RNA–Protein interactions for RNA: ENST00000397820.4

C19orf38-201, Transcript of chromosome 19 open reading frame 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C19orf38, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf38-201ENST00000397820 NISCHQ9Y2I1 1504 aa29.61■■■□□ 2.33
C19orf38-201ENST00000397820 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
C19orf38-201ENST00000397820 ABCC9O60706 1549 aa26.09■■□□□ 1.77
C19orf38-201ENST00000397820 RB1CC1Q8TDY2 1594 aa25.06■■□□□ 1.6
C19orf38-201ENST00000397820 NACADO15069 1562 aa24.96■■□□□ 1.59
C19orf38-201ENST00000397820 MYO15BQ96JP2 1530 aa24.74■■□□□ 1.55
C19orf38-201ENST00000397820 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
C19orf38-201ENST00000397820 UNC13AQ9UPW8 1703 aa24.64■■□□□ 1.54
C19orf38-201ENST00000397820 ZCCHC6Q5VYS8 1495 aaKnown RBP24.62■■□□□ 1.53
C19orf38-201ENST00000397820 DCAF1Q9Y4B6 1507 aa24.53■■□□□ 1.52
C19orf38-201ENST00000397820 BICRAQ9NZM4 1560 aa24.34■■□□□ 1.49
C19orf38-201ENST00000397820 PABPN1Q86U42 306 aaKnown RBP eCLIP24.25■■□□□ 1.47
C19orf38-201ENST00000397820 DNAJC5BQ9UF47 199 aa24.16■■□□□ 1.46
C19orf38-201ENST00000397820 SCRIBQ14160 1630 aa24.12■■□□□ 1.45
C19orf38-201ENST00000397820 SHROOM4Q9ULL8 1493 aa24.06■■□□□ 1.44
C19orf38-201ENST00000397820 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
C19orf38-201ENST00000397820 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
C19orf38-201ENST00000397820 CECR2Q9BXF3 1484 aa23.49■■□□□ 1.35
C19orf38-201ENST00000397820 SMARCA4P51532 1647 aa23.08■■□□□ 1.29
C19orf38-201ENST00000397820 NCAPD3P42695 1498 aa22.99■■□□□ 1.27
C19orf38-201ENST00000397820 BAZ1AQ9NRL2 1556 aaPredicted RBP22.98■■□□□ 1.27
C19orf38-201ENST00000397820 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
C19orf38-201ENST00000397820 SMARCA2P51531 1590 aa22.95■■□□□ 1.26
C19orf38-201ENST00000397820 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
C19orf38-201ENST00000397820 PEG3Q9GZU2 1588 aa22.89■■□□□ 1.25
C19orf38-201ENST00000397820 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
C19orf38-201ENST00000397820 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
C19orf38-201ENST00000397820 WIZO95785 1651 aa22.6■■□□□ 1.21
C19orf38-201ENST00000397820 NESP48681 1621 aa22.52■■□□□ 1.2
C19orf38-201ENST00000397820 ERCC6Q03468 1493 aa22.5■■□□□ 1.19
C19orf38-201ENST00000397820 LAMC3Q9Y6N6 1575 aa22.49■■□□□ 1.19
C19orf38-201ENST00000397820 CUX2O14529 1486 aa22.42■■□□□ 1.18
C19orf38-201ENST00000397820 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
C19orf38-201ENST00000397820 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
C19orf38-201ENST00000397820 THOC2Q8NI27 1593 aaKnown RBP22.33■■□□□ 1.17
C19orf38-201ENST00000397820 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
C19orf38-201ENST00000397820 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
C19orf38-201ENST00000397820 PDS5BQ9NTI5 1447 aa22.25■■□□□ 1.15
C19orf38-201ENST00000397820 PRDM2Q13029 1718 aa22.13■■□□□ 1.13
C19orf38-201ENST00000397820 CFTRP13569 1480 aa22.12■■□□□ 1.13
C19orf38-201ENST00000397820 MRC2Q9UBG0 1479 aa22.08■■□□□ 1.12
C19orf38-201ENST00000397820 WDR62O43379 1518 aa22.06■■□□□ 1.12
C19orf38-201ENST00000397820 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
C19orf38-201ENST00000397820 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
C19orf38-201ENST00000397820 CCDC88BA6NC98 1476 aa22.01■■□□□ 1.11
C19orf38-201ENST00000397820 DNAJC5Q9H3Z4 198 aa21.98■■□□□ 1.11
C19orf38-201ENST00000397820 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
C19orf38-201ENST00000397820 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
C19orf38-201ENST00000397820 DNMBPQ6XZF7 1577 aa21.66■■□□□ 1.06
C19orf38-201ENST00000397820 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
C19orf38-201ENST00000397820 IFT140Q96RY7 1462 aa21.59■■□□□ 1.05
C19orf38-201ENST00000397820 TARBP1Q13395 1621 aaKnown RBP21.53■■□□□ 1.04
C19orf38-201ENST00000397820 ZNF608Q9ULD9 1512 aaPredicted RBP21.52■■□□□ 1.04
C19orf38-201ENST00000397820 SUPT5HO00267 1087 aaKnown RBP21.51■■□□□ 1.03
C19orf38-201ENST00000397820 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
C19orf38-201ENST00000397820 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
C19orf38-201ENST00000397820 CUX1P39880 1505 aa21.42■■□□□ 1.02
C19orf38-201ENST00000397820 FGD5Q6ZNL6 1462 aa21.38■■□□□ 1.01
C19orf38-201ENST00000397820 WDR97A6NE52 1622 aa21.36■■□□□ 1.01
C19orf38-201ENST00000397820 RAD54L2Q9Y4B4 1467 aa21.34■■□□□ 1.01
C19orf38-201ENST00000397820 CHD1O14646 1710 aa21.33■■□□□ 1.01
C19orf38-201ENST00000397820 OSCARQ8IYS5 282 aa21.33■■□□□ 1.01
C19orf38-201ENST00000397820 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 1
C19orf38-201ENST00000397820 SOGA1O94964 1423 aa21.32■■□□□ 1
C19orf38-201ENST00000397820 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
C19orf38-201ENST00000397820 PBRM1Q86U86 1689 aa21.22■□□□□ 0.99
C19orf38-201ENST00000397820 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
C19orf38-201ENST00000397820 TOP2BQ02880 1626 aa21.2■□□□□ 0.98
C19orf38-201ENST00000397820 ABCA5Q8WWZ7 1642 aa21.18■□□□□ 0.98
C19orf38-201ENST00000397820 ABCA10Q8WWZ4 1543 aa21.17■□□□□ 0.98
C19orf38-201ENST00000397820 SYNJ1O43426 1573 aa21.17■□□□□ 0.98
C19orf38-201ENST00000397820 RIMBP3CA6NJZ7 1639 aa21.17■□□□□ 0.98
C19orf38-201ENST00000397820 RIMBP3BA6NNM3 1639 aa21.17■□□□□ 0.98
C19orf38-201ENST00000397820 RIMBP3Q9UFD9 1639 aa21.17■□□□□ 0.98
C19orf38-201ENST00000397820 SNAPC4Q5SXM2 1469 aa21.15■□□□□ 0.98
C19orf38-201ENST00000397820 GRIN2BQ13224 1484 aa21.14■□□□□ 0.98
C19orf38-201ENST00000397820 MAGI1Q96QZ7 1491 aaPredicted RBP21.14■□□□□ 0.98
C19orf38-201ENST00000397820 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.97
C19orf38-201ENST00000397820 GAPVD1Q14C86 1478 aa21.1■□□□□ 0.97
C19orf38-201ENST00000397820 ARHGEF11O15085 1522 aa21.09■□□□□ 0.97
C19orf38-201ENST00000397820 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
C19orf38-201ENST00000397820 SYNJ2O15056 1496 aa21.05■□□□□ 0.96
C19orf38-201ENST00000397820 FBLN2P98095 1184 aa21.04■□□□□ 0.96
C19orf38-201ENST00000397820 CLASP1Q7Z460 1538 aa21.04■□□□□ 0.96
C19orf38-201ENST00000397820 ADAMTS12P58397 1594 aa20.97■□□□□ 0.95
C19orf38-201ENST00000397820 CHMP7Q8WUX9 453 aaPredicted RBP20.96■□□□□ 0.95
C19orf38-201ENST00000397820 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
C19orf38-201ENST00000397820 GRIN2AQ12879 1464 aa20.89■□□□□ 0.94
C19orf38-201ENST00000397820 ARAP1Q96P48 1450 aa20.89■□□□□ 0.94
C19orf38-201ENST00000397820 FHAD1B1AJZ9 1412 aa20.84■□□□□ 0.93
C19orf38-201ENST00000397820 CEP170Q5SW79 1584 aa20.84■□□□□ 0.93
C19orf38-201ENST00000397820 NUP160Q12769 1436 aa20.8■□□□□ 0.92
C19orf38-201ENST00000397820 CYB5RLQ6IPT4 315 aa20.79■□□□□ 0.92
C19orf38-201ENST00000397820 SHROOM2Q13796 1616 aa20.77■□□□□ 0.92
C19orf38-201ENST00000397820 CUL7Q14999 1698 aa20.73■□□□□ 0.91
C19orf38-201ENST00000397820 ERCC6L2Q5T890 1561 aa20.7■□□□□ 0.9
C19orf38-201ENST00000397820 KIF27Q86VH2 1401 aa20.7■□□□□ 0.9
C19orf38-201ENST00000397820 RUSC2Q8N2Y8 1516 aa20.68■□□□□ 0.9
C19orf38-201ENST00000397820 IGF1RP08069 1367 aa20.64■□□□□ 0.89
C19orf38-201ENST00000397820 KIAA0586Q9BVV6 1533 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms