RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 NISCHQ9Y2I1 1504 aa35.53■■■■□ 3.28
COL13A1-204ENST00000398975 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
COL13A1-204ENST00000398975 ABCC9O60706 1549 aa31.04■■■□□ 2.56
COL13A1-204ENST00000398975 RB1CC1Q8TDY2 1594 aa29.76■■■□□ 2.35
COL13A1-204ENST00000398975 NACADO15069 1562 aa29.71■■■□□ 2.35
COL13A1-204ENST00000398975 DCAF8L2P0C7V8 631 aa29.65■■■□□ 2.34
COL13A1-204ENST00000398975 ZCCHC6Q5VYS8 1495 aaKnown RBP29.59■■■□□ 2.33
COL13A1-204ENST00000398975 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
COL13A1-204ENST00000398975 DCAF1Q9Y4B6 1507 aa29.35■■■□□ 2.29
COL13A1-204ENST00000398975 UNC13AQ9UPW8 1703 aa29.21■■■□□ 2.27
COL13A1-204ENST00000398975 PABPN1Q86U42 306 aaKnown RBP eCLIP29■■■□□ 2.23
COL13A1-204ENST00000398975 BICRAQ9NZM4 1560 aa28.99■■■□□ 2.23
COL13A1-204ENST00000398975 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
COL13A1-204ENST00000398975 DNAJC5BQ9UF47 199 aa28.66■■■□□ 2.18
COL13A1-204ENST00000398975 SHROOM4Q9ULL8 1493 aa28.51■■■□□ 2.15
COL13A1-204ENST00000398975 EIF4G1Q04637 1599 aaKnown RBP28.16■■■□□ 2.1
COL13A1-204ENST00000398975 CC2D2AQ9P2K1 1620 aa28.08■■■□□ 2.09
COL13A1-204ENST00000398975 CECR2Q9BXF3 1484 aa27.87■■■□□ 2.05
COL13A1-204ENST00000398975 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
COL13A1-204ENST00000398975 BAZ1AQ9NRL2 1556 aaPredicted RBP27.5■■□□□ 1.99
COL13A1-204ENST00000398975 ATAD2BQ9ULI0 1458 aa27.46■■□□□ 1.99
COL13A1-204ENST00000398975 NCAPD3P42695 1498 aa27.44■■□□□ 1.98
COL13A1-204ENST00000398975 MROH2BQ7Z745 1585 aa27.43■■□□□ 1.98
COL13A1-204ENST00000398975 SMARCA2P51531 1590 aa27.37■■□□□ 1.97
COL13A1-204ENST00000398975 PEG3Q9GZU2 1588 aa27.31■■□□□ 1.96
COL13A1-204ENST00000398975 HMGXB3Q12766 1538 aa27.29■■□□□ 1.96
COL13A1-204ENST00000398975 BAZ1BQ9UIG0 1483 aaKnown RBP27.19■■□□□ 1.94
COL13A1-204ENST00000398975 WIZO95785 1651 aa27.13■■□□□ 1.93
COL13A1-204ENST00000398975 RSF1Q96T23 1441 aaPredicted RBP27.06■■□□□ 1.92
COL13A1-204ENST00000398975 NESP48681 1621 aa26.89■■□□□ 1.9
COL13A1-204ENST00000398975 TOP2AP11388 1531 aaKnown RBP26.78■■□□□ 1.88
COL13A1-204ENST00000398975 LAMC3Q9Y6N6 1575 aa26.71■■□□□ 1.87
COL13A1-204ENST00000398975 ERCC6Q03468 1493 aa26.68■■□□□ 1.86
COL13A1-204ENST00000398975 CADPSQ9ULU8 1353 aa26.61■■□□□ 1.85
COL13A1-204ENST00000398975 KIF21AQ7Z4S6 1674 aa26.55■■□□□ 1.84
COL13A1-204ENST00000398975 CCDC88BA6NC98 1476 aa26.49■■□□□ 1.83
COL13A1-204ENST00000398975 PDS5BQ9NTI5 1447 aa26.48■■□□□ 1.83
COL13A1-204ENST00000398975 THOC2Q8NI27 1593 aaKnown RBP26.48■■□□□ 1.83
COL13A1-204ENST00000398975 CFTRP13569 1480 aa26.47■■□□□ 1.83
COL13A1-204ENST00000398975 CUX2O14529 1486 aa26.44■■□□□ 1.82
COL13A1-204ENST00000398975 FANCD2Q9BXW9 1451 aa26.33■■□□□ 1.81
COL13A1-204ENST00000398975 MRC2Q9UBG0 1479 aa26.28■■□□□ 1.8
COL13A1-204ENST00000398975 CEP164Q9UPV0 1460 aa26.28■■□□□ 1.8
COL13A1-204ENST00000398975 PRDM2Q13029 1718 aa26.26■■□□□ 1.79
COL13A1-204ENST00000398975 SUPT5HO00267 1087 aaKnown RBP26.25■■□□□ 1.79
COL13A1-204ENST00000398975 WDR62O43379 1518 aa26.22■■□□□ 1.79
COL13A1-204ENST00000398975 URB2Q14146 1524 aaKnown RBP26.13■■□□□ 1.77
COL13A1-204ENST00000398975 TOPBP1Q92547 1522 aa25.92■■□□□ 1.74
COL13A1-204ENST00000398975 DNMBPQ6XZF7 1577 aa25.86■■□□□ 1.73
COL13A1-204ENST00000398975 ABCC8Q09428 1581 aa25.81■■□□□ 1.72
COL13A1-204ENST00000398975 DNAJC5Q9H3Z4 198 aa25.77■■□□□ 1.72
COL13A1-204ENST00000398975 CUX1P39880 1505 aa25.73■■□□□ 1.71
COL13A1-204ENST00000398975 IFT140Q96RY7 1462 aa25.72■■□□□ 1.71
COL13A1-204ENST00000398975 ZNF608Q9ULD9 1512 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-204ENST00000398975 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.7
COL13A1-204ENST00000398975 TARBP1Q13395 1621 aaKnown RBP25.68■■□□□ 1.7
COL13A1-204ENST00000398975 FGD5Q6ZNL6 1462 aa25.62■■□□□ 1.69
COL13A1-204ENST00000398975 RAD54L2Q9Y4B4 1467 aa25.61■■□□□ 1.69
COL13A1-204ENST00000398975 EIF4G3O43432 1585 aaKnown RBP25.57■■□□□ 1.68
COL13A1-204ENST00000398975 SOGA1O94964 1423 aa25.54■■□□□ 1.68
COL13A1-204ENST00000398975 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.68
COL13A1-204ENST00000398975 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
COL13A1-204ENST00000398975 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
COL13A1-204ENST00000398975 TDRD9Q8NDG6 1382 aaKnown RBP25.45■■□□□ 1.67
COL13A1-204ENST00000398975 WDR97A6NE52 1622 aa25.45■■□□□ 1.67
COL13A1-204ENST00000398975 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.67
COL13A1-204ENST00000398975 TOP2BQ02880 1626 aa25.44■■□□□ 1.66
COL13A1-204ENST00000398975 ABCA10Q8WWZ4 1543 aa25.35■■□□□ 1.65
COL13A1-204ENST00000398975 OSCARQ8IYS5 282 aa25.31■■□□□ 1.64
COL13A1-204ENST00000398975 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
COL13A1-204ENST00000398975 CHD1O14646 1710 aa25.29■■□□□ 1.64
COL13A1-204ENST00000398975 SNAPC4Q5SXM2 1469 aa25.27■■□□□ 1.64
COL13A1-204ENST00000398975 GRIN2BQ13224 1484 aa25.26■■□□□ 1.63
COL13A1-204ENST00000398975 GAPVD1Q14C86 1478 aa25.26■■□□□ 1.63
COL13A1-204ENST00000398975 PBRM1Q86U86 1689 aa25.25■■□□□ 1.63
COL13A1-204ENST00000398975 MAGI1Q96QZ7 1491 aaPredicted RBP25.19■■□□□ 1.62
COL13A1-204ENST00000398975 FBLN2P98095 1184 aa25.15■■□□□ 1.62
COL13A1-204ENST00000398975 SYNJ2O15056 1496 aa25.1■■□□□ 1.61
COL13A1-204ENST00000398975 CHMP7Q8WUX9 453 aaPredicted RBP25.05■■□□□ 1.6
COL13A1-204ENST00000398975 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
COL13A1-204ENST00000398975 ERICH3Q5RHP9 1530 aa25.02■■□□□ 1.6
COL13A1-204ENST00000398975 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
COL13A1-204ENST00000398975 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
COL13A1-204ENST00000398975 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
COL13A1-204ENST00000398975 CLASP1Q7Z460 1538 aa25.01■■□□□ 1.59
COL13A1-204ENST00000398975 ARHGEF11O15085 1522 aa24.97■■□□□ 1.59
COL13A1-204ENST00000398975 GRIN2AQ12879 1464 aa24.96■■□□□ 1.59
COL13A1-204ENST00000398975 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.58
COL13A1-204ENST00000398975 KIF27Q86VH2 1401 aa24.9■■□□□ 1.58
COL13A1-204ENST00000398975 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
COL13A1-204ENST00000398975 IGF1RP08069 1367 aa24.88■■□□□ 1.57
COL13A1-204ENST00000398975 TRIM41Q8WV44 630 aa24.87■■□□□ 1.57
COL13A1-204ENST00000398975 NUP160Q12769 1436 aa24.86■■□□□ 1.57
COL13A1-204ENST00000398975 ARAP1Q96P48 1450 aa24.8■■□□□ 1.56
COL13A1-204ENST00000398975 RUSC2Q8N2Y8 1516 aa24.79■■□□□ 1.56
COL13A1-204ENST00000398975 CUL7Q14999 1698 aa24.77■■□□□ 1.56
COL13A1-204ENST00000398975 ERCC6L2Q5T890 1561 aa24.72■■□□□ 1.55
COL13A1-204ENST00000398975 CYB5RLQ6IPT4 315 aa24.71■■□□□ 1.55
COL13A1-204ENST00000398975 SHROOM2Q13796 1616 aa24.71■■□□□ 1.55
COL13A1-204ENST00000398975 CARMIL1Q5VZK9 1371 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms