RNA–Protein interactions for RNA: ENST00000400098.6

SNRPN-204, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 4

Gene SNRPN, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-204ENST00000400098 NISCHQ9Y2I1 1504 aa21.78■■□□□ 1.08
SNRPN-204ENST00000400098 CCDC180Q9P1Z9 1646 aa19.4■□□□□ 0.7
SNRPN-204ENST00000400098 ABCC9O60706 1549 aa18.92■□□□□ 0.62
SNRPN-204ENST00000400098 RB1CC1Q8TDY2 1594 aa18.19■□□□□ 0.5
SNRPN-204ENST00000400098 ZCCHC6Q5VYS8 1495 aaKnown RBP18.16■□□□□ 0.5
SNRPN-204ENST00000400098 NACADO15069 1562 aa18.16■□□□□ 0.5
SNRPN-204ENST00000400098 DCAF8L2P0C7V8 631 aa18.12■□□□□ 0.49
SNRPN-204ENST00000400098 MYO15BQ96JP2 1530 aa18.02■□□□□ 0.47
SNRPN-204ENST00000400098 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
SNRPN-204ENST00000400098 UNC13AQ9UPW8 1703 aa17.95■□□□□ 0.46
SNRPN-204ENST00000400098 SCRIBQ14160 1630 aa17.73■□□□□ 0.43
SNRPN-204ENST00000400098 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
SNRPN-204ENST00000400098 PABPN1Q86U42 306 aaKnown RBP eCLIP17.65■□□□□ 0.42
SNRPN-204ENST00000400098 SHROOM4Q9ULL8 1493 aa17.38■□□□□ 0.37
SNRPN-204ENST00000400098 AEBP2Q6ZN18 517 aaPredicted RBP17.31■□□□□ 0.36
SNRPN-204ENST00000400098 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
SNRPN-204ENST00000400098 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
SNRPN-204ENST00000400098 CC2D2AQ9P2K1 1620 aa17.14■□□□□ 0.33
SNRPN-204ENST00000400098 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
SNRPN-204ENST00000400098 SMARCA4P51532 1647 aa16.94■□□□□ 0.3
SNRPN-204ENST00000400098 BAZ1AQ9NRL2 1556 aaPredicted RBP16.87■□□□□ 0.29
SNRPN-204ENST00000400098 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
SNRPN-204ENST00000400098 ATAD2BQ9ULI0 1458 aa16.78■□□□□ 0.28
SNRPN-204ENST00000400098 SMARCA2P51531 1590 aa16.75■□□□□ 0.27
SNRPN-204ENST00000400098 PEG3Q9GZU2 1588 aa16.73■□□□□ 0.27
SNRPN-204ENST00000400098 NCAPD3P42695 1498 aa16.72■□□□□ 0.27
SNRPN-204ENST00000400098 WIZO95785 1651 aa16.7■□□□□ 0.26
SNRPN-204ENST00000400098 HMGXB3Q12766 1538 aa16.69■□□□□ 0.26
SNRPN-204ENST00000400098 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
SNRPN-204ENST00000400098 RSF1Q96T23 1441 aaPredicted RBP16.59■□□□□ 0.25
SNRPN-204ENST00000400098 TOP2AP11388 1531 aaKnown RBP16.45■□□□□ 0.22
SNRPN-204ENST00000400098 NESP48681 1621 aa16.41■□□□□ 0.22
SNRPN-204ENST00000400098 LAMC3Q9Y6N6 1575 aa16.33■□□□□ 0.2
SNRPN-204ENST00000400098 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
SNRPN-204ENST00000400098 ERCC6Q03468 1493 aa16.25■□□□□ 0.19
SNRPN-204ENST00000400098 CCDC88BA6NC98 1476 aa16.24■□□□□ 0.19
SNRPN-204ENST00000400098 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
SNRPN-204ENST00000400098 CHIC1Q5VXU3 224 aa16.22■□□□□ 0.19
SNRPN-204ENST00000400098 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
SNRPN-204ENST00000400098 SUPT5HO00267 1087 aaKnown RBP16.19■□□□□ 0.18
SNRPN-204ENST00000400098 THOC2Q8NI27 1593 aaKnown RBP16.18■□□□□ 0.18
SNRPN-204ENST00000400098 CFTRP13569 1480 aa16.16■□□□□ 0.18
SNRPN-204ENST00000400098 PDS5BQ9NTI5 1447 aa16.14■□□□□ 0.17
SNRPN-204ENST00000400098 FANCD2Q9BXW9 1451 aa16.09■□□□□ 0.17
SNRPN-204ENST00000400098 CEP164Q9UPV0 1460 aa16.07■□□□□ 0.16
SNRPN-204ENST00000400098 CUX2O14529 1486 aa16.05■□□□□ 0.16
SNRPN-204ENST00000400098 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
SNRPN-204ENST00000400098 WDR62O43379 1518 aa16.01■□□□□ 0.15
SNRPN-204ENST00000400098 URB2Q14146 1524 aaKnown RBP15.97■□□□□ 0.15
SNRPN-204ENST00000400098 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
SNRPN-204ENST00000400098 DNMBPQ6XZF7 1577 aa15.85■□□□□ 0.13
SNRPN-204ENST00000400098 ABCC8Q09428 1581 aa15.78■□□□□ 0.12
SNRPN-204ENST00000400098 CUX1P39880 1505 aa15.78■□□□□ 0.12
SNRPN-204ENST00000400098 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
SNRPN-204ENST00000400098 POLA1P09884 1462 aaPredicted RBP15.72■□□□□ 0.11
SNRPN-204ENST00000400098 FGD5Q6ZNL6 1462 aa15.71■□□□□ 0.1
SNRPN-204ENST00000400098 ZNF608Q9ULD9 1512 aaPredicted RBP15.7■□□□□ 0.1
SNRPN-204ENST00000400098 IFT140Q96RY7 1462 aa15.7■□□□□ 0.1
SNRPN-204ENST00000400098 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
SNRPN-204ENST00000400098 BIVM-ERCC5R4GMW8 1640 aa15.68■□□□□ 0.1
SNRPN-204ENST00000400098 EIF4G3O43432 1585 aaKnown RBP15.67■□□□□ 0.1
SNRPN-204ENST00000400098 RAD54L2Q9Y4B4 1467 aa15.67■□□□□ 0.1
SNRPN-204ENST00000400098 WDR97A6NE52 1622 aa15.67■□□□□ 0.1
SNRPN-204ENST00000400098 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
SNRPN-204ENST00000400098 WRNQ14191 1432 aaPredicted RBP eCLIP15.62■□□□□ 0.09
SNRPN-204ENST00000400098 SOGA1O94964 1423 aa15.61■□□□□ 0.09
SNRPN-204ENST00000400098 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
SNRPN-204ENST00000400098 PBRM1Q86U86 1689 aa15.56■□□□□ 0.08
SNRPN-204ENST00000400098 TDRD9Q8NDG6 1382 aaKnown RBP15.53■□□□□ 0.08
SNRPN-204ENST00000400098 ABCA5Q8WWZ7 1642 aa15.53■□□□□ 0.08
SNRPN-204ENST00000400098 CHD1O14646 1710 aa15.52■□□□□ 0.08
SNRPN-204ENST00000400098 ABCA10Q8WWZ4 1543 aa15.52■□□□□ 0.07
SNRPN-204ENST00000400098 DNAJC5Q9H3Z4 198 aa15.47■□□□□ 0.07
SNRPN-204ENST00000400098 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.06
SNRPN-204ENST00000400098 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
SNRPN-204ENST00000400098 GRIN2BQ13224 1484 aa15.43■□□□□ 0.06
SNRPN-204ENST00000400098 MAGI1Q96QZ7 1491 aaPredicted RBP15.39■□□□□ 0.05
SNRPN-204ENST00000400098 ADAMTS12P58397 1594 aa15.37■□□□□ 0.05
SNRPN-204ENST00000400098 FBLN2P98095 1184 aa15.34■□□□□ 0.05
SNRPN-204ENST00000400098 SYNJ2O15056 1496 aa15.33■□□□□ 0.05
SNRPN-204ENST00000400098 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.05
SNRPN-204ENST00000400098 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
SNRPN-204ENST00000400098 CHMP7Q8WUX9 453 aaPredicted RBP15.27■□□□□ 0.04
SNRPN-204ENST00000400098 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.03
SNRPN-204ENST00000400098 GRIN2AQ12879 1464 aa15.27■□□□□ 0.03
SNRPN-204ENST00000400098 KIF27Q86VH2 1401 aa15.26■□□□□ 0.03
SNRPN-204ENST00000400098 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
SNRPN-204ENST00000400098 CUL7Q14999 1698 aa15.25■□□□□ 0.03
SNRPN-204ENST00000400098 RIMBP3CA6NJZ7 1639 aa15.25■□□□□ 0.03
SNRPN-204ENST00000400098 RIMBP3BA6NNM3 1639 aa15.25■□□□□ 0.03
SNRPN-204ENST00000400098 RIMBP3Q9UFD9 1639 aa15.25■□□□□ 0.03
SNRPN-204ENST00000400098 FHAD1B1AJZ9 1412 aa15.25■□□□□ 0.03
SNRPN-204ENST00000400098 CEP170Q5SW79 1584 aa15.24■□□□□ 0.03
SNRPN-204ENST00000400098 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
SNRPN-204ENST00000400098 IGF1RP08069 1367 aa15.21■□□□□ 0.02
SNRPN-204ENST00000400098 ARHGEF11O15085 1522 aa15.2■□□□□ 0.02
SNRPN-204ENST00000400098 NUP160Q12769 1436 aa15.17■□□□□ 0.02
SNRPN-204ENST00000400098 SHROOM2Q13796 1616 aa15.13■□□□□ 0.01
SNRPN-204ENST00000400098 CARMIL1Q5VZK9 1371 aa15.11■□□□□ 0.01
SNRPN-204ENST00000400098 ERCC6L2Q5T890 1561 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms