RNA–Protein interactions for RNA: ENST00000401644.6

SNED1-203, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-203ENST00000401644 NISCHQ9Y2I1 1504 aa32.64■■■□□ 2.82
SNED1-203ENST00000401644 CCDC180Q9P1Z9 1646 aa28.98■■■□□ 2.23
SNED1-203ENST00000401644 ABCC9O60706 1549 aa28.48■■■□□ 2.15
SNED1-203ENST00000401644 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
SNED1-203ENST00000401644 RB1CC1Q8TDY2 1594 aa27.28■■□□□ 1.96
SNED1-203ENST00000401644 NACADO15069 1562 aa27.26■■□□□ 1.96
SNED1-203ENST00000401644 ZCCHC6Q5VYS8 1495 aaKnown RBP27.18■■□□□ 1.94
SNED1-203ENST00000401644 MYO15BQ96JP2 1530 aa27.14■■□□□ 1.94
SNED1-203ENST00000401644 DCAF1Q9Y4B6 1507 aa27.05■■□□□ 1.92
SNED1-203ENST00000401644 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.86
SNED1-203ENST00000401644 UNC13AQ9UPW8 1703 aa26.6■■□□□ 1.85
SNED1-203ENST00000401644 BICRAQ9NZM4 1560 aa26.46■■□□□ 1.83
SNED1-203ENST00000401644 DNAJC5BQ9UF47 199 aa26.41■■□□□ 1.82
SNED1-203ENST00000401644 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
SNED1-203ENST00000401644 SHROOM4Q9ULL8 1493 aa26.18■■□□□ 1.78
SNED1-203ENST00000401644 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
SNED1-203ENST00000401644 CC2D2AQ9P2K1 1620 aa25.73■■□□□ 1.71
SNED1-203ENST00000401644 CECR2Q9BXF3 1484 aa25.62■■□□□ 1.69
SNED1-203ENST00000401644 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
SNED1-203ENST00000401644 SMARCA4P51532 1647 aa25.29■■□□□ 1.64
SNED1-203ENST00000401644 NCAPD3P42695 1498 aa25.17■■□□□ 1.62
SNED1-203ENST00000401644 ATAD2BQ9ULI0 1458 aa25.15■■□□□ 1.62
SNED1-203ENST00000401644 SMARCA2P51531 1590 aa25.15■■□□□ 1.62
SNED1-203ENST00000401644 MROH2BQ7Z745 1585 aa25.13■■□□□ 1.61
SNED1-203ENST00000401644 PEG3Q9GZU2 1588 aa25.06■■□□□ 1.6
SNED1-203ENST00000401644 HMGXB3Q12766 1538 aa25.01■■□□□ 1.59
SNED1-203ENST00000401644 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
SNED1-203ENST00000401644 RSF1Q96T23 1441 aaPredicted RBP24.9■■□□□ 1.58
SNED1-203ENST00000401644 WIZO95785 1651 aa24.86■■□□□ 1.57
SNED1-203ENST00000401644 TOP2AP11388 1531 aaKnown RBP24.62■■□□□ 1.53
SNED1-203ENST00000401644 NESP48681 1621 aa24.6■■□□□ 1.53
SNED1-203ENST00000401644 ERCC6Q03468 1493 aa24.56■■□□□ 1.52
SNED1-203ENST00000401644 LAMC3Q9Y6N6 1575 aa24.47■■□□□ 1.51
SNED1-203ENST00000401644 CADPSQ9ULU8 1353 aa24.44■■□□□ 1.5
SNED1-203ENST00000401644 PDS5BQ9NTI5 1447 aa24.37■■□□□ 1.49
SNED1-203ENST00000401644 SUPT5HO00267 1087 aaKnown RBP24.37■■□□□ 1.49
SNED1-203ENST00000401644 CCDC88BA6NC98 1476 aa24.34■■□□□ 1.49
SNED1-203ENST00000401644 CUX2O14529 1486 aa24.34■■□□□ 1.49
SNED1-203ENST00000401644 CFTRP13569 1480 aa24.29■■□□□ 1.48
SNED1-203ENST00000401644 KIF21AQ7Z4S6 1674 aa24.22■■□□□ 1.47
SNED1-203ENST00000401644 THOC2Q8NI27 1593 aaKnown RBP24.19■■□□□ 1.46
SNED1-203ENST00000401644 FANCD2Q9BXW9 1451 aa24.13■■□□□ 1.45
SNED1-203ENST00000401644 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
SNED1-203ENST00000401644 MRC2Q9UBG0 1479 aa24.09■■□□□ 1.45
SNED1-203ENST00000401644 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
SNED1-203ENST00000401644 WDR62O43379 1518 aa24■■□□□ 1.43
SNED1-203ENST00000401644 DNAJC5Q9H3Z4 198 aa23.92■■□□□ 1.42
SNED1-203ENST00000401644 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.41
SNED1-203ENST00000401644 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
SNED1-203ENST00000401644 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
SNED1-203ENST00000401644 DNMBPQ6XZF7 1577 aa23.72■■□□□ 1.39
SNED1-203ENST00000401644 IFT140Q96RY7 1462 aa23.61■■□□□ 1.37
SNED1-203ENST00000401644 CUX1P39880 1505 aa23.57■■□□□ 1.36
SNED1-203ENST00000401644 POLA1P09884 1462 aaPredicted RBP23.53■■□□□ 1.36
SNED1-203ENST00000401644 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
SNED1-203ENST00000401644 SOGA1O94964 1423 aa23.49■■□□□ 1.35
SNED1-203ENST00000401644 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
SNED1-203ENST00000401644 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
SNED1-203ENST00000401644 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.34
SNED1-203ENST00000401644 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
SNED1-203ENST00000401644 OSCARQ8IYS5 282 aa23.42■■□□□ 1.34
SNED1-203ENST00000401644 TOP2BQ02880 1626 aa23.41■■□□□ 1.34
SNED1-203ENST00000401644 AQRO60306 1485 aaKnown RBP eCLIP23.41■■□□□ 1.34
SNED1-203ENST00000401644 BIVM-ERCC5R4GMW8 1640 aa23.4■■□□□ 1.34
SNED1-203ENST00000401644 SYNJ1O43426 1573 aa23.36■■□□□ 1.33
SNED1-203ENST00000401644 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
SNED1-203ENST00000401644 TDRD9Q8NDG6 1382 aaKnown RBP23.35■■□□□ 1.33
SNED1-203ENST00000401644 WDR97A6NE52 1622 aa23.33■■□□□ 1.33
SNED1-203ENST00000401644 ABCA10Q8WWZ4 1543 aa23.29■■□□□ 1.32
SNED1-203ENST00000401644 FBLN2P98095 1184 aa23.21■■□□□ 1.31
SNED1-203ENST00000401644 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.3
SNED1-203ENST00000401644 GRIN2BQ13224 1484 aa23.19■■□□□ 1.3
SNED1-203ENST00000401644 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
SNED1-203ENST00000401644 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
SNED1-203ENST00000401644 MAGI1Q96QZ7 1491 aaPredicted RBP23.12■■□□□ 1.29
SNED1-203ENST00000401644 CHMP7Q8WUX9 453 aaPredicted RBP23.11■■□□□ 1.29
SNED1-203ENST00000401644 PBRM1Q86U86 1689 aa23.1■■□□□ 1.29
SNED1-203ENST00000401644 CHD1O14646 1710 aa23.08■■□□□ 1.29
SNED1-203ENST00000401644 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
SNED1-203ENST00000401644 ERICH3Q5RHP9 1530 aa23.03■■□□□ 1.28
SNED1-203ENST00000401644 KIF27Q86VH2 1401 aa23.02■■□□□ 1.28
SNED1-203ENST00000401644 SYNJ2O15056 1496 aa23.02■■□□□ 1.28
SNED1-203ENST00000401644 FHAD1B1AJZ9 1412 aa22.95■■□□□ 1.26
SNED1-203ENST00000401644 RIMBP3CA6NJZ7 1639 aa22.93■■□□□ 1.26
SNED1-203ENST00000401644 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
SNED1-203ENST00000401644 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
SNED1-203ENST00000401644 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
SNED1-203ENST00000401644 ADAMTS12P58397 1594 aa22.92■■□□□ 1.26
SNED1-203ENST00000401644 IGF1RP08069 1367 aa22.91■■□□□ 1.26
SNED1-203ENST00000401644 GRIN2AQ12879 1464 aa22.87■■□□□ 1.25
SNED1-203ENST00000401644 CLASP1Q7Z460 1538 aa22.87■■□□□ 1.25
SNED1-203ENST00000401644 CYB5RLQ6IPT4 315 aa22.84■■□□□ 1.25
SNED1-203ENST00000401644 CUL7Q14999 1698 aa22.82■■□□□ 1.24
SNED1-203ENST00000401644 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
SNED1-203ENST00000401644 CARMIL1Q5VZK9 1371 aa22.79■■□□□ 1.24
SNED1-203ENST00000401644 NUP160Q12769 1436 aa22.77■■□□□ 1.24
SNED1-203ENST00000401644 RUSC2Q8N2Y8 1516 aa22.76■■□□□ 1.23
SNED1-203ENST00000401644 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
SNED1-203ENST00000401644 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
SNED1-203ENST00000401644 EEA1Q15075 1411 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms