RNA–Protein interactions for RNA: ENST00000398078.7

PDXK-204, Transcript of pyridoxal kinase, humanhuman

TSL 2

Gene PDXK, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXK-204ENST00000398078 NISCHQ9Y2I1 1504 aa40.73■■■■■ 4.11
PDXK-204ENST00000398078 CCDC180Q9P1Z9 1646 aa36.3■■■■□ 3.4
PDXK-204ENST00000398078 ABCC9O60706 1549 aa35.48■■■■□ 3.27
PDXK-204ENST00000398078 RB1CC1Q8TDY2 1594 aa34.2■■■■□ 3.07
PDXK-204ENST00000398078 NACADO15069 1562 aa34.17■■■■□ 3.06
PDXK-204ENST00000398078 DCAF8L2P0C7V8 631 aa33.99■■■■□ 3.03
PDXK-204ENST00000398078 MYO15BQ96JP2 1530 aa33.99■■■■□ 3.03
PDXK-204ENST00000398078 ZCCHC6Q5VYS8 1495 aaKnown RBP33.89■■■■□ 3.02
PDXK-204ENST00000398078 DCAF1Q9Y4B6 1507 aa33.78■■■■□ 3
PDXK-204ENST00000398078 UNC13AQ9UPW8 1703 aa33.38■■■□□ 2.93
PDXK-204ENST00000398078 PABPN1Q86U42 306 aaKnown RBP eCLIP33.14■■■□□ 2.91e-5■□□□□ 8.6
PDXK-204ENST00000398078 BICRAQ9NZM4 1560 aa33.11■■■□□ 2.89
PDXK-204ENST00000398078 SCRIBQ14160 1630 aa32.99■■■□□ 2.87
PDXK-204ENST00000398078 SHROOM4Q9ULL8 1493 aa32.9■■■□□ 2.86
PDXK-204ENST00000398078 DNAJC5BQ9UF47 199 aa32.65■■■□□ 2.82
PDXK-204ENST00000398078 EIF4G1Q04637 1599 aaKnown RBP32.27■■■□□ 2.76
PDXK-204ENST00000398078 CC2D2AQ9P2K1 1620 aa32.14■■■□□ 2.74
PDXK-204ENST00000398078 CECR2Q9BXF3 1484 aa31.96■■■□□ 2.71
PDXK-204ENST00000398078 SMARCA4P51532 1647 aa31.61■■■□□ 2.65
PDXK-204ENST00000398078 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
PDXK-204ENST00000398078 NCAPD3P42695 1498 aa31.52■■■□□ 2.64
PDXK-204ENST00000398078 SMARCA2P51531 1590 aa31.47■■■□□ 2.63
PDXK-204ENST00000398078 ATAD2BQ9ULI0 1458 aa31.47■■■□□ 2.63
PDXK-204ENST00000398078 PEG3Q9GZU2 1588 aa31.37■■■□□ 2.61
PDXK-204ENST00000398078 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
PDXK-204ENST00000398078 HMGXB3Q12766 1538 aa31.34■■■□□ 2.61
PDXK-204ENST00000398078 BAZ1BQ9UIG0 1483 aaKnown RBP31.21■■■□□ 2.59
PDXK-204ENST00000398078 WIZO95785 1651 aa30.99■■■□□ 2.55
PDXK-204ENST00000398078 RSF1Q96T23 1441 aaPredicted RBP30.98■■■□□ 2.55
PDXK-204ENST00000398078 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
PDXK-204ENST00000398078 LAMC3Q9Y6N6 1575 aa30.7■■■□□ 2.5
PDXK-204ENST00000398078 NESP48681 1621 aa30.67■■■□□ 2.5
PDXK-204ENST00000398078 ERCC6Q03468 1493 aa30.65■■■□□ 2.5
PDXK-204ENST00000398078 CADPSQ9ULU8 1353 aa30.57■■■□□ 2.48
PDXK-204ENST00000398078 PDS5BQ9NTI5 1447 aa30.5■■■□□ 2.47
PDXK-204ENST00000398078 CUX2O14529 1486 aa30.42■■■□□ 2.46
PDXK-204ENST00000398078 CFTRP13569 1480 aa30.38■■■□□ 2.45
PDXK-204ENST00000398078 KIF21AQ7Z4S6 1674 aa30.34■■■□□ 2.45
PDXK-204ENST00000398078 CCDC88BA6NC98 1476 aa30.32■■■□□ 2.44
PDXK-204ENST00000398078 THOC2Q8NI27 1593 aaKnown RBP30.27■■■□□ 2.44
PDXK-204ENST00000398078 FANCD2Q9BXW9 1451 aa30.19■■■□□ 2.42
PDXK-204ENST00000398078 CEP164Q9UPV0 1460 aa30.17■■■□□ 2.42
PDXK-204ENST00000398078 MRC2Q9UBG0 1479 aa30.15■■■□□ 2.42
PDXK-204ENST00000398078 PRDM2Q13029 1718 aa30.15■■■□□ 2.42
PDXK-204ENST00000398078 WDR62O43379 1518 aa30.06■■■□□ 2.4
PDXK-204ENST00000398078 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
PDXK-204ENST00000398078 URB2Q14146 1524 aaKnown RBP29.86■■■□□ 2.37
PDXK-204ENST00000398078 ABCC8Q09428 1581 aa29.79■■■□□ 2.36
PDXK-204ENST00000398078 TOPBP1Q92547 1522 aa29.69■■■□□ 2.34
PDXK-204ENST00000398078 DNMBPQ6XZF7 1577 aa29.67■■■□□ 2.34
PDXK-204ENST00000398078 DNAJC5Q9H3Z4 198 aa29.58■■■□□ 2.33
PDXK-204ENST00000398078 IFT140Q96RY7 1462 aa29.57■■■□□ 2.32
PDXK-204ENST00000398078 POLA1P09884 1462 aaPredicted RBP29.43■■■□□ 2.3
PDXK-204ENST00000398078 CUX1P39880 1505 aa29.41■■■□□ 2.3
PDXK-204ENST00000398078 TARBP1Q13395 1621 aaKnown RBP29.38■■■□□ 2.29
PDXK-204ENST00000398078 ZNF608Q9ULD9 1512 aaPredicted RBP29.36■■■□□ 2.29
PDXK-204ENST00000398078 SOGA1O94964 1423 aa29.33■■■□□ 2.29
PDXK-204ENST00000398078 FGD5Q6ZNL6 1462 aa29.33■■■□□ 2.29
PDXK-204ENST00000398078 EIF4G3O43432 1585 aaKnown RBP29.26■■■□□ 2.28
PDXK-204ENST00000398078 RAD54L2Q9Y4B4 1467 aa29.26■■■□□ 2.27
PDXK-204ENST00000398078 WDR97A6NE52 1622 aa29.25■■■□□ 2.27
PDXK-204ENST00000398078 WRNQ14191 1432 aaPredicted RBP eCLIP29.22■■■□□ 2.27
PDXK-204ENST00000398078 AQRO60306 1485 aaKnown RBP eCLIP29.19■■■□□ 2.267e-7■■■■□ 22.4
PDXK-204ENST00000398078 TOP2BQ02880 1626 aa29.18■■■□□ 2.26
PDXK-204ENST00000398078 BIVM-ERCC5R4GMW8 1640 aa29.17■■■□□ 2.26
PDXK-204ENST00000398078 OSCARQ8IYS5 282 aa29.14■■■□□ 2.26
PDXK-204ENST00000398078 TDRD9Q8NDG6 1382 aaKnown RBP29.13■■■□□ 2.25
PDXK-204ENST00000398078 SYNJ1O43426 1573 aa29.1■■■□□ 2.25
PDXK-204ENST00000398078 ABCA10Q8WWZ4 1543 aa29.09■■■□□ 2.25
PDXK-204ENST00000398078 GRIN2BQ13224 1484 aa29.02■■■□□ 2.24
PDXK-204ENST00000398078 GAPVD1Q14C86 1478 aa28.99■■■□□ 2.23
PDXK-204ENST00000398078 MAGI1Q96QZ7 1491 aaPredicted RBP28.97■■■□□ 2.23
PDXK-204ENST00000398078 ABCA5Q8WWZ7 1642 aa28.96■■■□□ 2.23
PDXK-204ENST00000398078 SNAPC4Q5SXM2 1469 aa28.93■■■□□ 2.22
PDXK-204ENST00000398078 PBRM1Q86U86 1689 aa28.92■■■□□ 2.22
PDXK-204ENST00000398078 CHD1O14646 1710 aa28.91■■■□□ 2.22
PDXK-204ENST00000398078 FBLN2P98095 1184 aa28.87■■■□□ 2.21
PDXK-204ENST00000398078 SYNJ2O15056 1496 aa28.85■■■□□ 2.21
PDXK-204ENST00000398078 CHMP7Q8WUX9 453 aaPredicted RBP28.83■■■□□ 2.21
PDXK-204ENST00000398078 ERICH3Q5RHP9 1530 aa28.76■■■□□ 2.19
PDXK-204ENST00000398078 FHAD1B1AJZ9 1412 aa28.68■■■□□ 2.18
PDXK-204ENST00000398078 ADAMTS12P58397 1594 aa28.67■■■□□ 2.18
PDXK-204ENST00000398078 KIF27Q86VH2 1401 aa28.65■■■□□ 2.18
PDXK-204ENST00000398078 CLASP1Q7Z460 1538 aa28.63■■■□□ 2.17
PDXK-204ENST00000398078 GRIN2AQ12879 1464 aa28.62■■■□□ 2.17
PDXK-204ENST00000398078 ARHGEF11O15085 1522 aa28.61■■■□□ 2.17
PDXK-204ENST00000398078 RIMBP3CA6NJZ7 1639 aa28.61■■■□□ 2.17
PDXK-204ENST00000398078 RIMBP3BA6NNM3 1639 aa28.61■■■□□ 2.17
PDXK-204ENST00000398078 RIMBP3Q9UFD9 1639 aa28.61■■■□□ 2.17
PDXK-204ENST00000398078 IGF1RP08069 1367 aa28.52■■■□□ 2.16
PDXK-204ENST00000398078 NUP160Q12769 1436 aa28.51■■■□□ 2.15
PDXK-204ENST00000398078 CUL7Q14999 1698 aa28.48■■■□□ 2.15
PDXK-204ENST00000398078 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
PDXK-204ENST00000398078 CEP170Q5SW79 1584 aa28.45■■■□□ 2.14
PDXK-204ENST00000398078 ARAP1Q96P48 1450 aa28.35■■■□□ 2.13
PDXK-204ENST00000398078 CYB5RLQ6IPT4 315 aa28.35■■■□□ 2.13
PDXK-204ENST00000398078 CARMIL1Q5VZK9 1371 aa28.35■■■□□ 2.13
PDXK-204ENST00000398078 SHROOM2Q13796 1616 aa28.31■■■□□ 2.12
PDXK-204ENST00000398078 RUSC2Q8N2Y8 1516 aa28.25■■■□□ 2.11
PDXK-204ENST00000398078 KIAA0586Q9BVV6 1533 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms