RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 NISCHQ9Y2I1 1504 aa30.02■■■□□ 2.4
CEACAM1-206ENST00000403136 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
CEACAM1-206ENST00000403136 ZCCHC6Q5VYS8 1495 aaKnown RBP25.18■■□□□ 1.62
CEACAM1-206ENST00000403136 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
CEACAM1-206ENST00000403136 DCAF1Q9Y4B6 1507 aa24.8■■□□□ 1.56
CEACAM1-206ENST00000403136 ABCC9O60706 1549 aa24.76■■□□□ 1.55
CEACAM1-206ENST00000403136 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
CEACAM1-206ENST00000403136 MYO15BQ96JP2 1530 aa24.51■■□□□ 1.51
CEACAM1-206ENST00000403136 NACADO15069 1562 aa24.35■■□□□ 1.49
CEACAM1-206ENST00000403136 RB1CC1Q8TDY2 1594 aa24.13■■□□□ 1.45
CEACAM1-206ENST00000403136 SCRIBQ14160 1630 aa24.01■■□□□ 1.43
CEACAM1-206ENST00000403136 SUPT5HO00267 1087 aaKnown RBP23.66■■□□□ 1.38
CEACAM1-206ENST00000403136 UNC13AQ9UPW8 1703 aa23.55■■□□□ 1.36
CEACAM1-206ENST00000403136 PABPN1Q86U42 306 aaKnown RBP eCLIP23.43■■□□□ 1.34
CEACAM1-206ENST00000403136 BICRAQ9NZM4 1560 aa23.4■■□□□ 1.34
CEACAM1-206ENST00000403136 CECR2Q9BXF3 1484 aa23.35■■□□□ 1.33
CEACAM1-206ENST00000403136 RSF1Q96T23 1441 aaPredicted RBP23.32■■□□□ 1.32
CEACAM1-206ENST00000403136 MROH2BQ7Z745 1585 aa23.19■■□□□ 1.3
CEACAM1-206ENST00000403136 BAZ1AQ9NRL2 1556 aaPredicted RBP23.15■■□□□ 1.3
CEACAM1-206ENST00000403136 SMARCA4P51532 1647 aa23.02■■□□□ 1.28
CEACAM1-206ENST00000403136 WIZO95785 1651 aa22.96■■□□□ 1.27
CEACAM1-206ENST00000403136 PEG3Q9GZU2 1588 aa22.75■■□□□ 1.23
CEACAM1-206ENST00000403136 TOP2AP11388 1531 aaKnown RBP22.73■■□□□ 1.23
CEACAM1-206ENST00000403136 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
CEACAM1-206ENST00000403136 EIF4G1Q04637 1599 aaKnown RBP22.7■■□□□ 1.22
CEACAM1-206ENST00000403136 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
CEACAM1-206ENST00000403136 SMARCA2P51531 1590 aa22.66■■□□□ 1.22
CEACAM1-206ENST00000403136 CCDC88BA6NC98 1476 aa22.56■■□□□ 1.2
CEACAM1-206ENST00000403136 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
CEACAM1-206ENST00000403136 NCAPD3P42695 1498 aa22.53■■□□□ 1.2
CEACAM1-206ENST00000403136 HMGXB3Q12766 1538 aa22.42■■□□□ 1.18
CEACAM1-206ENST00000403136 CC2D2AQ9P2K1 1620 aa22.36■■□□□ 1.17
CEACAM1-206ENST00000403136 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
CEACAM1-206ENST00000403136 ABCC8Q09428 1581 aa22.03■■□□□ 1.12
CEACAM1-206ENST00000403136 CFTRP13569 1480 aa22.02■■□□□ 1.12
CEACAM1-206ENST00000403136 CADPSQ9ULU8 1353 aa21.98■■□□□ 1.11
CEACAM1-206ENST00000403136 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
CEACAM1-206ENST00000403136 DNAJC5BQ9UF47 199 aa21.93■■□□□ 1.1
CEACAM1-206ENST00000403136 FAM9AQ8IZU1 332 aaPredicted RBP21.84■■□□□ 1.09
CEACAM1-206ENST00000403136 LOC105371045A0A1W2PR82 267 aa21.82■■□□□ 1.08
CEACAM1-206ENST00000403136 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
CEACAM1-206ENST00000403136 NESP48681 1621 aa21.73■■□□□ 1.07
CEACAM1-206ENST00000403136 PRDM2Q13029 1718 aa21.73■■□□□ 1.07
CEACAM1-206ENST00000403136 TOP2BQ02880 1626 aa21.7■■□□□ 1.07
CEACAM1-206ENST00000403136 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
CEACAM1-206ENST00000403136 SOGA1O94964 1423 aa21.69■■□□□ 1.06
CEACAM1-206ENST00000403136 FANCD2Q9BXW9 1451 aa21.69■■□□□ 1.06
CEACAM1-206ENST00000403136 CUX1P39880 1505 aa21.67■■□□□ 1.06
CEACAM1-206ENST00000403136 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
CEACAM1-206ENST00000403136 EEA1Q15075 1411 aa21.63■■□□□ 1.05
CEACAM1-206ENST00000403136 PDS5BQ9NTI5 1447 aa21.6■■□□□ 1.05
CEACAM1-206ENST00000403136 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
CEACAM1-206ENST00000403136 CSRNP3Q8WYN3 585 aa21.59■■□□□ 1.05
CEACAM1-206ENST00000403136 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
CEACAM1-206ENST00000403136 EHMT2Q96KQ7 1210 aa21.53■■□□□ 1.04
CEACAM1-206ENST00000403136 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.02
CEACAM1-206ENST00000403136 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
CEACAM1-206ENST00000403136 FGD5Q6ZNL6 1462 aa21.44■■□□□ 1.02
CEACAM1-206ENST00000403136 URB2Q14146 1524 aaKnown RBP21.4■■□□□ 1.02
CEACAM1-206ENST00000403136 KIF27Q86VH2 1401 aa21.4■■□□□ 1.02
CEACAM1-206ENST00000403136 KIF21AQ7Z4S6 1674 aa21.37■■□□□ 1.01
CEACAM1-206ENST00000403136 POLA1P09884 1462 aaPredicted RBP21.34■■□□□ 1.01
CEACAM1-206ENST00000403136 CUX2O14529 1486 aa21.33■■□□□ 1
CEACAM1-206ENST00000403136 UBTFP17480 764 aaKnown RBP21.31■■□□□ 1
CEACAM1-206ENST00000403136 GOLGA3Q08378 1498 aa21.31■■□□□ 1
CEACAM1-206ENST00000403136 TNIKQ9UKE5 1360 aa21.3■■□□□ 1
CEACAM1-206ENST00000403136 RAD54L2Q9Y4B4 1467 aa21.3■■□□□ 1
CEACAM1-206ENST00000403136 MRC2Q9UBG0 1479 aa21.28■■□□□ 1
CEACAM1-206ENST00000403136 KIF21BO75037 1637 aa21.27■■□□□ 1
CEACAM1-206ENST00000403136 ABCA10Q8WWZ4 1543 aa21.26■□□□□ 0.99
CEACAM1-206ENST00000403136 IGF1RP08069 1367 aa21.25■□□□□ 0.99
CEACAM1-206ENST00000403136 PRXQ9BXM0 1461 aa21.25■□□□□ 0.99
CEACAM1-206ENST00000403136 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
CEACAM1-206ENST00000403136 RAPGEF2Q9Y4G8 1499 aa21.22■□□□□ 0.99
CEACAM1-206ENST00000403136 ERICH3Q5RHP9 1530 aa21.15■□□□□ 0.98
CEACAM1-206ENST00000403136 WDR62O43379 1518 aa21.14■□□□□ 0.97
CEACAM1-206ENST00000403136 CEP162Q5TB80 1403 aa21.14■□□□□ 0.97
CEACAM1-206ENST00000403136 CARMIL1Q5VZK9 1371 aa21.13■□□□□ 0.97
CEACAM1-206ENST00000403136 TDRD9Q8NDG6 1382 aaKnown RBP21.13■□□□□ 0.97
CEACAM1-206ENST00000403136 TARBP1Q13395 1621 aaKnown RBP21.08■□□□□ 0.97
CEACAM1-206ENST00000403136 WDR97A6NE52 1622 aa21.08■□□□□ 0.96
CEACAM1-206ENST00000403136 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
CEACAM1-206ENST00000403136 IFT140Q96RY7 1462 aa21.04■□□□□ 0.96
CEACAM1-206ENST00000403136 THOC2Q8NI27 1593 aaKnown RBP21.03■□□□□ 0.96
CEACAM1-206ENST00000403136 ABCA5Q8WWZ7 1642 aa21.02■□□□□ 0.95
CEACAM1-206ENST00000403136 CLIP1P30622 1438 aa21■□□□□ 0.95
CEACAM1-206ENST00000403136 AQRO60306 1485 aaKnown RBP eCLIP20.97■□□□□ 0.951e-6■■□□□ 14.5
CEACAM1-206ENST00000403136 RANGAP1P46060 587 aaPredicted RBP20.95■□□□□ 0.94
CEACAM1-206ENST00000403136 CUL7Q14999 1698 aa20.94■□□□□ 0.94
CEACAM1-206ENST00000403136 ZNF608Q9ULD9 1512 aaPredicted RBP20.92■□□□□ 0.94
CEACAM1-206ENST00000403136 GRIN2BQ13224 1484 aa20.89■□□□□ 0.93
CEACAM1-206ENST00000403136 FHAD1B1AJZ9 1412 aa20.84■□□□□ 0.93
CEACAM1-206ENST00000403136 PBRM1Q86U86 1689 aa20.81■□□□□ 0.92
CEACAM1-206ENST00000403136 TRIM26Q12899 539 aaPredicted RBP20.8■□□□□ 0.92
CEACAM1-206ENST00000403136 VPS8Q8N3P4 1428 aa20.8■□□□□ 0.92
CEACAM1-206ENST00000403136 PCGF6Q9BYE7 350 aa20.8■□□□□ 0.92
CEACAM1-206ENST00000403136 PPARGC1BQ86YN6 1023 aaKnown RBP20.77■□□□□ 0.92
CEACAM1-206ENST00000403136 EIF4G3O43432 1585 aaKnown RBP20.77■□□□□ 0.92
CEACAM1-206ENST00000403136 ARHGAP35Q9NRY4 1499 aa20.77■□□□□ 0.92
CEACAM1-206ENST00000403136 ARAP1Q96P48 1450 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms