RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 NISCHQ9Y2I1 1504 aa25.3■■□□□ 1.64
CYCSP55-201ENST00000399027 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
CYCSP55-201ENST00000399027 ABCC9O60706 1549 aa21.71■■□□□ 1.07
CYCSP55-201ENST00000399027 ZCCHC6Q5VYS8 1495 aaKnown RBP21.13■□□□□ 0.97
CYCSP55-201ENST00000399027 NACADO15069 1562 aa21.07■□□□□ 0.96
CYCSP55-201ENST00000399027 RB1CC1Q8TDY2 1594 aa21.05■□□□□ 0.96
CYCSP55-201ENST00000399027 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
CYCSP55-201ENST00000399027 DCAF1Q9Y4B6 1507 aa21■□□□□ 0.95
CYCSP55-201ENST00000399027 DCAF8L2P0C7V8 631 aa20.87■□□□□ 0.93
CYCSP55-201ENST00000399027 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
CYCSP55-201ENST00000399027 SCRIBQ14160 1630 aa20.46■□□□□ 0.87
CYCSP55-201ENST00000399027 BICRAQ9NZM4 1560 aa20.43■□□□□ 0.86
CYCSP55-201ENST00000399027 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
CYCSP55-201ENST00000399027 PABPN1Q86U42 306 aaKnown RBP eCLIP20.24■□□□□ 0.83
CYCSP55-201ENST00000399027 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
CYCSP55-201ENST00000399027 DNAJC5BQ9UF47 199 aa19.74■□□□□ 0.75
CYCSP55-201ENST00000399027 CC2D2AQ9P2K1 1620 aa19.73■□□□□ 0.75
CYCSP55-201ENST00000399027 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
CYCSP55-201ENST00000399027 SMARCA4P51532 1647 aa19.63■□□□□ 0.73
CYCSP55-201ENST00000399027 BAZ1AQ9NRL2 1556 aaPredicted RBP19.61■□□□□ 0.73
CYCSP55-201ENST00000399027 MROH2BQ7Z745 1585 aa19.49■□□□□ 0.71
CYCSP55-201ENST00000399027 PEG3Q9GZU2 1588 aa19.47■□□□□ 0.71
CYCSP55-201ENST00000399027 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
CYCSP55-201ENST00000399027 ATAD2BQ9ULI0 1458 aa19.42■□□□□ 0.7
CYCSP55-201ENST00000399027 CHIC1Q5VXU3 224 aa19.41■□□□□ 0.7
CYCSP55-201ENST00000399027 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
CYCSP55-201ENST00000399027 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
CYCSP55-201ENST00000399027 WIZO95785 1651 aa19.33■□□□□ 0.68
CYCSP55-201ENST00000399027 RSF1Q96T23 1441 aaPredicted RBP19.3■□□□□ 0.68
CYCSP55-201ENST00000399027 BAZ1BQ9UIG0 1483 aaKnown RBP19.27■□□□□ 0.67
CYCSP55-201ENST00000399027 AEBP2Q6ZN18 517 aaPredicted RBP19.26■□□□□ 0.67
CYCSP55-201ENST00000399027 TOP2AP11388 1531 aaKnown RBP19.12■□□□□ 0.65
CYCSP55-201ENST00000399027 LAMC3Q9Y6N6 1575 aa18.92■□□□□ 0.62
CYCSP55-201ENST00000399027 NESP48681 1621 aa18.85■□□□□ 0.61
CYCSP55-201ENST00000399027 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
CYCSP55-201ENST00000399027 PRDM2Q13029 1718 aa18.81■□□□□ 0.6
CYCSP55-201ENST00000399027 CADPSQ9ULU8 1353 aa18.81■□□□□ 0.6
CYCSP55-201ENST00000399027 SUPT5HO00267 1087 aaKnown RBP18.8■□□□□ 0.6
CYCSP55-201ENST00000399027 CFTRP13569 1480 aa18.77■□□□□ 0.6
CYCSP55-201ENST00000399027 KIF21AQ7Z4S6 1674 aa18.75■□□□□ 0.59
CYCSP55-201ENST00000399027 PDS5BQ9NTI5 1447 aa18.7■□□□□ 0.58
CYCSP55-201ENST00000399027 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
CYCSP55-201ENST00000399027 THOC2Q8NI27 1593 aaKnown RBP18.64■□□□□ 0.57
CYCSP55-201ENST00000399027 FANCD2Q9BXW9 1451 aa18.6■□□□□ 0.57
CYCSP55-201ENST00000399027 CEP164Q9UPV0 1460 aa18.58■□□□□ 0.57
CYCSP55-201ENST00000399027 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.56
CYCSP55-201ENST00000399027 WDR62O43379 1518 aa18.51■□□□□ 0.55
CYCSP55-201ENST00000399027 CUX2O14529 1486 aa18.51■□□□□ 0.55
CYCSP55-201ENST00000399027 URB2Q14146 1524 aaKnown RBP18.43■□□□□ 0.54
CYCSP55-201ENST00000399027 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
CYCSP55-201ENST00000399027 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
CYCSP55-201ENST00000399027 TOPBP1Q92547 1522 aa18.35■□□□□ 0.53
CYCSP55-201ENST00000399027 CUX1P39880 1505 aa18.28■□□□□ 0.52
CYCSP55-201ENST00000399027 BIVM-ERCC5R4GMW8 1640 aa18.24■□□□□ 0.51
CYCSP55-201ENST00000399027 TOP2BQ02880 1626 aa18.21■□□□□ 0.51
CYCSP55-201ENST00000399027 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
CYCSP55-201ENST00000399027 TARBP1Q13395 1621 aaKnown RBP18.2■□□□□ 0.5
CYCSP55-201ENST00000399027 SYNJ1O43426 1573 aa18.19■□□□□ 0.5
CYCSP55-201ENST00000399027 IFT140Q96RY7 1462 aa18.19■□□□□ 0.5
CYCSP55-201ENST00000399027 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
CYCSP55-201ENST00000399027 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
CYCSP55-201ENST00000399027 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
CYCSP55-201ENST00000399027 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.49
CYCSP55-201ENST00000399027 RAD54L2Q9Y4B4 1467 aa18.08■□□□□ 0.49
CYCSP55-201ENST00000399027 SOGA1O94964 1423 aa18.08■□□□□ 0.49
CYCSP55-201ENST00000399027 ZNF608Q9ULD9 1512 aaPredicted RBP18.07■□□□□ 0.48
CYCSP55-201ENST00000399027 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
CYCSP55-201ENST00000399027 ABCA5Q8WWZ7 1642 aa18■□□□□ 0.47
CYCSP55-201ENST00000399027 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
CYCSP55-201ENST00000399027 AQRO60306 1485 aaKnown RBP eCLIP17.96■□□□□ 0.47
CYCSP55-201ENST00000399027 TDRD9Q8NDG6 1382 aaKnown RBP17.93■□□□□ 0.46
CYCSP55-201ENST00000399027 GAPVD1Q14C86 1478 aa17.9■□□□□ 0.46
CYCSP55-201ENST00000399027 GRIN2BQ13224 1484 aa17.88■□□□□ 0.45
CYCSP55-201ENST00000399027 CHD1O14646 1710 aa17.86■□□□□ 0.45
CYCSP55-201ENST00000399027 MAGI1Q96QZ7 1491 aaPredicted RBP17.84■□□□□ 0.45
CYCSP55-201ENST00000399027 ERICH3Q5RHP9 1530 aa17.83■□□□□ 0.45
CYCSP55-201ENST00000399027 SNAPC4Q5SXM2 1469 aa17.83■□□□□ 0.45
CYCSP55-201ENST00000399027 KIF27Q86VH2 1401 aa17.79■□□□□ 0.44
CYCSP55-201ENST00000399027 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
CYCSP55-201ENST00000399027 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
CYCSP55-201ENST00000399027 SYNJ2O15056 1496 aa17.76■□□□□ 0.43
CYCSP55-201ENST00000399027 CUL7Q14999 1698 aa17.74■□□□□ 0.43
CYCSP55-201ENST00000399027 FHAD1B1AJZ9 1412 aa17.7■□□□□ 0.42
CYCSP55-201ENST00000399027 RUSC2Q8N2Y8 1516 aa17.67■□□□□ 0.42
CYCSP55-201ENST00000399027 IGF1RP08069 1367 aa17.67■□□□□ 0.42
CYCSP55-201ENST00000399027 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
CYCSP55-201ENST00000399027 GRIN2AQ12879 1464 aa17.67■□□□□ 0.42
CYCSP55-201ENST00000399027 DNAJC5Q9H3Z4 198 aa17.66■□□□□ 0.42
CYCSP55-201ENST00000399027 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
CYCSP55-201ENST00000399027 CLASP1Q7Z460 1538 aa17.63■□□□□ 0.41
CYCSP55-201ENST00000399027 FBLN2P98095 1184 aa17.63■□□□□ 0.41
CYCSP55-201ENST00000399027 CEP170Q5SW79 1584 aa17.61■□□□□ 0.41
CYCSP55-201ENST00000399027 NUP160Q12769 1436 aa17.59■□□□□ 0.41
CYCSP55-201ENST00000399027 EEA1Q15075 1411 aa17.58■□□□□ 0.41
CYCSP55-201ENST00000399027 CARMIL1Q5VZK9 1371 aa17.57■□□□□ 0.4
CYCSP55-201ENST00000399027 RAPGEF2Q9Y4G8 1499 aa17.52■□□□□ 0.4
CYCSP55-201ENST00000399027 PRXQ9BXM0 1461 aa17.51■□□□□ 0.39
CYCSP55-201ENST00000399027 SHROOM2Q13796 1616 aa17.51■□□□□ 0.39
CYCSP55-201ENST00000399027 RIMBP3CA6NJZ7 1639 aa17.49■□□□□ 0.39
CYCSP55-201ENST00000399027 RIMBP3BA6NNM3 1639 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms