RNA–Protein interactions for RNA: ENST00000399379.7

AMT-203, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-203ENST00000399379 NISCHQ9Y2I1 1504 aa36.93■■■■□ 3.5
AMT-203ENST00000399379 CCDC180Q9P1Z9 1646 aa33.1■■■□□ 2.89
AMT-203ENST00000399379 ABCC9O60706 1549 aa32.91■■■□□ 2.86
AMT-203ENST00000399379 RB1CC1Q8TDY2 1594 aa31.46■■■□□ 2.63
AMT-203ENST00000399379 NACADO15069 1562 aa31.28■■■□□ 2.6
AMT-203ENST00000399379 DCAF8L2P0C7V8 631 aa31.14■■■□□ 2.58
AMT-203ENST00000399379 MYO15BQ96JP2 1530 aa30.92■■■□□ 2.54
AMT-203ENST00000399379 DNAJC5BQ9UF47 199 aa30.68■■■□□ 2.5
AMT-203ENST00000399379 PABPN1Q86U42 306 aaKnown RBP eCLIP30.66■■■□□ 2.53e-6■■■■□ 23.3
AMT-203ENST00000399379 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.5
AMT-203ENST00000399379 ZCCHC6Q5VYS8 1495 aaKnown RBP30.63■■■□□ 2.49
AMT-203ENST00000399379 DCAF1Q9Y4B6 1507 aa30.56■■■□□ 2.48
AMT-203ENST00000399379 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
AMT-203ENST00000399379 SHROOM4Q9ULL8 1493 aa30.19■■■□□ 2.42
AMT-203ENST00000399379 SCRIBQ14160 1630 aa30.12■■■□□ 2.41
AMT-203ENST00000399379 CC2D2AQ9P2K1 1620 aa29.74■■■□□ 2.35
AMT-203ENST00000399379 EIF4G1Q04637 1599 aaKnown RBP29.73■■■□□ 2.35
AMT-203ENST00000399379 CECR2Q9BXF3 1484 aa29.67■■■□□ 2.34
AMT-203ENST00000399379 NCAPD3P42695 1498 aa28.86■■■□□ 2.21
AMT-203ENST00000399379 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
AMT-203ENST00000399379 SMARCA4P51532 1647 aa28.77■■■□□ 2.2
AMT-203ENST00000399379 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
AMT-203ENST00000399379 BAZ1AQ9NRL2 1556 aaPredicted RBP28.7■■■□□ 2.18
AMT-203ENST00000399379 HMGXB3Q12766 1538 aa28.66■■■□□ 2.18
AMT-203ENST00000399379 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
AMT-203ENST00000399379 PEG3Q9GZU2 1588 aa28.51■■■□□ 2.15
AMT-203ENST00000399379 ERCC6Q03468 1493 aa28.47■■■□□ 2.15
AMT-203ENST00000399379 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
AMT-203ENST00000399379 CUX2O14529 1486 aa28.39■■■□□ 2.13
AMT-203ENST00000399379 NESP48681 1621 aa28.29■■■□□ 2.12
AMT-203ENST00000399379 LAMC3Q9Y6N6 1575 aa28.2■■■□□ 2.11
AMT-203ENST00000399379 DNAJC5Q9H3Z4 198 aa28.16■■■□□ 2.1
AMT-203ENST00000399379 WIZO95785 1651 aa28.08■■■□□ 2.09
AMT-203ENST00000399379 PDS5BQ9NTI5 1447 aa28.07■■■□□ 2.08
AMT-203ENST00000399379 CADPSQ9ULU8 1353 aa28■■■□□ 2.07
AMT-203ENST00000399379 THOC2Q8NI27 1593 aaKnown RBP27.99■■■□□ 2.07
AMT-203ENST00000399379 KIF21AQ7Z4S6 1674 aa27.93■■■□□ 2.06
AMT-203ENST00000399379 RSF1Q96T23 1441 aaPredicted RBP27.92■■■□□ 2.06
AMT-203ENST00000399379 TOP2AP11388 1531 aaKnown RBP27.79■■■□□ 2.04
AMT-203ENST00000399379 MRC2Q9UBG0 1479 aa27.76■■■□□ 2.04
AMT-203ENST00000399379 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.03
AMT-203ENST00000399379 CFTRP13569 1480 aa27.7■■■□□ 2.02
AMT-203ENST00000399379 WDR62O43379 1518 aa27.68■■■□□ 2.02
AMT-203ENST00000399379 FANCD2Q9BXW9 1451 aa27.67■■■□□ 2.02
AMT-203ENST00000399379 CCDC88BA6NC98 1476 aa27.45■■□□□ 1.99
AMT-203ENST00000399379 PRDM2Q13029 1718 aa27.42■■□□□ 1.98
AMT-203ENST00000399379 URB2Q14146 1524 aaKnown RBP27.39■■□□□ 1.98
AMT-203ENST00000399379 ABCC8Q09428 1581 aa27.19■■□□□ 1.94
AMT-203ENST00000399379 IFT140Q96RY7 1462 aa27.16■■□□□ 1.94
AMT-203ENST00000399379 TOPBP1Q92547 1522 aa27.15■■□□□ 1.94
AMT-203ENST00000399379 OSCARQ8IYS5 282 aa27.12■■□□□ 1.93
AMT-203ENST00000399379 DNMBPQ6XZF7 1577 aa27.07■■□□□ 1.92
AMT-203ENST00000399379 ZNF608Q9ULD9 1512 aaPredicted RBP27.01■■□□□ 1.91
AMT-203ENST00000399379 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
AMT-203ENST00000399379 EIF4G3O43432 1585 aaKnown RBP26.89■■□□□ 1.9
AMT-203ENST00000399379 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
AMT-203ENST00000399379 TARBP1Q13395 1621 aaKnown RBP26.87■■□□□ 1.89
AMT-203ENST00000399379 SUPT5HO00267 1087 aaKnown RBP26.81■■□□□ 1.88
AMT-203ENST00000399379 AQRO60306 1485 aaKnown RBP eCLIP26.81■■□□□ 1.888e-7■■■■□ 24.7
AMT-203ENST00000399379 SOGA1O94964 1423 aa26.79■■□□□ 1.88
AMT-203ENST00000399379 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
AMT-203ENST00000399379 FGD5Q6ZNL6 1462 aa26.73■■□□□ 1.87
AMT-203ENST00000399379 CUX1P39880 1505 aa26.7■■□□□ 1.87
AMT-203ENST00000399379 WDR97A6NE52 1622 aa26.7■■□□□ 1.86
AMT-203ENST00000399379 TDRD9Q8NDG6 1382 aaKnown RBP26.68■■□□□ 1.86
AMT-203ENST00000399379 RIMBP3CA6NJZ7 1639 aa26.68■■□□□ 1.86
AMT-203ENST00000399379 RIMBP3BA6NNM3 1639 aa26.68■■□□□ 1.86
AMT-203ENST00000399379 RIMBP3Q9UFD9 1639 aa26.68■■□□□ 1.86
AMT-203ENST00000399379 FBLN2P98095 1184 aa26.66■■□□□ 1.86
AMT-203ENST00000399379 CHD1O14646 1710 aa26.65■■□□□ 1.86
AMT-203ENST00000399379 ARHGEF11O15085 1522 aa26.62■■□□□ 1.85
AMT-203ENST00000399379 SNAPC4Q5SXM2 1469 aa26.56■■□□□ 1.84
AMT-203ENST00000399379 GRIN2BQ13224 1484 aa26.55■■□□□ 1.84
AMT-203ENST00000399379 MAGI1Q96QZ7 1491 aaPredicted RBP26.54■■□□□ 1.84
AMT-203ENST00000399379 CHMP7Q8WUX9 453 aaPredicted RBP26.51■■□□□ 1.83
AMT-203ENST00000399379 GAPVD1Q14C86 1478 aa26.46■■□□□ 1.83
AMT-203ENST00000399379 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
AMT-203ENST00000399379 CYB5RLQ6IPT4 315 aa26.44■■□□□ 1.82
AMT-203ENST00000399379 SYNJ2O15056 1496 aa26.43■■□□□ 1.82
AMT-203ENST00000399379 SYNJ1O43426 1573 aa26.43■■□□□ 1.82
AMT-203ENST00000399379 WRNQ14191 1432 aaPredicted RBP eCLIP26.41■■□□□ 1.82
AMT-203ENST00000399379 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
AMT-203ENST00000399379 ABCA5Q8WWZ7 1642 aa26.37■■□□□ 1.81
AMT-203ENST00000399379 CLASP1Q7Z460 1538 aa26.37■■□□□ 1.81
AMT-203ENST00000399379 ARAP1Q96P48 1450 aa26.36■■□□□ 1.81
AMT-203ENST00000399379 TOP2BQ02880 1626 aa26.35■■□□□ 1.81
AMT-203ENST00000399379 BIVM-ERCC5R4GMW8 1640 aa26.34■■□□□ 1.81
AMT-203ENST00000399379 GRIN2AQ12879 1464 aa26.18■■□□□ 1.78
AMT-203ENST00000399379 ADAMTS12P58397 1594 aa26.17■■□□□ 1.78
AMT-203ENST00000399379 FHAD1B1AJZ9 1412 aa26.15■■□□□ 1.78
AMT-203ENST00000399379 ERICH3Q5RHP9 1530 aa26.14■■□□□ 1.78
AMT-203ENST00000399379 TRHP20396 242 aaPredicted RBP26.13■■□□□ 1.77
AMT-203ENST00000399379 NUP160Q12769 1436 aa26.09■■□□□ 1.77
AMT-203ENST00000399379 CEP170Q5SW79 1584 aa26.04■■□□□ 1.76
AMT-203ENST00000399379 SHROOM2Q13796 1616 aa25.93■■□□□ 1.74
AMT-203ENST00000399379 ERCC6L2Q5T890 1561 aa25.9■■□□□ 1.74
AMT-203ENST00000399379 KIF27Q86VH2 1401 aa25.89■■□□□ 1.74
AMT-203ENST00000399379 JPH4Q96JJ6 628 aa25.85■■□□□ 1.73
AMT-203ENST00000399379 PRG4Q92954 1404 aaPredicted RBP25.83■■□□□ 1.73
AMT-203ENST00000399379 IGF1RP08069 1367 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms