RNA–Protein interactions for RNA: ENST00000397772.2

TPM3P2-201, Transcript of tropomyosin 3 pseudogene 2, humanhuman

BASIC

Gene TPM3P2, Length 723 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P2-201ENST00000397772 AEBP2Q6ZN18 517 aaPredicted RBP24.96■■□□□ 1.59
TPM3P2-201ENST00000397772 NISCHQ9Y2I1 1504 aa23.75■■□□□ 1.39
TPM3P2-201ENST00000397772 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
TPM3P2-201ENST00000397772 ABCC9O60706 1549 aa21.76■■□□□ 1.07
TPM3P2-201ENST00000397772 CCDC180Q9P1Z9 1646 aa21.38■■□□□ 1.01
TPM3P2-201ENST00000397772 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
TPM3P2-201ENST00000397772 PHF23Q9BUL5 403 aaPredicted RBP20.94■□□□□ 0.94
TPM3P2-201ENST00000397772 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
TPM3P2-201ENST00000397772 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
TPM3P2-201ENST00000397772 NACADO15069 1562 aa20.31■□□□□ 0.84
TPM3P2-201ENST00000397772 PABPN1Q86U42 306 aaKnown RBP eCLIP20.25■□□□□ 0.83
TPM3P2-201ENST00000397772 DCAF8L2P0C7V8 631 aa20.18■□□□□ 0.82
TPM3P2-201ENST00000397772 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.81
TPM3P2-201ENST00000397772 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
TPM3P2-201ENST00000397772 MYO15BQ96JP2 1530 aa19.94■□□□□ 0.78
TPM3P2-201ENST00000397772 FOXD1Q16676 465 aa19.86■□□□□ 0.77
TPM3P2-201ENST00000397772 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
TPM3P2-201ENST00000397772 CECR2Q9BXF3 1484 aa19.62■□□□□ 0.73
TPM3P2-201ENST00000397772 ZCCHC6Q5VYS8 1495 aaKnown RBP19.61■□□□□ 0.73
TPM3P2-201ENST00000397772 SHROOM4Q9ULL8 1493 aa19.61■□□□□ 0.73
TPM3P2-201ENST00000397772 DCAF1Q9Y4B6 1507 aa19.58■□□□□ 0.73
TPM3P2-201ENST00000397772 SCRIBQ14160 1630 aa19.51■□□□□ 0.71
TPM3P2-201ENST00000397772 EIF4G1Q04637 1599 aaKnown RBP19.5■□□□□ 0.71
TPM3P2-201ENST00000397772 DNAJC5Q9H3Z4 198 aa19.26■□□□□ 0.67
TPM3P2-201ENST00000397772 CUX2O14529 1486 aa18.84■□□□□ 0.61
TPM3P2-201ENST00000397772 NCAPD3P42695 1498 aa18.8■□□□□ 0.6
TPM3P2-201ENST00000397772 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
TPM3P2-201ENST00000397772 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
TPM3P2-201ENST00000397772 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
TPM3P2-201ENST00000397772 NESP48681 1621 aa18.63■□□□□ 0.57
TPM3P2-201ENST00000397772 MSH5O43196 834 aa18.62■□□□□ 0.57
TPM3P2-201ENST00000397772 HMGXB3Q12766 1538 aa18.59■□□□□ 0.57
TPM3P2-201ENST00000397772 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
TPM3P2-201ENST00000397772 SMARCA2P51531 1590 aa18.57■□□□□ 0.56
TPM3P2-201ENST00000397772 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
TPM3P2-201ENST00000397772 PIAS4Q8N2W9 510 aaPredicted RBP18.48■□□□□ 0.55
TPM3P2-201ENST00000397772 THOC2Q8NI27 1593 aaKnown RBP18.47■□□□□ 0.55
TPM3P2-201ENST00000397772 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.55
TPM3P2-201ENST00000397772 PPP6R1Q9UPN7 881 aa18.44■□□□□ 0.54
TPM3P2-201ENST00000397772 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
TPM3P2-201ENST00000397772 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
TPM3P2-201ENST00000397772 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
TPM3P2-201ENST00000397772 ADRA2BP18089 450 aa18.35■□□□□ 0.53
TPM3P2-201ENST00000397772 MROH2BQ7Z745 1585 aa18.33■□□□□ 0.52
TPM3P2-201ENST00000397772 KIF21AQ7Z4S6 1674 aa18.32■□□□□ 0.52
TPM3P2-201ENST00000397772 PDS5BQ9NTI5 1447 aa18.29■□□□□ 0.52
TPM3P2-201ENST00000397772 TRIM41Q8WV44 630 aa18.25■□□□□ 0.51
TPM3P2-201ENST00000397772 CADPSQ9ULU8 1353 aa18.21■□□□□ 0.51
TPM3P2-201ENST00000397772 MRC2Q9UBG0 1479 aa18.16■□□□□ 0.5
TPM3P2-201ENST00000397772 WDR62O43379 1518 aa18.13■□□□□ 0.49
TPM3P2-201ENST00000397772 WIZO95785 1651 aa18.06■□□□□ 0.48
TPM3P2-201ENST00000397772 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
TPM3P2-201ENST00000397772 FANCD2Q9BXW9 1451 aa17.99■□□□□ 0.47
TPM3P2-201ENST00000397772 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
TPM3P2-201ENST00000397772 CFTRP13569 1480 aa17.94■□□□□ 0.46
TPM3P2-201ENST00000397772 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
TPM3P2-201ENST00000397772 RSF1Q96T23 1441 aaPredicted RBP17.83■□□□□ 0.45
TPM3P2-201ENST00000397772 TOP2AP11388 1531 aaKnown RBP17.79■□□□□ 0.44
TPM3P2-201ENST00000397772 RIMBP3CA6NJZ7 1639 aa17.76■□□□□ 0.43
TPM3P2-201ENST00000397772 RIMBP3BA6NNM3 1639 aa17.76■□□□□ 0.43
TPM3P2-201ENST00000397772 RIMBP3Q9UFD9 1639 aa17.76■□□□□ 0.43
TPM3P2-201ENST00000397772 ZNF608Q9ULD9 1512 aaPredicted RBP17.74■□□□□ 0.43
TPM3P2-201ENST00000397772 IFT140Q96RY7 1462 aa17.68■□□□□ 0.42
TPM3P2-201ENST00000397772 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
TPM3P2-201ENST00000397772 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
TPM3P2-201ENST00000397772 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
TPM3P2-201ENST00000397772 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
TPM3P2-201ENST00000397772 CYB5RLQ6IPT4 315 aa17.58■□□□□ 0.4
TPM3P2-201ENST00000397772 EIF4G3O43432 1585 aaKnown RBP17.56■□□□□ 0.4
TPM3P2-201ENST00000397772 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.4
TPM3P2-201ENST00000397772 ABCC8Q09428 1581 aa17.51■□□□□ 0.39
TPM3P2-201ENST00000397772 DNMBPQ6XZF7 1577 aa17.5■□□□□ 0.39
TPM3P2-201ENST00000397772 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
TPM3P2-201ENST00000397772 ARAP1Q96P48 1450 aa17.5■□□□□ 0.39
TPM3P2-201ENST00000397772 CHD1O14646 1710 aa17.48■□□□□ 0.39
TPM3P2-201ENST00000397772 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
TPM3P2-201ENST00000397772 FBLN2P98095 1184 aa17.43■□□□□ 0.38
TPM3P2-201ENST00000397772 POLA1P09884 1462 aaPredicted RBP17.43■□□□□ 0.38
TPM3P2-201ENST00000397772 RAD54L2Q9Y4B4 1467 aa17.4■□□□□ 0.38
TPM3P2-201ENST00000397772 TDRD9Q8NDG6 1382 aaKnown RBP17.38■□□□□ 0.37
TPM3P2-201ENST00000397772 SOGA1O94964 1423 aa17.34■□□□□ 0.37
TPM3P2-201ENST00000397772 CLASP1Q7Z460 1538 aa17.31■□□□□ 0.36
TPM3P2-201ENST00000397772 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
TPM3P2-201ENST00000397772 FGD5Q6ZNL6 1462 aa17.26■□□□□ 0.35
TPM3P2-201ENST00000397772 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
TPM3P2-201ENST00000397772 MAGI1Q96QZ7 1491 aaPredicted RBP17.23■□□□□ 0.35
TPM3P2-201ENST00000397772 CUX1P39880 1505 aa17.22■□□□□ 0.35
TPM3P2-201ENST00000397772 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
TPM3P2-201ENST00000397772 SYNJ1O43426 1573 aa17.22■□□□□ 0.35
TPM3P2-201ENST00000397772 GRIN2BQ13224 1484 aa17.2■□□□□ 0.34
TPM3P2-201ENST00000397772 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
TPM3P2-201ENST00000397772 GAPVD1Q14C86 1478 aa17.14■□□□□ 0.33
TPM3P2-201ENST00000397772 PBRM1Q86U86 1689 aa17.08■□□□□ 0.32
TPM3P2-201ENST00000397772 ERCC6L2Q5T890 1561 aa17.06■□□□□ 0.32
TPM3P2-201ENST00000397772 ABCA10Q8WWZ4 1543 aa17.05■□□□□ 0.32
TPM3P2-201ENST00000397772 ABCA5Q8WWZ7 1642 aa17.04■□□□□ 0.32
TPM3P2-201ENST00000397772 SUPT5HO00267 1087 aaKnown RBP17.03■□□□□ 0.32
TPM3P2-201ENST00000397772 GRIN2AQ12879 1464 aa16.99■□□□□ 0.31
TPM3P2-201ENST00000397772 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
TPM3P2-201ENST00000397772 NUP160Q12769 1436 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms