RNA–Protein interactions for RNA: ENST00000400830.3

ATAD3A-204, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 5

Gene ATAD3A, Length 603 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-204ENST00000400830 NISCHQ9Y2I1 1504 aa42.65■■■■■ 4.42
ATAD3A-204ENST00000400830 CCDC180Q9P1Z9 1646 aa38.05■■■■□ 3.68
ATAD3A-204ENST00000400830 ABCC9O60706 1549 aa37.89■■■■□ 3.66
ATAD3A-204ENST00000400830 RB1CC1Q8TDY2 1594 aa36.1■■■■□ 3.37
ATAD3A-204ENST00000400830 DCAF8L2P0C7V8 631 aa35.95■■■■□ 3.35
ATAD3A-204ENST00000400830 NACADO15069 1562 aa35.93■■■■□ 3.34
ATAD3A-204ENST00000400830 MYO15BQ96JP2 1530 aa35.5■■■■□ 3.27
ATAD3A-204ENST00000400830 ZCCHC6Q5VYS8 1495 aaKnown RBP35.47■■■■□ 3.27
ATAD3A-204ENST00000400830 PABPN1Q86U42 306 aaKnown RBP eCLIP35.38■■■■□ 3.25
ATAD3A-204ENST00000400830 DNAJC5BQ9UF47 199 aa35.38■■■■□ 3.25
ATAD3A-204ENST00000400830 UNC13AQ9UPW8 1703 aa35.31■■■■□ 3.24
ATAD3A-204ENST00000400830 DCAF1Q9Y4B6 1507 aa35.18■■■■□ 3.22
ATAD3A-204ENST00000400830 BICRAQ9NZM4 1560 aa35.11■■■■□ 3.21
ATAD3A-204ENST00000400830 SCRIBQ14160 1630 aa34.81■■■■□ 3.16
ATAD3A-204ENST00000400830 SHROOM4Q9ULL8 1493 aa34.54■■■■□ 3.12
ATAD3A-204ENST00000400830 EIF4G1Q04637 1599 aaKnown RBP34.19■■■■□ 3.06
ATAD3A-204ENST00000400830 CC2D2AQ9P2K1 1620 aa34.19■■■■□ 3.06
ATAD3A-204ENST00000400830 CECR2Q9BXF3 1484 aa34.07■■■■□ 3.04
ATAD3A-204ENST00000400830 SMARCA4P51532 1647 aa33.2■■■□□ 2.9
ATAD3A-204ENST00000400830 NCAPD3P42695 1498 aa33.19■■■□□ 2.9
ATAD3A-204ENST00000400830 ATAD2BQ9ULI0 1458 aa33.17■■■□□ 2.9
ATAD3A-204ENST00000400830 SMARCA2P51531 1590 aa33.04■■■□□ 2.88
ATAD3A-204ENST00000400830 BAZ1AQ9NRL2 1556 aaPredicted RBP33.04■■■□□ 2.88
ATAD3A-204ENST00000400830 HMGXB3Q12766 1538 aa32.95■■■□□ 2.87
ATAD3A-204ENST00000400830 MROH2BQ7Z745 1585 aa32.91■■■□□ 2.86
ATAD3A-204ENST00000400830 BAZ1BQ9UIG0 1483 aaKnown RBP32.85■■■□□ 2.85
ATAD3A-204ENST00000400830 PEG3Q9GZU2 1588 aa32.83■■■□□ 2.85
ATAD3A-204ENST00000400830 NESP48681 1621 aa32.66■■■□□ 2.82
ATAD3A-204ENST00000400830 ERCC6Q03468 1493 aa32.65■■■□□ 2.82
ATAD3A-204ENST00000400830 RSF1Q96T23 1441 aaPredicted RBP32.6■■■□□ 2.81
ATAD3A-204ENST00000400830 CUX2O14529 1486 aa32.53■■■□□ 2.8
ATAD3A-204ENST00000400830 WIZO95785 1651 aa32.51■■■□□ 2.79
ATAD3A-204ENST00000400830 SUPT5HO00267 1087 aaKnown RBP32.38■■■□□ 2.77
ATAD3A-204ENST00000400830 LAMC3Q9Y6N6 1575 aa32.36■■■□□ 2.77
ATAD3A-204ENST00000400830 DNAJC5Q9H3Z4 198 aa32.36■■■□□ 2.77
ATAD3A-204ENST00000400830 CADPSQ9ULU8 1353 aa32.22■■■□□ 2.75
ATAD3A-204ENST00000400830 THOC2Q8NI27 1593 aaKnown RBP32.2■■■□□ 2.75
ATAD3A-204ENST00000400830 PDS5BQ9NTI5 1447 aa32.2■■■□□ 2.75
ATAD3A-204ENST00000400830 KIF21AQ7Z4S6 1674 aa32.18■■■□□ 2.74
ATAD3A-204ENST00000400830 TOP2AP11388 1531 aaKnown RBP32.1■■■□□ 2.73
ATAD3A-204ENST00000400830 CFTRP13569 1480 aa31.91■■■□□ 2.7
ATAD3A-204ENST00000400830 MRC2Q9UBG0 1479 aa31.91■■■□□ 2.7
ATAD3A-204ENST00000400830 FANCD2Q9BXW9 1451 aa31.86■■■□□ 2.69
ATAD3A-204ENST00000400830 CEP164Q9UPV0 1460 aa31.85■■■□□ 2.69
ATAD3A-204ENST00000400830 WDR62O43379 1518 aa31.81■■■□□ 2.68
ATAD3A-204ENST00000400830 CCDC88BA6NC98 1476 aa31.77■■■□□ 2.68
ATAD3A-204ENST00000400830 URB2Q14146 1524 aaKnown RBP31.6■■■□□ 2.65
ATAD3A-204ENST00000400830 PRDM2Q13029 1718 aa31.55■■■□□ 2.64
ATAD3A-204ENST00000400830 TOPBP1Q92547 1522 aa31.29■■■□□ 2.6
ATAD3A-204ENST00000400830 IFT140Q96RY7 1462 aa31.2■■■□□ 2.58
ATAD3A-204ENST00000400830 ZNF608Q9ULD9 1512 aaPredicted RBP31.19■■■□□ 2.58
ATAD3A-204ENST00000400830 DNMBPQ6XZF7 1577 aa31.18■■■□□ 2.58
ATAD3A-204ENST00000400830 ABCC8Q09428 1581 aa31.17■■■□□ 2.58
ATAD3A-204ENST00000400830 OSCARQ8IYS5 282 aa31.05■■■□□ 2.56
ATAD3A-204ENST00000400830 POLA1P09884 1462 aaPredicted RBP31.01■■■□□ 2.55
ATAD3A-204ENST00000400830 TRIM41Q8WV44 630 aa30.98■■■□□ 2.55
ATAD3A-204ENST00000400830 TARBP1Q13395 1621 aaKnown RBP30.98■■■□□ 2.55
ATAD3A-204ENST00000400830 EIF4G3O43432 1585 aaKnown RBP30.97■■■□□ 2.55
ATAD3A-204ENST00000400830 AQRO60306 1485 aaKnown RBP eCLIP30.94■■■□□ 2.546e-7■■■■■ 30.2
ATAD3A-204ENST00000400830 RAD54L2Q9Y4B4 1467 aa30.93■■■□□ 2.54
ATAD3A-204ENST00000400830 CUX1P39880 1505 aa30.89■■■□□ 2.54
ATAD3A-204ENST00000400830 SOGA1O94964 1423 aa30.87■■■□□ 2.53
ATAD3A-204ENST00000400830 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
ATAD3A-204ENST00000400830 TDRD9Q8NDG6 1382 aaKnown RBP30.8■■■□□ 2.52
ATAD3A-204ENST00000400830 WRNQ14191 1432 aaPredicted RBP eCLIP30.73■■■□□ 2.51
ATAD3A-204ENST00000400830 CHD1O14646 1710 aa30.68■■■□□ 2.5
ATAD3A-204ENST00000400830 FBLN2P98095 1184 aa30.68■■■□□ 2.5
ATAD3A-204ENST00000400830 RIMBP3CA6NJZ7 1639 aa30.68■■■□□ 2.5
ATAD3A-204ENST00000400830 RIMBP3BA6NNM3 1639 aa30.68■■■□□ 2.5
ATAD3A-204ENST00000400830 RIMBP3Q9UFD9 1639 aa30.68■■■□□ 2.5
ATAD3A-204ENST00000400830 SNAPC4Q5SXM2 1469 aa30.62■■■□□ 2.49
ATAD3A-204ENST00000400830 WDR97A6NE52 1622 aa30.6■■■□□ 2.49
ATAD3A-204ENST00000400830 CHIC1Q5VXU3 224 aa30.59■■■□□ 2.49
ATAD3A-204ENST00000400830 ARHGEF11O15085 1522 aa30.58■■■□□ 2.49
ATAD3A-204ENST00000400830 SYNJ1O43426 1573 aa30.58■■■□□ 2.49
ATAD3A-204ENST00000400830 TOP2BQ02880 1626 aa30.55■■■□□ 2.48
ATAD3A-204ENST00000400830 GRIN2BQ13224 1484 aa30.54■■■□□ 2.48
ATAD3A-204ENST00000400830 BIVM-ERCC5R4GMW8 1640 aa30.52■■■□□ 2.48
ATAD3A-204ENST00000400830 ABCA10Q8WWZ4 1543 aa30.5■■■□□ 2.47
ATAD3A-204ENST00000400830 GAPVD1Q14C86 1478 aa30.49■■■□□ 2.47
ATAD3A-204ENST00000400830 MAGI1Q96QZ7 1491 aaPredicted RBP30.49■■■□□ 2.47
ATAD3A-204ENST00000400830 CHMP7Q8WUX9 453 aaPredicted RBP30.47■■■□□ 2.47
ATAD3A-204ENST00000400830 PBRM1Q86U86 1689 aa30.42■■■□□ 2.46
ATAD3A-204ENST00000400830 ABCA5Q8WWZ7 1642 aa30.42■■■□□ 2.46
ATAD3A-204ENST00000400830 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
ATAD3A-204ENST00000400830 CYB5RLQ6IPT4 315 aa30.36■■■□□ 2.45
ATAD3A-204ENST00000400830 CLASP1Q7Z460 1538 aa30.34■■■□□ 2.45
ATAD3A-204ENST00000400830 ARAP1Q96P48 1450 aa30.31■■■□□ 2.44
ATAD3A-204ENST00000400830 ADAMTS12P58397 1594 aa30.18■■■□□ 2.42
ATAD3A-204ENST00000400830 GRIN2AQ12879 1464 aa30.16■■■□□ 2.42
ATAD3A-204ENST00000400830 FHAD1B1AJZ9 1412 aa30.11■■■□□ 2.41
ATAD3A-204ENST00000400830 ERICH3Q5RHP9 1530 aa30.1■■■□□ 2.41
ATAD3A-204ENST00000400830 CEP170Q5SW79 1584 aa30.06■■■□□ 2.4
ATAD3A-204ENST00000400830 KIF27Q86VH2 1401 aa30.05■■■□□ 2.4
ATAD3A-204ENST00000400830 NUP160Q12769 1436 aa30.05■■■□□ 2.4
ATAD3A-204ENST00000400830 ERCC6L2Q5T890 1561 aa29.96■■■□□ 2.39
ATAD3A-204ENST00000400830 RUSC2Q8N2Y8 1516 aa29.96■■■□□ 2.39
ATAD3A-204ENST00000400830 EEA1Q15075 1411 aa29.95■■■□□ 2.38
ATAD3A-204ENST00000400830 FAM9AQ8IZU1 332 aaPredicted RBP29.92■■■□□ 2.38
ATAD3A-204ENST00000400830 TRHP20396 242 aaPredicted RBP29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms