RNA–Protein interactions for RNA: ENST00000398682.4

TP53TG3-201, Transcript of TP53 target 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TP53TG3, Length 2,031 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53TG3-201ENST00000398682 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
TP53TG3-201ENST00000398682 CCDC180Q9P1Z9 1646 aa21.24■□□□□ 0.99
TP53TG3-201ENST00000398682 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
TP53TG3-201ENST00000398682 SHROOM4Q9ULL8 1493 aa20.38■□□□□ 0.85
TP53TG3-201ENST00000398682 DCAF1Q9Y4B6 1507 aa20.31■□□□□ 0.84
TP53TG3-201ENST00000398682 DCAF8L2P0C7V8 631 aa20.19■□□□□ 0.82
TP53TG3-201ENST00000398682 ABCC9O60706 1549 aa20.13■□□□□ 0.81
TP53TG3-201ENST00000398682 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
TP53TG3-201ENST00000398682 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
TP53TG3-201ENST00000398682 SUPT5HO00267 1087 aaKnown RBP19.76■□□□□ 0.75
TP53TG3-201ENST00000398682 NACADO15069 1562 aa19.71■□□□□ 0.74
TP53TG3-201ENST00000398682 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
TP53TG3-201ENST00000398682 RB1CC1Q8TDY2 1594 aa19.62■□□□□ 0.73
TP53TG3-201ENST00000398682 RSF1Q96T23 1441 aaPredicted RBP19.24■□□□□ 0.67
TP53TG3-201ENST00000398682 UNC13AQ9UPW8 1703 aa19.17■□□□□ 0.66
TP53TG3-201ENST00000398682 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
TP53TG3-201ENST00000398682 CHIC1Q5VXU3 224 aa19.12■□□□□ 0.65
TP53TG3-201ENST00000398682 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
TP53TG3-201ENST00000398682 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
TP53TG3-201ENST00000398682 BAZ1AQ9NRL2 1556 aaPredicted RBP18.95■□□□□ 0.62
TP53TG3-201ENST00000398682 WIZO95785 1651 aa18.91■□□□□ 0.62
TP53TG3-201ENST00000398682 PABPN1Q86U42 306 aaKnown RBP eCLIP18.87■□□□□ 0.61
TP53TG3-201ENST00000398682 SMARCA4P51532 1647 aa18.84■□□□□ 0.61
TP53TG3-201ENST00000398682 TOP2AP11388 1531 aaKnown RBP18.7■□□□□ 0.58
TP53TG3-201ENST00000398682 EIF4G1Q04637 1599 aaKnown RBP18.58■□□□□ 0.56
TP53TG3-201ENST00000398682 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
TP53TG3-201ENST00000398682 SMARCA2P51531 1590 aa18.55■□□□□ 0.56
TP53TG3-201ENST00000398682 CCDC88BA6NC98 1476 aa18.53■□□□□ 0.56
TP53TG3-201ENST00000398682 TRIM41Q8WV44 630 aa18.52■□□□□ 0.55
TP53TG3-201ENST00000398682 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
TP53TG3-201ENST00000398682 LOC105371045A0A1W2PR82 267 aa18.41■□□□□ 0.54
TP53TG3-201ENST00000398682 BAZ1BQ9UIG0 1483 aaKnown RBP18.35■□□□□ 0.53
TP53TG3-201ENST00000398682 ABCC8Q09428 1581 aa18.28■□□□□ 0.52
TP53TG3-201ENST00000398682 CC2D2AQ9P2K1 1620 aa18.25■□□□□ 0.51
TP53TG3-201ENST00000398682 FAM9AQ8IZU1 332 aaPredicted RBP18.23■□□□□ 0.51
TP53TG3-201ENST00000398682 HMGXB3Q12766 1538 aa18.2■□□□□ 0.5
TP53TG3-201ENST00000398682 NCAPD3P42695 1498 aa18.19■□□□□ 0.5
TP53TG3-201ENST00000398682 WRNQ14191 1432 aaPredicted RBP eCLIP18.09■□□□□ 0.49
TP53TG3-201ENST00000398682 SYNJ1O43426 1573 aa18.03■□□□□ 0.48
TP53TG3-201ENST00000398682 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
TP53TG3-201ENST00000398682 SOGA1O94964 1423 aa18.01■□□□□ 0.47
TP53TG3-201ENST00000398682 EEA1Q15075 1411 aa17.99■□□□□ 0.47
TP53TG3-201ENST00000398682 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
TP53TG3-201ENST00000398682 PCGF6Q9BYE7 350 aa17.94■□□□□ 0.46
TP53TG3-201ENST00000398682 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
TP53TG3-201ENST00000398682 CFTRP13569 1480 aa17.91■□□□□ 0.46
TP53TG3-201ENST00000398682 TOP2BQ02880 1626 aa17.89■□□□□ 0.45
TP53TG3-201ENST00000398682 CSRNP3Q8WYN3 585 aa17.88■□□□□ 0.45
TP53TG3-201ENST00000398682 BIVM-ERCC5R4GMW8 1640 aa17.86■□□□□ 0.45
TP53TG3-201ENST00000398682 TRIM26Q12899 539 aaPredicted RBP17.81■□□□□ 0.44
TP53TG3-201ENST00000398682 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
TP53TG3-201ENST00000398682 TNIKQ9UKE5 1360 aa17.8■□□□□ 0.44
TP53TG3-201ENST00000398682 CUX1P39880 1505 aa17.79■□□□□ 0.44
TP53TG3-201ENST00000398682 GOLGA3Q08378 1498 aa17.79■□□□□ 0.44
TP53TG3-201ENST00000398682 KIF21BO75037 1637 aa17.76■□□□□ 0.43
TP53TG3-201ENST00000398682 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
TP53TG3-201ENST00000398682 CEP162Q5TB80 1403 aa17.76■□□□□ 0.43
TP53TG3-201ENST00000398682 CEP164Q9UPV0 1460 aa17.74■□□□□ 0.43
TP53TG3-201ENST00000398682 HRCP23327 699 aa17.73■□□□□ 0.43
TP53TG3-201ENST00000398682 UBTFP17480 764 aaKnown RBP17.67■□□□□ 0.42
TP53TG3-201ENST00000398682 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
TP53TG3-201ENST00000398682 RAPGEF2Q9Y4G8 1499 aa17.62■□□□□ 0.41
TP53TG3-201ENST00000398682 PRXQ9BXM0 1461 aa17.58■□□□□ 0.41
TP53TG3-201ENST00000398682 FANCD2Q9BXW9 1451 aa17.58■□□□□ 0.41
TP53TG3-201ENST00000398682 KIF27Q86VH2 1401 aa17.58■□□□□ 0.41
TP53TG3-201ENST00000398682 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
TP53TG3-201ENST00000398682 NESP48681 1621 aa17.55■□□□□ 0.4
TP53TG3-201ENST00000398682 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
TP53TG3-201ENST00000398682 CLIP1P30622 1438 aa17.52■□□□□ 0.4
TP53TG3-201ENST00000398682 FGD5Q6ZNL6 1462 aa17.52■□□□□ 0.4
TP53TG3-201ENST00000398682 DNMBPQ6XZF7 1577 aa17.48■□□□□ 0.39
TP53TG3-201ENST00000398682 CUX2O14529 1486 aa17.48■□□□□ 0.39
TP53TG3-201ENST00000398682 PDS5BQ9NTI5 1447 aa17.48■□□□□ 0.39
TP53TG3-201ENST00000398682 TOPBP1Q92547 1522 aa17.44■□□□□ 0.38
TP53TG3-201ENST00000398682 VPS8Q8N3P4 1428 aa17.42■□□□□ 0.38
TP53TG3-201ENST00000398682 IGF1RP08069 1367 aa17.41■□□□□ 0.38
TP53TG3-201ENST00000398682 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
TP53TG3-201ENST00000398682 POLA1P09884 1462 aaPredicted RBP17.39■□□□□ 0.37
TP53TG3-201ENST00000398682 URB2Q14146 1524 aaKnown RBP17.37■□□□□ 0.37
TP53TG3-201ENST00000398682 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
TP53TG3-201ENST00000398682 RAD54L2Q9Y4B4 1467 aa17.35■□□□□ 0.37
TP53TG3-201ENST00000398682 ERCC6Q03468 1493 aa17.33■□□□□ 0.37
TP53TG3-201ENST00000398682 ARAP1Q96P48 1450 aa17.33■□□□□ 0.37
TP53TG3-201ENST00000398682 TTBK1Q5TCY1 1321 aaPredicted RBP17.32■□□□□ 0.36
TP53TG3-201ENST00000398682 CARMIL1Q5VZK9 1371 aa17.32■□□□□ 0.36
TP53TG3-201ENST00000398682 RANGAP1P46060 587 aaPredicted RBP17.31■□□□□ 0.36
TP53TG3-201ENST00000398682 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
TP53TG3-201ENST00000398682 MRC2Q9UBG0 1479 aa17.26■□□□□ 0.35
TP53TG3-201ENST00000398682 ZEB1P37275 1124 aaPredicted RBP17.26■□□□□ 0.35
TP53TG3-201ENST00000398682 ARHGAP35Q9NRY4 1499 aa17.25■□□□□ 0.35
TP53TG3-201ENST00000398682 CUL7Q14999 1698 aa17.22■□□□□ 0.35
TP53TG3-201ENST00000398682 THOC2Q8NI27 1593 aaKnown RBP17.21■□□□□ 0.35
TP53TG3-201ENST00000398682 ABCA5Q8WWZ7 1642 aa17.2■□□□□ 0.34
TP53TG3-201ENST00000398682 APLP2Q06481 763 aa17.2■□□□□ 0.34
TP53TG3-201ENST00000398682 WDR62O43379 1518 aa17.19■□□□□ 0.34
TP53TG3-201ENST00000398682 TARBP1Q13395 1621 aaKnown RBP17.15■□□□□ 0.34
TP53TG3-201ENST00000398682 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
TP53TG3-201ENST00000398682 GAPVD1Q14C86 1478 aa17.13■□□□□ 0.33
TP53TG3-201ENST00000398682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.1■□□□□ 0.33
TP53TG3-201ENST00000398682 CTTNBP2Q8WZ74 1663 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms