RNA–Protein interactions for RNA: ENST00000399560.2

ZNF35-203, Transcript of zinc finger protein 35, humanhuman

TSL 4 BASIC

Gene ZNF35, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF35-203ENST00000399560 NISCHQ9Y2I1 1504 aa27.01■■□□□ 1.91
ZNF35-203ENST00000399560 ABCC9O60706 1549 aa24.41■■□□□ 1.5
ZNF35-203ENST00000399560 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
ZNF35-203ENST00000399560 DNAJC5BQ9UF47 199 aa23.23■■□□□ 1.31
ZNF35-203ENST00000399560 RB1CC1Q8TDY2 1594 aa23.14■■□□□ 1.3
ZNF35-203ENST00000399560 NACADO15069 1562 aa22.98■■□□□ 1.27
ZNF35-203ENST00000399560 PABPN1Q86U42 306 aaKnown RBP eCLIP22.73■■□□□ 1.23
ZNF35-203ENST00000399560 DCAF8L2P0C7V8 631 aa22.72■■□□□ 1.23
ZNF35-203ENST00000399560 UNC13AQ9UPW8 1703 aa22.71■■□□□ 1.23
ZNF35-203ENST00000399560 MYO15BQ96JP2 1530 aa22.68■■□□□ 1.22
ZNF35-203ENST00000399560 BICRAQ9NZM4 1560 aa22.62■■□□□ 1.21
ZNF35-203ENST00000399560 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
ZNF35-203ENST00000399560 DCAF1Q9Y4B6 1507 aa22.32■■□□□ 1.16
ZNF35-203ENST00000399560 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
ZNF35-203ENST00000399560 CC2D2AQ9P2K1 1620 aa22.07■■□□□ 1.12
ZNF35-203ENST00000399560 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
ZNF35-203ENST00000399560 CECR2Q9BXF3 1484 aa22.02■■□□□ 1.12
ZNF35-203ENST00000399560 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
ZNF35-203ENST00000399560 DNAJC5Q9H3Z4 198 aa21.37■■□□□ 1.01
ZNF35-203ENST00000399560 NCAPD3P42695 1498 aa21.29■■□□□ 1
ZNF35-203ENST00000399560 ATAD2BQ9ULI0 1458 aa21.17■□□□□ 0.98
ZNF35-203ENST00000399560 CUX2O14529 1486 aa21.11■□□□□ 0.97
ZNF35-203ENST00000399560 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
ZNF35-203ENST00000399560 HMGXB3Q12766 1538 aa21.05■□□□□ 0.96
ZNF35-203ENST00000399560 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
ZNF35-203ENST00000399560 ERCC6Q03468 1493 aa21■□□□□ 0.95
ZNF35-203ENST00000399560 NESP48681 1621 aa20.98■□□□□ 0.95
ZNF35-203ENST00000399560 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
ZNF35-203ENST00000399560 BAZ1AQ9NRL2 1556 aaPredicted RBP20.92■□□□□ 0.94
ZNF35-203ENST00000399560 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
ZNF35-203ENST00000399560 MROH2BQ7Z745 1585 aa20.83■□□□□ 0.92
ZNF35-203ENST00000399560 THOC2Q8NI27 1593 aaKnown RBP20.78■□□□□ 0.92
ZNF35-203ENST00000399560 LAMC3Q9Y6N6 1575 aa20.76■□□□□ 0.91
ZNF35-203ENST00000399560 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
ZNF35-203ENST00000399560 PDS5BQ9NTI5 1447 aa20.61■□□□□ 0.89
ZNF35-203ENST00000399560 CADPSQ9ULU8 1353 aa20.59■□□□□ 0.89
ZNF35-203ENST00000399560 WIZO95785 1651 aa20.54■□□□□ 0.88
ZNF35-203ENST00000399560 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
ZNF35-203ENST00000399560 WDR62O43379 1518 aa20.46■□□□□ 0.87
ZNF35-203ENST00000399560 CFTRP13569 1480 aa20.35■□□□□ 0.85
ZNF35-203ENST00000399560 RSF1Q96T23 1441 aaPredicted RBP20.35■□□□□ 0.85
ZNF35-203ENST00000399560 FANCD2Q9BXW9 1451 aa20.32■□□□□ 0.84
ZNF35-203ENST00000399560 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
ZNF35-203ENST00000399560 TOP2AP11388 1531 aaKnown RBP20.23■□□□□ 0.83
ZNF35-203ENST00000399560 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
ZNF35-203ENST00000399560 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
ZNF35-203ENST00000399560 OSCARQ8IYS5 282 aa20.12■□□□□ 0.81
ZNF35-203ENST00000399560 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
ZNF35-203ENST00000399560 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
ZNF35-203ENST00000399560 ZNF608Q9ULD9 1512 aaPredicted RBP20■□□□□ 0.79
ZNF35-203ENST00000399560 IFT140Q96RY7 1462 aa19.95■□□□□ 0.78
ZNF35-203ENST00000399560 TOPBP1Q92547 1522 aa19.94■□□□□ 0.78
ZNF35-203ENST00000399560 RIMBP3CA6NJZ7 1639 aa19.89■□□□□ 0.77
ZNF35-203ENST00000399560 RIMBP3BA6NNM3 1639 aa19.89■□□□□ 0.77
ZNF35-203ENST00000399560 RIMBP3Q9UFD9 1639 aa19.89■□□□□ 0.77
ZNF35-203ENST00000399560 ABCC8Q09428 1581 aa19.84■□□□□ 0.77
ZNF35-203ENST00000399560 DNMBPQ6XZF7 1577 aa19.83■□□□□ 0.76
ZNF35-203ENST00000399560 TARBP1Q13395 1621 aaKnown RBP19.81■□□□□ 0.76
ZNF35-203ENST00000399560 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
ZNF35-203ENST00000399560 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
ZNF35-203ENST00000399560 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.76
ZNF35-203ENST00000399560 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
ZNF35-203ENST00000399560 CHD1O14646 1710 aa19.7■□□□□ 0.74
ZNF35-203ENST00000399560 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
ZNF35-203ENST00000399560 CYB5RLQ6IPT4 315 aa19.65■□□□□ 0.74
ZNF35-203ENST00000399560 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
ZNF35-203ENST00000399560 SOGA1O94964 1423 aa19.62■□□□□ 0.73
ZNF35-203ENST00000399560 TDRD9Q8NDG6 1382 aaKnown RBP19.61■□□□□ 0.73
ZNF35-203ENST00000399560 CUX1P39880 1505 aa19.56■□□□□ 0.72
ZNF35-203ENST00000399560 FGD5Q6ZNL6 1462 aa19.56■□□□□ 0.72
ZNF35-203ENST00000399560 FBLN2P98095 1184 aa19.55■□□□□ 0.72
ZNF35-203ENST00000399560 CLASP1Q7Z460 1538 aa19.53■□□□□ 0.72
ZNF35-203ENST00000399560 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
ZNF35-203ENST00000399560 SNAPC4Q5SXM2 1469 aa19.53■□□□□ 0.72
ZNF35-203ENST00000399560 MAGI1Q96QZ7 1491 aaPredicted RBP19.47■□□□□ 0.71
ZNF35-203ENST00000399560 GRIN2BQ13224 1484 aa19.45■□□□□ 0.7
ZNF35-203ENST00000399560 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
ZNF35-203ENST00000399560 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
ZNF35-203ENST00000399560 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
ZNF35-203ENST00000399560 TRHP20396 242 aaPredicted RBP19.39■□□□□ 0.69
ZNF35-203ENST00000399560 GAPVD1Q14C86 1478 aa19.36■□□□□ 0.69
ZNF35-203ENST00000399560 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
ZNF35-203ENST00000399560 PBRM1Q86U86 1689 aa19.34■□□□□ 0.69
ZNF35-203ENST00000399560 ABCA5Q8WWZ7 1642 aa19.34■□□□□ 0.69
ZNF35-203ENST00000399560 ERCC6L2Q5T890 1561 aa19.23■□□□□ 0.67
ZNF35-203ENST00000399560 NUP160Q12769 1436 aa19.21■□□□□ 0.67
ZNF35-203ENST00000399560 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
ZNF35-203ENST00000399560 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
ZNF35-203ENST00000399560 SUPT5HO00267 1087 aaKnown RBP19.19■□□□□ 0.66
ZNF35-203ENST00000399560 CEP170Q5SW79 1584 aa19.18■□□□□ 0.66
ZNF35-203ENST00000399560 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
ZNF35-203ENST00000399560 BIVM-ERCC5R4GMW8 1640 aa19.18■□□□□ 0.66
ZNF35-203ENST00000399560 ADAMTS12P58397 1594 aa19.17■□□□□ 0.66
ZNF35-203ENST00000399560 SHROOM2Q13796 1616 aa19.14■□□□□ 0.65
ZNF35-203ENST00000399560 FHAD1B1AJZ9 1412 aa19.12■□□□□ 0.65
ZNF35-203ENST00000399560 ERICH3Q5RHP9 1530 aa19.09■□□□□ 0.65
ZNF35-203ENST00000399560 JPH4Q96JJ6 628 aa18.98■□□□□ 0.63
ZNF35-203ENST00000399560 PRG4Q92954 1404 aaPredicted RBP18.98■□□□□ 0.63
ZNF35-203ENST00000399560 KIF13AQ9H1H9 1805 aa18.95■□□□□ 0.62
ZNF35-203ENST00000399560 RUSC2Q8N2Y8 1516 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms