RNA–Protein interactions for RNA: ENST00000401593.5

PPM1N-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 2 BASIC

Gene PPM1N, Length 548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-204ENST00000401593 NISCHQ9Y2I1 1504 aa28.9■■■□□ 2.22
PPM1N-204ENST00000401593 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
PPM1N-204ENST00000401593 ABCC9O60706 1549 aa26■■□□□ 1.75
PPM1N-204ENST00000401593 RB1CC1Q8TDY2 1594 aa24.8■■□□□ 1.56
PPM1N-204ENST00000401593 NACADO15069 1562 aa24.59■■□□□ 1.53
PPM1N-204ENST00000401593 DNAJC5BQ9UF47 199 aa24.3■■□□□ 1.48
PPM1N-204ENST00000401593 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
PPM1N-204ENST00000401593 MYO15BQ96JP2 1530 aa24.26■■□□□ 1.47
PPM1N-204ENST00000401593 DCAF8L2P0C7V8 631 aa24.17■■□□□ 1.46
PPM1N-204ENST00000401593 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.44
PPM1N-204ENST00000401593 PABPN1Q86U42 306 aaKnown RBP eCLIP24.07■■□□□ 1.44
PPM1N-204ENST00000401593 ZCCHC6Q5VYS8 1495 aaKnown RBP24.01■■□□□ 1.43
PPM1N-204ENST00000401593 DCAF1Q9Y4B6 1507 aa23.92■■□□□ 1.42
PPM1N-204ENST00000401593 SHROOM4Q9ULL8 1493 aa23.82■■□□□ 1.4
PPM1N-204ENST00000401593 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
PPM1N-204ENST00000401593 CC2D2AQ9P2K1 1620 aa23.54■■□□□ 1.36
PPM1N-204ENST00000401593 EIF4G1Q04637 1599 aaKnown RBP23.5■■□□□ 1.35
PPM1N-204ENST00000401593 CECR2Q9BXF3 1484 aa23.44■■□□□ 1.34
PPM1N-204ENST00000401593 NCAPD3P42695 1498 aa22.65■■□□□ 1.22
PPM1N-204ENST00000401593 SMARCA4P51532 1647 aa22.63■■□□□ 1.21
PPM1N-204ENST00000401593 HMGXB3Q12766 1538 aa22.59■■□□□ 1.21
PPM1N-204ENST00000401593 ATAD2BQ9ULI0 1458 aa22.59■■□□□ 1.21
PPM1N-204ENST00000401593 SMARCA2P51531 1590 aa22.58■■□□□ 1.2
PPM1N-204ENST00000401593 CUX2O14529 1486 aa22.5■■□□□ 1.19
PPM1N-204ENST00000401593 BAZ1AQ9NRL2 1556 aaPredicted RBP22.48■■□□□ 1.19
PPM1N-204ENST00000401593 ERCC6Q03468 1493 aa22.47■■□□□ 1.19
PPM1N-204ENST00000401593 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
PPM1N-204ENST00000401593 BAZ1BQ9UIG0 1483 aaKnown RBP22.4■■□□□ 1.18
PPM1N-204ENST00000401593 DNAJC5Q9H3Z4 198 aa22.37■■□□□ 1.17
PPM1N-204ENST00000401593 NESP48681 1621 aa22.32■■□□□ 1.16
PPM1N-204ENST00000401593 MROH2BQ7Z745 1585 aa22.26■■□□□ 1.15
PPM1N-204ENST00000401593 THOC2Q8NI27 1593 aaKnown RBP22.25■■□□□ 1.15
PPM1N-204ENST00000401593 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
PPM1N-204ENST00000401593 KIF21AQ7Z4S6 1674 aa22.12■■□□□ 1.13
PPM1N-204ENST00000401593 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.12
PPM1N-204ENST00000401593 WIZO95785 1651 aa22.01■■□□□ 1.11
PPM1N-204ENST00000401593 CADPSQ9ULU8 1353 aa21.93■■□□□ 1.1
PPM1N-204ENST00000401593 WDR62O43379 1518 aa21.9■■□□□ 1.1
PPM1N-204ENST00000401593 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
PPM1N-204ENST00000401593 CEP164Q9UPV0 1460 aa21.8■■□□□ 1.08
PPM1N-204ENST00000401593 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
PPM1N-204ENST00000401593 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
PPM1N-204ENST00000401593 FANCD2Q9BXW9 1451 aa21.73■■□□□ 1.07
PPM1N-204ENST00000401593 CFTRP13569 1480 aa21.71■■□□□ 1.07
PPM1N-204ENST00000401593 PRDM2Q13029 1718 aa21.63■■□□□ 1.05
PPM1N-204ENST00000401593 URB2Q14146 1524 aaKnown RBP21.57■■□□□ 1.04
PPM1N-204ENST00000401593 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
PPM1N-204ENST00000401593 TRIM41Q8WV44 630 aa21.37■■□□□ 1.01
PPM1N-204ENST00000401593 IFT140Q96RY7 1462 aa21.34■■□□□ 1.01
PPM1N-204ENST00000401593 TOPBP1Q92547 1522 aa21.33■■□□□ 1
PPM1N-204ENST00000401593 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
PPM1N-204ENST00000401593 EIF4G3O43432 1585 aaKnown RBP21.29■■□□□ 1
PPM1N-204ENST00000401593 DNMBPQ6XZF7 1577 aa21.29■■□□□ 1
PPM1N-204ENST00000401593 OSCARQ8IYS5 282 aa21.26■□□□□ 0.99
PPM1N-204ENST00000401593 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
PPM1N-204ENST00000401593 RIMBP3CA6NJZ7 1639 aa21.19■□□□□ 0.98
PPM1N-204ENST00000401593 RIMBP3BA6NNM3 1639 aa21.19■□□□□ 0.98
PPM1N-204ENST00000401593 RIMBP3Q9UFD9 1639 aa21.19■□□□□ 0.98
PPM1N-204ENST00000401593 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
PPM1N-204ENST00000401593 POLA1P09884 1462 aaPredicted RBP21.12■□□□□ 0.97
PPM1N-204ENST00000401593 ARHGEF11O15085 1522 aa21.11■□□□□ 0.97
PPM1N-204ENST00000401593 CHD1O14646 1710 aa21.11■□□□□ 0.97
PPM1N-204ENST00000401593 AQRO60306 1485 aaKnown RBP eCLIP21.04■□□□□ 0.965e-16■■■■■ 50.7
PPM1N-204ENST00000401593 WDR97A6NE52 1622 aa21.02■□□□□ 0.96
PPM1N-204ENST00000401593 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
PPM1N-204ENST00000401593 FGD5Q6ZNL6 1462 aa20.97■□□□□ 0.95
PPM1N-204ENST00000401593 CUX1P39880 1505 aa20.95■□□□□ 0.94
PPM1N-204ENST00000401593 SOGA1O94964 1423 aa20.92■□□□□ 0.94
PPM1N-204ENST00000401593 SNAPC4Q5SXM2 1469 aa20.92■□□□□ 0.94
PPM1N-204ENST00000401593 ARAP1Q96P48 1450 aa20.9■□□□□ 0.94
PPM1N-204ENST00000401593 TDRD9Q8NDG6 1382 aaKnown RBP20.87■□□□□ 0.93
PPM1N-204ENST00000401593 CLASP1Q7Z460 1538 aa20.87■□□□□ 0.93
PPM1N-204ENST00000401593 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
PPM1N-204ENST00000401593 PBRM1Q86U86 1689 aa20.83■□□□□ 0.93
PPM1N-204ENST00000401593 SYNJ1O43426 1573 aa20.83■□□□□ 0.92
PPM1N-204ENST00000401593 FBLN2P98095 1184 aa20.82■□□□□ 0.92
PPM1N-204ENST00000401593 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
PPM1N-204ENST00000401593 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
PPM1N-204ENST00000401593 SYNJ2O15056 1496 aa20.78■□□□□ 0.92
PPM1N-204ENST00000401593 CYB5RLQ6IPT4 315 aa20.76■□□□□ 0.91
PPM1N-204ENST00000401593 ABCA10Q8WWZ4 1543 aa20.73■□□□□ 0.91
PPM1N-204ENST00000401593 GAPVD1Q14C86 1478 aa20.72■□□□□ 0.91
PPM1N-204ENST00000401593 CHMP7Q8WUX9 453 aaPredicted RBP20.67■□□□□ 0.9
PPM1N-204ENST00000401593 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
PPM1N-204ENST00000401593 ADAMTS12P58397 1594 aa20.64■□□□□ 0.9
PPM1N-204ENST00000401593 TOP2BQ02880 1626 aa20.62■□□□□ 0.89
PPM1N-204ENST00000401593 GRIN2AQ12879 1464 aa20.58■□□□□ 0.89
PPM1N-204ENST00000401593 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.88
PPM1N-204ENST00000401593 SUPT5HO00267 1087 aaKnown RBP20.57■□□□□ 0.88
PPM1N-204ENST00000401593 TRHP20396 242 aaPredicted RBP20.55■□□□□ 0.88
PPM1N-204ENST00000401593 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
PPM1N-204ENST00000401593 NUP160Q12769 1436 aa20.51■□□□□ 0.87
PPM1N-204ENST00000401593 ERCC6L2Q5T890 1561 aa20.49■□□□□ 0.87
PPM1N-204ENST00000401593 SHROOM2Q13796 1616 aa20.49■□□□□ 0.87
PPM1N-204ENST00000401593 ERICH3Q5RHP9 1530 aa20.48■□□□□ 0.87
PPM1N-204ENST00000401593 FHAD1B1AJZ9 1412 aa20.45■□□□□ 0.86
PPM1N-204ENST00000401593 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
PPM1N-204ENST00000401593 PRG4Q92954 1404 aaPredicted RBP20.25■□□□□ 0.83
PPM1N-204ENST00000401593 CUL7Q14999 1698 aa20.23■□□□□ 0.83
PPM1N-204ENST00000401593 KIF13AQ9H1H9 1805 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms