RNA–Protein interactions for RNA: ENST00000400431.2

LINC00598-202, long intergenic non-protein coding RNA 598, humanhuman

TSL 3

Gene LINC00598, Length 183 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-202ENST00000400431 NISCHQ9Y2I1 1504 aa19.77■□□□□ 0.76
LINC00598-202ENST00000400431 CCDC180Q9P1Z9 1646 aa17.75■□□□□ 0.43
LINC00598-202ENST00000400431 ABCC9O60706 1549 aa17.36■□□□□ 0.37
LINC00598-202ENST00000400431 RB1CC1Q8TDY2 1594 aa16.74■□□□□ 0.27
LINC00598-202ENST00000400431 NACADO15069 1562 aa16.68■□□□□ 0.26
LINC00598-202ENST00000400431 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
LINC00598-202ENST00000400431 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
LINC00598-202ENST00000400431 ZCCHC6Q5VYS8 1495 aaKnown RBP16.46■□□□□ 0.23
LINC00598-202ENST00000400431 DCAF1Q9Y4B6 1507 aa16.41■□□□□ 0.22
LINC00598-202ENST00000400431 UNC13AQ9UPW8 1703 aa16.33■□□□□ 0.2
LINC00598-202ENST00000400431 BICRAQ9NZM4 1560 aa16.15■□□□□ 0.18
LINC00598-202ENST00000400431 SHROOM4Q9ULL8 1493 aa16.12■□□□□ 0.17
LINC00598-202ENST00000400431 PABPN1Q86U42 306 aaKnown RBP eCLIP16.12■□□□□ 0.17
LINC00598-202ENST00000400431 SCRIBQ14160 1630 aa16.09■□□□□ 0.17
LINC00598-202ENST00000400431 DNAJC5BQ9UF47 199 aa15.92■□□□□ 0.14
LINC00598-202ENST00000400431 EIF4G1Q04637 1599 aaKnown RBP15.78■□□□□ 0.12
LINC00598-202ENST00000400431 CC2D2AQ9P2K1 1620 aa15.74■□□□□ 0.11
LINC00598-202ENST00000400431 CECR2Q9BXF3 1484 aa15.65■□□□□ 0.1
LINC00598-202ENST00000400431 SMARCA4P51532 1647 aa15.4■□□□□ 0.06
LINC00598-202ENST00000400431 BAZ1AQ9NRL2 1556 aaPredicted RBP15.39■□□□□ 0.05
LINC00598-202ENST00000400431 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
LINC00598-202ENST00000400431 NCAPD3P42695 1498 aa15.33■□□□□ 0.05
LINC00598-202ENST00000400431 ATAD2BQ9ULI0 1458 aa15.31■□□□□ 0.04
LINC00598-202ENST00000400431 HMGXB3Q12766 1538 aa15.31■□□□□ 0.04
LINC00598-202ENST00000400431 PEG3Q9GZU2 1588 aa15.27■□□□□ 0.03
LINC00598-202ENST00000400431 BAZ1BQ9UIG0 1483 aaKnown RBP15.21■□□□□ 0.03
LINC00598-202ENST00000400431 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
LINC00598-202ENST00000400431 ERCC6Q03468 1493 aa15.05■□□□□ -0
LINC00598-202ENST00000400431 WIZO95785 1651 aa15.05■□□□□ -0
LINC00598-202ENST00000400431 LAMC3Q9Y6N6 1575 aa15.02□□□□□ -0.01
LINC00598-202ENST00000400431 RSF1Q96T23 1441 aaPredicted RBP14.97□□□□□ -0.01
LINC00598-202ENST00000400431 NESP48681 1621 aa14.95□□□□□ -0.02
LINC00598-202ENST00000400431 CUX2O14529 1486 aa14.95□□□□□ -0.02
LINC00598-202ENST00000400431 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
LINC00598-202ENST00000400431 PDS5BQ9NTI5 1447 aa14.9□□□□□ -0.02
LINC00598-202ENST00000400431 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
LINC00598-202ENST00000400431 KIF21AQ7Z4S6 1674 aa14.86□□□□□ -0.03
LINC00598-202ENST00000400431 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
LINC00598-202ENST00000400431 CFTRP13569 1480 aa14.76□□□□□ -0.05
LINC00598-202ENST00000400431 PRDM2Q13029 1718 aa14.76□□□□□ -0.05
LINC00598-202ENST00000400431 MRC2Q9UBG0 1479 aa14.75□□□□□ -0.05
LINC00598-202ENST00000400431 CEP164Q9UPV0 1460 aa14.75□□□□□ -0.05
LINC00598-202ENST00000400431 FANCD2Q9BXW9 1451 aa14.72□□□□□ -0.05
LINC00598-202ENST00000400431 WDR62O43379 1518 aa14.71□□□□□ -0.06
LINC00598-202ENST00000400431 CCDC88BA6NC98 1476 aa14.68□□□□□ -0.06
LINC00598-202ENST00000400431 DNAJC5Q9H3Z4 198 aa14.55□□□□□ -0.08
LINC00598-202ENST00000400431 URB2Q14146 1524 aaKnown RBP14.55□□□□□ -0.08
LINC00598-202ENST00000400431 ABCC8Q09428 1581 aa14.52□□□□□ -0.08
LINC00598-202ENST00000400431 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
LINC00598-202ENST00000400431 TOPBP1Q92547 1522 aa14.46□□□□□ -0.09
LINC00598-202ENST00000400431 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
LINC00598-202ENST00000400431 SUPT5HO00267 1087 aaKnown RBP14.43□□□□□ -0.1
LINC00598-202ENST00000400431 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
LINC00598-202ENST00000400431 POLA1P09884 1462 aaPredicted RBP14.33□□□□□ -0.12
LINC00598-202ENST00000400431 TARBP1Q13395 1621 aaKnown RBP14.33□□□□□ -0.12
LINC00598-202ENST00000400431 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
LINC00598-202ENST00000400431 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
LINC00598-202ENST00000400431 CUX1P39880 1505 aa14.29□□□□□ -0.12
LINC00598-202ENST00000400431 FGD5Q6ZNL6 1462 aa14.27□□□□□ -0.12
LINC00598-202ENST00000400431 SOGA1O94964 1423 aa14.24□□□□□ -0.13
LINC00598-202ENST00000400431 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
LINC00598-202ENST00000400431 RAD54L2Q9Y4B4 1467 aa14.21□□□□□ -0.13
LINC00598-202ENST00000400431 AQRO60306 1485 aaKnown RBP eCLIP14.2□□□□□ -0.14
LINC00598-202ENST00000400431 BIVM-ERCC5R4GMW8 1640 aa14.19□□□□□ -0.14
LINC00598-202ENST00000400431 CHD1O14646 1710 aa14.18□□□□□ -0.14
LINC00598-202ENST00000400431 TOP2BQ02880 1626 aa14.18□□□□□ -0.14
LINC00598-202ENST00000400431 WRNQ14191 1432 aaPredicted RBP eCLIP14.16□□□□□ -0.14
LINC00598-202ENST00000400431 PBRM1Q86U86 1689 aa14.15□□□□□ -0.14
LINC00598-202ENST00000400431 GRIN2BQ13224 1484 aa14.15□□□□□ -0.14
LINC00598-202ENST00000400431 MAGI1Q96QZ7 1491 aaPredicted RBP14.15□□□□□ -0.14
LINC00598-202ENST00000400431 TDRD9Q8NDG6 1382 aaKnown RBP14.15□□□□□ -0.14
LINC00598-202ENST00000400431 ABCA10Q8WWZ4 1543 aa14.15□□□□□ -0.14
LINC00598-202ENST00000400431 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
LINC00598-202ENST00000400431 ABCA5Q8WWZ7 1642 aa14.12□□□□□ -0.15
LINC00598-202ENST00000400431 SYNJ1O43426 1573 aa14.12□□□□□ -0.15
LINC00598-202ENST00000400431 GAPVD1Q14C86 1478 aa14.11□□□□□ -0.15
LINC00598-202ENST00000400431 SYNJ2O15056 1496 aa14.07□□□□□ -0.16
LINC00598-202ENST00000400431 FBLN2P98095 1184 aa14.07□□□□□ -0.16
LINC00598-202ENST00000400431 RIMBP3CA6NJZ7 1639 aa14.06□□□□□ -0.16
LINC00598-202ENST00000400431 RIMBP3BA6NNM3 1639 aa14.06□□□□□ -0.16
LINC00598-202ENST00000400431 RIMBP3Q9UFD9 1639 aa14.06□□□□□ -0.16
LINC00598-202ENST00000400431 ARHGEF11O15085 1522 aa14.04□□□□□ -0.16
LINC00598-202ENST00000400431 CHMP7Q8WUX9 453 aaPredicted RBP14.03□□□□□ -0.16
LINC00598-202ENST00000400431 ADAMTS12P58397 1594 aa14□□□□□ -0.17
LINC00598-202ENST00000400431 ERICH3Q5RHP9 1530 aa14□□□□□ -0.17
LINC00598-202ENST00000400431 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
LINC00598-202ENST00000400431 TRIM41Q8WV44 630 aa14□□□□□ -0.17
LINC00598-202ENST00000400431 GRIN2AQ12879 1464 aa13.95□□□□□ -0.18
LINC00598-202ENST00000400431 FHAD1B1AJZ9 1412 aa13.95□□□□□ -0.18
LINC00598-202ENST00000400431 ARAP1Q96P48 1450 aa13.9□□□□□ -0.18
LINC00598-202ENST00000400431 KIF27Q86VH2 1401 aa13.9□□□□□ -0.19
LINC00598-202ENST00000400431 CUL7Q14999 1698 aa13.89□□□□□ -0.19
LINC00598-202ENST00000400431 NUP160Q12769 1436 aa13.89□□□□□ -0.19
LINC00598-202ENST00000400431 CEP170Q5SW79 1584 aa13.88□□□□□ -0.19
LINC00598-202ENST00000400431 CYB5RLQ6IPT4 315 aa13.84□□□□□ -0.19
LINC00598-202ENST00000400431 SHROOM2Q13796 1616 aa13.83□□□□□ -0.2
LINC00598-202ENST00000400431 RUSC2Q8N2Y8 1516 aa13.8□□□□□ -0.2
LINC00598-202ENST00000400431 IGF1RP08069 1367 aa13.77□□□□□ -0.21
LINC00598-202ENST00000400431 ERCC6L2Q5T890 1561 aa13.73□□□□□ -0.21
LINC00598-202ENST00000400431 KIAA0586Q9BVV6 1533 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms