RNA–Protein interactions for RNA: ENST00000399158.2

MED28P1-201, Transcript of mediator complex subunit 28 pseudogene 1, humanhuman

BASIC

Gene MED28P1, Length 571 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28P1-201ENST00000399158 NISCHQ9Y2I1 1504 aa19.93■□□□□ 0.78
MED28P1-201ENST00000399158 CCDC180Q9P1Z9 1646 aa17.41■□□□□ 0.38
MED28P1-201ENST00000399158 CHIC1Q5VXU3 224 aa17.37■□□□□ 0.37
MED28P1-201ENST00000399158 AEBP2Q6ZN18 517 aaPredicted RBP17.11■□□□□ 0.33
MED28P1-201ENST00000399158 ZCCHC6Q5VYS8 1495 aaKnown RBP16.75■□□□□ 0.27
MED28P1-201ENST00000399158 DCAF1Q9Y4B6 1507 aa16.5■□□□□ 0.23
MED28P1-201ENST00000399158 ABCC9O60706 1549 aa16.4■□□□□ 0.22
MED28P1-201ENST00000399158 DCAF8L2P0C7V8 631 aa16.32■□□□□ 0.2
MED28P1-201ENST00000399158 MYO15BQ96JP2 1530 aa16.31■□□□□ 0.2
MED28P1-201ENST00000399158 NACADO15069 1562 aa16.19■□□□□ 0.18
MED28P1-201ENST00000399158 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
MED28P1-201ENST00000399158 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
MED28P1-201ENST00000399158 SCRIBQ14160 1630 aa15.95■□□□□ 0.14
MED28P1-201ENST00000399158 UNC13AQ9UPW8 1703 aa15.79■□□□□ 0.12
MED28P1-201ENST00000399158 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
MED28P1-201ENST00000399158 SUPT5HO00267 1087 aaKnown RBP15.52■□□□□ 0.08
MED28P1-201ENST00000399158 CECR2Q9BXF3 1484 aa15.49■□□□□ 0.07
MED28P1-201ENST00000399158 RSF1Q96T23 1441 aaPredicted RBP15.45■□□□□ 0.06
MED28P1-201ENST00000399158 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
MED28P1-201ENST00000399158 MROH2BQ7Z745 1585 aa15.4■□□□□ 0.06
MED28P1-201ENST00000399158 PHF23Q9BUL5 403 aaPredicted RBP15.39■□□□□ 0.05
MED28P1-201ENST00000399158 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
MED28P1-201ENST00000399158 SMARCA4P51532 1647 aa15.33■□□□□ 0.04
MED28P1-201ENST00000399158 WIZO95785 1651 aa15.28■□□□□ 0.04
MED28P1-201ENST00000399158 PEG3Q9GZU2 1588 aa15.17■□□□□ 0.02
MED28P1-201ENST00000399158 TOP2AP11388 1531 aaKnown RBP15.11■□□□□ 0.01
MED28P1-201ENST00000399158 EIF4G1Q04637 1599 aaKnown RBP15.1■□□□□ 0.01
MED28P1-201ENST00000399158 ATAD2BQ9ULI0 1458 aa15.07■□□□□ 0
MED28P1-201ENST00000399158 SMARCA2P51531 1590 aa15.04■□□□□ -0
MED28P1-201ENST00000399158 CCDC88BA6NC98 1476 aa14.95□□□□□ -0.02
MED28P1-201ENST00000399158 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
MED28P1-201ENST00000399158 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
MED28P1-201ENST00000399158 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
MED28P1-201ENST00000399158 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
MED28P1-201ENST00000399158 ABCC8Q09428 1581 aa14.63□□□□□ -0.07
MED28P1-201ENST00000399158 TRIM41Q8WV44 630 aa14.61□□□□□ -0.07
MED28P1-201ENST00000399158 CFTRP13569 1480 aa14.61□□□□□ -0.07
MED28P1-201ENST00000399158 PRDM2Q13029 1718 aa14.58□□□□□ -0.08
MED28P1-201ENST00000399158 CADPSQ9ULU8 1353 aa14.53□□□□□ -0.08
MED28P1-201ENST00000399158 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
MED28P1-201ENST00000399158 WRNQ14191 1432 aaPredicted RBP eCLIP14.5□□□□□ -0.09
MED28P1-201ENST00000399158 SYNJ1O43426 1573 aa14.5□□□□□ -0.09
MED28P1-201ENST00000399158 BIVM-ERCC5R4GMW8 1640 aa14.45□□□□□ -0.1
MED28P1-201ENST00000399158 TOP2BQ02880 1626 aa14.44□□□□□ -0.1
MED28P1-201ENST00000399158 LAMC3Q9Y6N6 1575 aa14.43□□□□□ -0.1
MED28P1-201ENST00000399158 NESP48681 1621 aa14.42□□□□□ -0.1
MED28P1-201ENST00000399158 PLPPR3Q6T4P5 718 aa14.42□□□□□ -0.1
MED28P1-201ENST00000399158 CUX1P39880 1505 aa14.4□□□□□ -0.1
MED28P1-201ENST00000399158 FANCD2Q9BXW9 1451 aa14.37□□□□□ -0.11
MED28P1-201ENST00000399158 SENP3Q9H4L4 574 aaPredicted RBP14.35□□□□□ -0.11
MED28P1-201ENST00000399158 SOGA1O94964 1423 aa14.34□□□□□ -0.11
MED28P1-201ENST00000399158 LOC105371045A0A1W2PR82 267 aa14.34□□□□□ -0.11
MED28P1-201ENST00000399158 FAM9AQ8IZU1 332 aaPredicted RBP14.33□□□□□ -0.12
MED28P1-201ENST00000399158 RUSC2Q8N2Y8 1516 aa14.31□□□□□ -0.12
MED28P1-201ENST00000399158 EEA1Q15075 1411 aa14.3□□□□□ -0.12
MED28P1-201ENST00000399158 KIF21AQ7Z4S6 1674 aa14.28□□□□□ -0.12
MED28P1-201ENST00000399158 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.12
MED28P1-201ENST00000399158 PDS5BQ9NTI5 1447 aa14.27□□□□□ -0.12
MED28P1-201ENST00000399158 DNMBPQ6XZF7 1577 aa14.26□□□□□ -0.13
MED28P1-201ENST00000399158 TOPBP1Q92547 1522 aa14.23□□□□□ -0.13
MED28P1-201ENST00000399158 URB2Q14146 1524 aaKnown RBP14.22□□□□□ -0.13
MED28P1-201ENST00000399158 FGD5Q6ZNL6 1462 aa14.22□□□□□ -0.13
MED28P1-201ENST00000399158 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
MED28P1-201ENST00000399158 POLA1P09884 1462 aaPredicted RBP14.16□□□□□ -0.14
MED28P1-201ENST00000399158 KIF21BO75037 1637 aa14.15□□□□□ -0.14
MED28P1-201ENST00000399158 KIF27Q86VH2 1401 aa14.14□□□□□ -0.15
MED28P1-201ENST00000399158 MRC2Q9UBG0 1479 aa14.12□□□□□ -0.15
MED28P1-201ENST00000399158 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
MED28P1-201ENST00000399158 RAD54L2Q9Y4B4 1467 aa14.11□□□□□ -0.15
MED28P1-201ENST00000399158 ABCA10Q8WWZ4 1543 aa14.1□□□□□ -0.15
MED28P1-201ENST00000399158 CUX2O14529 1486 aa14.1□□□□□ -0.15
MED28P1-201ENST00000399158 GOLGA3Q08378 1498 aa14.1□□□□□ -0.15
MED28P1-201ENST00000399158 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
MED28P1-201ENST00000399158 PRXQ9BXM0 1461 aa14.08□□□□□ -0.16
MED28P1-201ENST00000399158 WDR62O43379 1518 aa14.07□□□□□ -0.16
MED28P1-201ENST00000399158 TNIKQ9UKE5 1360 aa14.07□□□□□ -0.16
MED28P1-201ENST00000399158 TARBP1Q13395 1621 aaKnown RBP14.06□□□□□ -0.16
MED28P1-201ENST00000399158 ERICH3Q5RHP9 1530 aa14.05□□□□□ -0.16
MED28P1-201ENST00000399158 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
MED28P1-201ENST00000399158 RAPGEF2Q9Y4G8 1499 aa14.05□□□□□ -0.16
MED28P1-201ENST00000399158 IGF1RP08069 1367 aa14.04□□□□□ -0.16
MED28P1-201ENST00000399158 ABCA5Q8WWZ7 1642 aa14.02□□□□□ -0.16
MED28P1-201ENST00000399158 ERCC6Q03468 1493 aa14.01□□□□□ -0.17
MED28P1-201ENST00000399158 CEP162Q5TB80 1403 aa13.97□□□□□ -0.17
MED28P1-201ENST00000399158 UBTFP17480 764 aaKnown RBP13.96□□□□□ -0.17
MED28P1-201ENST00000399158 CARMIL1Q5VZK9 1371 aa13.95□□□□□ -0.18
MED28P1-201ENST00000399158 CUL7Q14999 1698 aa13.95□□□□□ -0.18
MED28P1-201ENST00000399158 GAPVD1Q14C86 1478 aa13.94□□□□□ -0.18
MED28P1-201ENST00000399158 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
MED28P1-201ENST00000399158 TDRD9Q8NDG6 1382 aaKnown RBP13.94□□□□□ -0.18
MED28P1-201ENST00000399158 PBRM1Q86U86 1689 aa13.91□□□□□ -0.18
MED28P1-201ENST00000399158 ZNF608Q9ULD9 1512 aaPredicted RBP13.88□□□□□ -0.19
MED28P1-201ENST00000399158 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.19
MED28P1-201ENST00000399158 CLIP1P30622 1438 aa13.86□□□□□ -0.19
MED28P1-201ENST00000399158 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.19
MED28P1-201ENST00000399158 GRIN2BQ13224 1484 aa13.83□□□□□ -0.2
MED28P1-201ENST00000399158 ADAMTS12P58397 1594 aa13.82□□□□□ -0.2
MED28P1-201ENST00000399158 CTTNBP2Q8WZ74 1663 aa13.81□□□□□ -0.2
MED28P1-201ENST00000399158 FHAD1B1AJZ9 1412 aa13.79□□□□□ -0.2
MED28P1-201ENST00000399158 ARAP1Q96P48 1450 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms