RNA–Protein interactions for RNA: ENST00000401491.7

BRD7-203, Transcript of bromodomain containing 7, humanhuman

TSL 5

Gene BRD7, Length 1,338 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD7-203ENST00000401491 NISCHQ9Y2I1 1504 aa68.36■■■■■ 8.53
BRD7-203ENST00000401491 CCDC180Q9P1Z9 1646 aa60.83■■■■■ 7.33
BRD7-203ENST00000401491 ABCC9O60706 1549 aa59.74■■■■■ 7.15
BRD7-203ENST00000401491 RB1CC1Q8TDY2 1594 aa57.31■■■■■ 6.76
BRD7-203ENST00000401491 NACADO15069 1562 aa57.19■■■■■ 6.75
BRD7-203ENST00000401491 DCAF8L2P0C7V8 631 aa57.12■■■■■ 6.73
BRD7-203ENST00000401491 ZCCHC6Q5VYS8 1495 aaKnown RBP56.94■■■■■ 6.71
BRD7-203ENST00000401491 MYO15BQ96JP2 1530 aa56.76■■■■■ 6.68
BRD7-203ENST00000401491 DCAF1Q9Y4B6 1507 aa56.49■■■■■ 6.63
BRD7-203ENST00000401491 UNC13AQ9UPW8 1703 aa56.16■■■■■ 6.58
BRD7-203ENST00000401491 PABPN1Q86U42 306 aaKnown RBP eCLIP55.79■■■■■ 6.52
BRD7-203ENST00000401491 BICRAQ9NZM4 1560 aa55.71■■■■■ 6.51
BRD7-203ENST00000401491 SCRIBQ14160 1630 aa55.58■■■■■ 6.49
BRD7-203ENST00000401491 DNAJC5BQ9UF47 199 aa55.03■■■■■ 6.4
BRD7-203ENST00000401491 SHROOM4Q9ULL8 1493 aa54.91■■■■■ 6.38
BRD7-203ENST00000401491 EIF4G1Q04637 1599 aaKnown RBP54.19■■■■■ 6.27
BRD7-203ENST00000401491 CC2D2AQ9P2K1 1620 aa54.03■■■■■ 6.24
BRD7-203ENST00000401491 CECR2Q9BXF3 1484 aa53.65■■■■■ 6.18
BRD7-203ENST00000401491 SMARCA4P51532 1647 aa53.11■■■■■ 6.09
BRD7-203ENST00000401491 BAZ1AQ9NRL2 1556 aaPredicted RBP52.95■■■■■ 6.07
BRD7-203ENST00000401491 ATAD2BQ9ULI0 1458 aa52.84■■■■■ 6.05
BRD7-203ENST00000401491 NCAPD3P42695 1498 aa52.79■■■■■ 6.04
BRD7-203ENST00000401491 MROH2BQ7Z745 1585 aa52.74■■■■■ 6.03
BRD7-203ENST00000401491 SMARCA2P51531 1590 aa52.71■■■■■ 6.03
BRD7-203ENST00000401491 PEG3Q9GZU2 1588 aa52.55■■■■■ 6
BRD7-203ENST00000401491 HMGXB3Q12766 1538 aa52.53■■■■■ 6
BRD7-203ENST00000401491 BAZ1BQ9UIG0 1483 aaKnown RBP52.37■■■■■ 5.97
BRD7-203ENST00000401491 WIZO95785 1651 aa52.19■■■■■ 5.95
BRD7-203ENST00000401491 RSF1Q96T23 1441 aaPredicted RBP52.03■■■■■ 5.92
BRD7-203ENST00000401491 NESP48681 1621 aa51.7■■■■■ 5.87
BRD7-203ENST00000401491 TOP2AP11388 1531 aaKnown RBP51.56■■■■■ 5.84
BRD7-203ENST00000401491 ERCC6Q03468 1493 aa51.42■■■■■ 5.82
BRD7-203ENST00000401491 LAMC3Q9Y6N6 1575 aa51.42■■■■■ 5.82
BRD7-203ENST00000401491 CADPSQ9ULU8 1353 aa51.23■■■■■ 5.79
BRD7-203ENST00000401491 KIF21AQ7Z4S6 1674 aa51.08■■■■■ 5.77
BRD7-203ENST00000401491 PDS5BQ9NTI5 1447 aa51.02■■■■■ 5.76
BRD7-203ENST00000401491 CCDC88BA6NC98 1476 aa50.96■■■■■ 5.75
BRD7-203ENST00000401491 THOC2Q8NI27 1593 aaKnown RBP50.94■■■■■ 5.74
BRD7-203ENST00000401491 CUX2O14529 1486 aa50.92■■■■■ 5.74
BRD7-203ENST00000401491 CFTRP13569 1480 aa50.92■■■■■ 5.74
BRD7-203ENST00000401491 FANCD2Q9BXW9 1451 aa50.69■■■■■ 5.71
BRD7-203ENST00000401491 CEP164Q9UPV0 1460 aa50.61■■■■■ 5.69
BRD7-203ENST00000401491 MRC2Q9UBG0 1479 aa50.59■■■■■ 5.69
BRD7-203ENST00000401491 SUPT5HO00267 1087 aaKnown RBP50.57■■■■■ 5.69
BRD7-203ENST00000401491 PRDM2Q13029 1718 aa50.56■■■■■ 5.68
BRD7-203ENST00000401491 WDR62O43379 1518 aa50.46■■■■■ 5.67
BRD7-203ENST00000401491 URB2Q14146 1524 aaKnown RBP50.25■■■■■ 5.63
BRD7-203ENST00000401491 TOPBP1Q92547 1522 aa49.88■■■■■ 5.58
BRD7-203ENST00000401491 DNMBPQ6XZF7 1577 aa49.79■■■■■ 5.56
BRD7-203ENST00000401491 ABCC8Q09428 1581 aa49.72■■■■■ 5.55
BRD7-203ENST00000401491 DNAJC5Q9H3Z4 198 aa49.55■■■■■ 5.52
BRD7-203ENST00000401491 IFT140Q96RY7 1462 aa49.54■■■■■ 5.52
BRD7-203ENST00000401491 CUX1P39880 1505 aa49.49■■■■■ 5.51
BRD7-203ENST00000401491 POLA1P09884 1462 aaPredicted RBP49.45■■■■■ 5.51
BRD7-203ENST00000401491 ZNF608Q9ULD9 1512 aaPredicted RBP49.45■■■■■ 5.51
BRD7-203ENST00000401491 TARBP1Q13395 1621 aaKnown RBP49.38■■■■■ 5.5
BRD7-203ENST00000401491 FGD5Q6ZNL6 1462 aa49.32■■■■■ 5.49
BRD7-203ENST00000401491 RAD54L2Q9Y4B4 1467 aa49.28■■■■■ 5.48
BRD7-203ENST00000401491 EIF4G3O43432 1585 aaKnown RBP49.23■■■■■ 5.47
BRD7-203ENST00000401491 SOGA1O94964 1423 aa49.19■■■■■ 5.46
BRD7-203ENST00000401491 AQRO60306 1485 aaKnown RBP eCLIP49.11■■■■■ 5.452e-6■■■■□ 25.5
BRD7-203ENST00000401491 WRNQ14191 1432 aaPredicted RBP eCLIP49.02■■■■■ 5.44
BRD7-203ENST00000401491 SYNJ1O43426 1573 aa49.02■■■■■ 5.44
BRD7-203ENST00000401491 BIVM-ERCC5R4GMW8 1640 aa48.99■■■■■ 5.43
BRD7-203ENST00000401491 TDRD9Q8NDG6 1382 aaKnown RBP48.98■■■■■ 5.43
BRD7-203ENST00000401491 WDR97A6NE52 1622 aa48.97■■■■■ 5.43
BRD7-203ENST00000401491 TOP2BQ02880 1626 aa48.97■■■■■ 5.43
BRD7-203ENST00000401491 ABCA10Q8WWZ4 1543 aa48.79■■■■■ 5.4
BRD7-203ENST00000401491 OSCARQ8IYS5 282 aa48.73■■■■■ 5.39
BRD7-203ENST00000401491 ABCA5Q8WWZ7 1642 aa48.68■■■■■ 5.38
BRD7-203ENST00000401491 CHD1O14646 1710 aa48.66■■■■■ 5.38
BRD7-203ENST00000401491 SNAPC4Q5SXM2 1469 aa48.66■■■■■ 5.38
BRD7-203ENST00000401491 GRIN2BQ13224 1484 aa48.63■■■■■ 5.38
BRD7-203ENST00000401491 GAPVD1Q14C86 1478 aa48.63■■■■■ 5.37
BRD7-203ENST00000401491 PBRM1Q86U86 1689 aa48.62■■■■■ 5.37
BRD7-203ENST00000401491 MAGI1Q96QZ7 1491 aaPredicted RBP48.51■■■■■ 5.36
BRD7-203ENST00000401491 FBLN2P98095 1184 aa48.47■■■■■ 5.35
BRD7-203ENST00000401491 SYNJ2O15056 1496 aa48.34■■■■■ 5.33
BRD7-203ENST00000401491 CHMP7Q8WUX9 453 aaPredicted RBP48.28■■■■■ 5.32
BRD7-203ENST00000401491 ADAMTS12P58397 1594 aa48.22■■■■■ 5.31
BRD7-203ENST00000401491 ERICH3Q5RHP9 1530 aa48.17■■■■■ 5.3
BRD7-203ENST00000401491 RIMBP3CA6NJZ7 1639 aa48.13■■■■■ 5.3
BRD7-203ENST00000401491 RIMBP3BA6NNM3 1639 aa48.13■■■■■ 5.3
BRD7-203ENST00000401491 RIMBP3Q9UFD9 1639 aa48.13■■■■■ 5.3
BRD7-203ENST00000401491 CLASP1Q7Z460 1538 aa48.11■■■■■ 5.29
BRD7-203ENST00000401491 ARHGEF11O15085 1522 aa48.07■■■■■ 5.29
BRD7-203ENST00000401491 GRIN2AQ12879 1464 aa48.04■■■■■ 5.28
BRD7-203ENST00000401491 FHAD1B1AJZ9 1412 aa48.04■■■■■ 5.28
BRD7-203ENST00000401491 KIF27Q86VH2 1401 aa47.97■■■■■ 5.27
BRD7-203ENST00000401491 TRIM41Q8WV44 630 aa47.91■■■■■ 5.26
BRD7-203ENST00000401491 CEP170Q5SW79 1584 aa47.88■■■■■ 5.26
BRD7-203ENST00000401491 IGF1RP08069 1367 aa47.84■■■■■ 5.25
BRD7-203ENST00000401491 NUP160Q12769 1436 aa47.84■■■■■ 5.25
BRD7-203ENST00000401491 CUL7Q14999 1698 aa47.72■■■■■ 5.23
BRD7-203ENST00000401491 ARAP1Q96P48 1450 aa47.7■■■■■ 5.23
BRD7-203ENST00000401491 RUSC2Q8N2Y8 1516 aa47.66■■■■■ 5.22
BRD7-203ENST00000401491 CYB5RLQ6IPT4 315 aa47.57■■■■■ 5.21
BRD7-203ENST00000401491 CARMIL1Q5VZK9 1371 aa47.54■■■■■ 5.2
BRD7-203ENST00000401491 SHROOM2Q13796 1616 aa47.53■■■■■ 5.2
BRD7-203ENST00000401491 ERCC6L2Q5T890 1561 aa47.52■■■■■ 5.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms