
CEACAM1-207ENST00000403444 ERICH6Q7L0X2 663 aa10.27□□□□□ -0.76
CEACAM1-207ENST00000403444 SOGA1O94964 1423 aa10.25□□□□□ -0.77
CEACAM1-207ENST00000403444 RAD54L2Q9Y4B4 1467 aa10.24□□□□□ -0.77
CEACAM1-207ENST00000403444 RANGAP1P46060 587 aaPredicted RBP10.21□□□□□ -0.78
CEACAM1-207ENST00000403444 SHROOM2Q13796 1616 aa10.2□□□□□ -0.78
CEACAM1-207ENST00000403444 ZNF608Q9ULD9 1512 aaPredicted RBP10.19□□□□□ -0.78
CEACAM1-207ENST00000403444 CHD1O14646 1710 aa10.19□□□□□ -0.78
CEACAM1-207ENST00000403444 SAMD9Q5K651 1589 aa10.18□□□□□ -0.78
CEACAM1-207ENST00000403444 ERCC6Q03468 1493 aa10.18□□□□□ -0.78
CEACAM1-207ENST00000403444 SLC24A1O60721 1099 aa10.18□□□□□ -0.78
CEACAM1-207ENST00000403444 MAGI1Q96QZ7 1491 aaPredicted RBP10.16□□□□□ -0.78
CEACAM1-207ENST00000403444 APLP2Q06481 763 aa10.16□□□□□ -0.78
CEACAM1-207ENST00000403444 KIF27Q86VH2 1401 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms