RNA–Protein interactions for RNA: ENST00000400318.6

LSM14B-205, Transcript of LSM family member 14B, humanhuman

TSL 1 (best)

Gene LSM14B, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14B-205ENST00000400318 NISCHQ9Y2I1 1504 aa65.04■■■■■ 8
LSM14B-205ENST00000400318 CCDC180Q9P1Z9 1646 aa58.14■■■■■ 6.9
LSM14B-205ENST00000400318 ABCC9O60706 1549 aa57.75■■■■■ 6.83
LSM14B-205ENST00000400318 RB1CC1Q8TDY2 1594 aa55.17■■■■■ 6.42
LSM14B-205ENST00000400318 NACADO15069 1562 aa54.89■■■■■ 6.38
LSM14B-205ENST00000400318 DCAF8L2P0C7V8 631 aa54.79■■■■■ 6.36
LSM14B-205ENST00000400318 MYO15BQ96JP2 1530 aa54.28■■■■■ 6.28
LSM14B-205ENST00000400318 ZCCHC6Q5VYS8 1495 aaKnown RBP54.01■■■■■ 6.24
LSM14B-205ENST00000400318 PABPN1Q86U42 306 aaKnown RBP eCLIP53.84■■■■■ 6.21
LSM14B-205ENST00000400318 UNC13AQ9UPW8 1703 aa53.79■■■■■ 6.2
LSM14B-205ENST00000400318 DCAF1Q9Y4B6 1507 aa53.75■■■■■ 6.2
LSM14B-205ENST00000400318 DNAJC5BQ9UF47 199 aa53.69■■■■■ 6.19
LSM14B-205ENST00000400318 BICRAQ9NZM4 1560 aa53.48■■■■■ 6.15
LSM14B-205ENST00000400318 SCRIBQ14160 1630 aa53.04■■■■■ 6.08
LSM14B-205ENST00000400318 SHROOM4Q9ULL8 1493 aa52.88■■■■■ 6.06
LSM14B-205ENST00000400318 EIF4G1Q04637 1599 aaKnown RBP52.17■■■■■ 5.94
LSM14B-205ENST00000400318 CC2D2AQ9P2K1 1620 aa52.15■■■■■ 5.94
LSM14B-205ENST00000400318 CECR2Q9BXF3 1484 aa51.98■■■■■ 5.91
LSM14B-205ENST00000400318 NCAPD3P42695 1498 aa50.66■■■■■ 5.7
LSM14B-205ENST00000400318 SMARCA4P51532 1647 aa50.63■■■■■ 5.7
LSM14B-205ENST00000400318 ATAD2BQ9ULI0 1458 aa50.58■■■■■ 5.69
LSM14B-205ENST00000400318 SMARCA2P51531 1590 aa50.49■■■■■ 5.67
LSM14B-205ENST00000400318 BAZ1AQ9NRL2 1556 aaPredicted RBP50.48■■■■■ 5.67
LSM14B-205ENST00000400318 HMGXB3Q12766 1538 aa50.34■■■■■ 5.65
LSM14B-205ENST00000400318 BAZ1BQ9UIG0 1483 aaKnown RBP50.15■■■■■ 5.62
LSM14B-205ENST00000400318 PEG3Q9GZU2 1588 aa50.12■■■■■ 5.61
LSM14B-205ENST00000400318 MROH2BQ7Z745 1585 aa50.11■■■■■ 5.61
LSM14B-205ENST00000400318 ERCC6Q03468 1493 aa49.88■■■■■ 5.57
LSM14B-205ENST00000400318 NESP48681 1621 aa49.71■■■■■ 5.55
LSM14B-205ENST00000400318 CUX2O14529 1486 aa49.58■■■■■ 5.53
LSM14B-205ENST00000400318 WIZO95785 1651 aa49.51■■■■■ 5.52
LSM14B-205ENST00000400318 LAMC3Q9Y6N6 1575 aa49.45■■■■■ 5.51
LSM14B-205ENST00000400318 RSF1Q96T23 1441 aaPredicted RBP49.26■■■■■ 5.48
LSM14B-205ENST00000400318 PDS5BQ9NTI5 1447 aa49.2■■■■■ 5.47
LSM14B-205ENST00000400318 CADPSQ9ULU8 1353 aa49.17■■■■■ 5.46
LSM14B-205ENST00000400318 THOC2Q8NI27 1593 aaKnown RBP49.09■■■■■ 5.45
LSM14B-205ENST00000400318 KIF21AQ7Z4S6 1674 aa49.05■■■■■ 5.44
LSM14B-205ENST00000400318 DNAJC5Q9H3Z4 198 aa49.02■■■■■ 5.44
LSM14B-205ENST00000400318 TOP2AP11388 1531 aaKnown RBP48.96■■■■■ 5.43
LSM14B-205ENST00000400318 MRC2Q9UBG0 1479 aa48.74■■■■■ 5.39
LSM14B-205ENST00000400318 CFTRP13569 1480 aa48.69■■■■■ 5.39
LSM14B-205ENST00000400318 CEP164Q9UPV0 1460 aa48.64■■■■■ 5.38
LSM14B-205ENST00000400318 FANCD2Q9BXW9 1451 aa48.61■■■■■ 5.37
LSM14B-205ENST00000400318 WDR62O43379 1518 aa48.56■■■■■ 5.36
LSM14B-205ENST00000400318 CCDC88BA6NC98 1476 aa48.39■■■■■ 5.34
LSM14B-205ENST00000400318 PRDM2Q13029 1718 aa48.17■■■■■ 5.3
LSM14B-205ENST00000400318 URB2Q14146 1524 aaKnown RBP48.16■■■■■ 5.3
LSM14B-205ENST00000400318 TOPBP1Q92547 1522 aa47.72■■■■■ 5.23
LSM14B-205ENST00000400318 ABCC8Q09428 1581 aa47.69■■■■■ 5.22
LSM14B-205ENST00000400318 IFT140Q96RY7 1462 aa47.65■■■■■ 5.22
LSM14B-205ENST00000400318 DNMBPQ6XZF7 1577 aa47.6■■■■■ 5.21
LSM14B-205ENST00000400318 SUPT5HO00267 1087 aaKnown RBP47.49■■■■■ 5.19
LSM14B-205ENST00000400318 ZNF608Q9ULD9 1512 aaPredicted RBP47.49■■■■■ 5.19
LSM14B-205ENST00000400318 OSCARQ8IYS5 282 aa47.43■■■■■ 5.18
LSM14B-205ENST00000400318 POLA1P09884 1462 aaPredicted RBP47.27■■■■■ 5.16
LSM14B-205ENST00000400318 EIF4G3O43432 1585 aaKnown RBP47.25■■■■■ 5.15
LSM14B-205ENST00000400318 TARBP1Q13395 1621 aaKnown RBP47.23■■■■■ 5.15
LSM14B-205ENST00000400318 AQRO60306 1485 aaKnown RBP eCLIP47.14■■■■■ 5.141e-6■■■■□ 21.8
LSM14B-205ENST00000400318 TRIM41Q8WV44 630 aa47.12■■■■■ 5.13
LSM14B-205ENST00000400318 SOGA1O94964 1423 aa47.09■■■■■ 5.13
LSM14B-205ENST00000400318 RAD54L2Q9Y4B4 1467 aa47.08■■■■■ 5.13
LSM14B-205ENST00000400318 CUX1P39880 1505 aa47.06■■■■■ 5.12
LSM14B-205ENST00000400318 FGD5Q6ZNL6 1462 aa47.05■■■■■ 5.12
LSM14B-205ENST00000400318 TDRD9Q8NDG6 1382 aaKnown RBP46.94■■■■■ 5.1
LSM14B-205ENST00000400318 WDR97A6NE52 1622 aa46.83■■■■■ 5.09
LSM14B-205ENST00000400318 FBLN2P98095 1184 aa46.8■■■■■ 5.08
LSM14B-205ENST00000400318 CHD1O14646 1710 aa46.78■■■■■ 5.08
LSM14B-205ENST00000400318 RIMBP3CA6NJZ7 1639 aa46.69■■■■■ 5.07
LSM14B-205ENST00000400318 RIMBP3BA6NNM3 1639 aa46.69■■■■■ 5.07
LSM14B-205ENST00000400318 RIMBP3Q9UFD9 1639 aa46.69■■■■■ 5.07
LSM14B-205ENST00000400318 SNAPC4Q5SXM2 1469 aa46.68■■■■■ 5.06
LSM14B-205ENST00000400318 GRIN2BQ13224 1484 aa46.63■■■■■ 5.06
LSM14B-205ENST00000400318 ARHGEF11O15085 1522 aa46.63■■■■■ 5.05
LSM14B-205ENST00000400318 MAGI1Q96QZ7 1491 aaPredicted RBP46.58■■■■■ 5.05
LSM14B-205ENST00000400318 ABCA10Q8WWZ4 1543 aa46.54■■■■■ 5.04
LSM14B-205ENST00000400318 GAPVD1Q14C86 1478 aa46.53■■■■■ 5.04
LSM14B-205ENST00000400318 CHMP7Q8WUX9 453 aaPredicted RBP46.52■■■■■ 5.04
LSM14B-205ENST00000400318 WRNQ14191 1432 aaPredicted RBP eCLIP46.5■■■■■ 5.03
LSM14B-205ENST00000400318 TOP2BQ02880 1626 aa46.43■■■■■ 5.02
LSM14B-205ENST00000400318 SYNJ2O15056 1496 aa46.42■■■■■ 5.02
LSM14B-205ENST00000400318 PBRM1Q86U86 1689 aa46.41■■■■■ 5.02
LSM14B-205ENST00000400318 BIVM-ERCC5R4GMW8 1640 aa46.41■■■■■ 5.02
LSM14B-205ENST00000400318 ABCA5Q8WWZ7 1642 aa46.39■■■■■ 5.02
LSM14B-205ENST00000400318 SYNJ1O43426 1573 aa46.38■■■■■ 5.01
LSM14B-205ENST00000400318 CYB5RLQ6IPT4 315 aa46.29■■■■■ 5
LSM14B-205ENST00000400318 CLASP1Q7Z460 1538 aa46.28■■■■■ 5
LSM14B-205ENST00000400318 ARAP1Q96P48 1450 aa46.19■■■■■ 4.99
LSM14B-205ENST00000400318 ADAMTS12P58397 1594 aa46.04■■■■■ 4.96
LSM14B-205ENST00000400318 GRIN2AQ12879 1464 aa46.02■■■■■ 4.96
LSM14B-205ENST00000400318 ERICH3Q5RHP9 1530 aa45.98■■■■■ 4.95
LSM14B-205ENST00000400318 FHAD1B1AJZ9 1412 aa45.96■■■■■ 4.95
LSM14B-205ENST00000400318 NUP160Q12769 1436 aa45.84■■■■■ 4.93
LSM14B-205ENST00000400318 CEP170Q5SW79 1584 aa45.8■■■■■ 4.92
LSM14B-205ENST00000400318 TRHP20396 242 aaPredicted RBP45.66■■■■■ 4.9
LSM14B-205ENST00000400318 KIF27Q86VH2 1401 aa45.6■■■■■ 4.89
LSM14B-205ENST00000400318 ERCC6L2Q5T890 1561 aa45.58■■■■■ 4.89
LSM14B-205ENST00000400318 SHROOM2Q13796 1616 aa45.55■■■■■ 4.88
LSM14B-205ENST00000400318 IGF1RP08069 1367 aa45.48■■■■■ 4.87
LSM14B-205ENST00000400318 JPH4Q96JJ6 628 aa45.4■■■■■ 4.86
LSM14B-205ENST00000400318 CUL7Q14999 1698 aa45.39■■■■■ 4.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms