RNA–Protein interactions for RNA: ENST00000397671.1

CPSF4L-202, Transcript of cleavage and polyadenylation specific factor 4 like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CPSF4L, Length 1,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4L-202ENST00000397671 NISCHQ9Y2I1 1504 aa32.48■■■□□ 2.79
CPSF4L-202ENST00000397671 CCDC180Q9P1Z9 1646 aa29.04■■■□□ 2.24
CPSF4L-202ENST00000397671 ABCC9O60706 1549 aa28.47■■■□□ 2.15
CPSF4L-202ENST00000397671 RB1CC1Q8TDY2 1594 aa27.32■■□□□ 1.96
CPSF4L-202ENST00000397671 NACADO15069 1562 aa27.24■■□□□ 1.95
CPSF4L-202ENST00000397671 ZCCHC6Q5VYS8 1495 aaKnown RBP27.08■■□□□ 1.93
CPSF4L-202ENST00000397671 MYO15BQ96JP2 1530 aa27.04■■□□□ 1.92
CPSF4L-202ENST00000397671 DCAF8L2P0C7V8 631 aa26.94■■□□□ 1.9
CPSF4L-202ENST00000397671 DCAF1Q9Y4B6 1507 aa26.88■■□□□ 1.89
CPSF4L-202ENST00000397671 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
CPSF4L-202ENST00000397671 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
CPSF4L-202ENST00000397671 PABPN1Q86U42 306 aaKnown RBP eCLIP26.47■■□□□ 1.83
CPSF4L-202ENST00000397671 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
CPSF4L-202ENST00000397671 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
CPSF4L-202ENST00000397671 DNAJC5BQ9UF47 199 aa26.22■■□□□ 1.79
CPSF4L-202ENST00000397671 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
CPSF4L-202ENST00000397671 CC2D2AQ9P2K1 1620 aa25.79■■□□□ 1.72
CPSF4L-202ENST00000397671 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.69
CPSF4L-202ENST00000397671 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
CPSF4L-202ENST00000397671 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
CPSF4L-202ENST00000397671 ATAD2BQ9ULI0 1458 aa25.13■■□□□ 1.61
CPSF4L-202ENST00000397671 NCAPD3P42695 1498 aa25.11■■□□□ 1.61
CPSF4L-202ENST00000397671 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
CPSF4L-202ENST00000397671 MROH2BQ7Z745 1585 aa25.06■■□□□ 1.6
CPSF4L-202ENST00000397671 HMGXB3Q12766 1538 aa25.06■■□□□ 1.6
CPSF4L-202ENST00000397671 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
CPSF4L-202ENST00000397671 BAZ1BQ9UIG0 1483 aaKnown RBP24.9■■□□□ 1.58
CPSF4L-202ENST00000397671 WIZO95785 1651 aa24.81■■□□□ 1.56
CPSF4L-202ENST00000397671 RSF1Q96T23 1441 aaPredicted RBP24.66■■□□□ 1.54
CPSF4L-202ENST00000397671 NESP48681 1621 aa24.63■■□□□ 1.53
CPSF4L-202ENST00000397671 TOP2AP11388 1531 aaKnown RBP24.52■■□□□ 1.52
CPSF4L-202ENST00000397671 LAMC3Q9Y6N6 1575 aa24.52■■□□□ 1.52
CPSF4L-202ENST00000397671 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
CPSF4L-202ENST00000397671 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
CPSF4L-202ENST00000397671 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
CPSF4L-202ENST00000397671 CUX2O14529 1486 aa24.34■■□□□ 1.49
CPSF4L-202ENST00000397671 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
CPSF4L-202ENST00000397671 PDS5BQ9NTI5 1447 aa24.26■■□□□ 1.47
CPSF4L-202ENST00000397671 CFTRP13569 1480 aa24.21■■□□□ 1.47
CPSF4L-202ENST00000397671 CCDC88BA6NC98 1476 aa24.16■■□□□ 1.46
CPSF4L-202ENST00000397671 PRDM2Q13029 1718 aa24.15■■□□□ 1.46
CPSF4L-202ENST00000397671 MRC2Q9UBG0 1479 aa24.12■■□□□ 1.45
CPSF4L-202ENST00000397671 FANCD2Q9BXW9 1451 aa24.11■■□□□ 1.45
CPSF4L-202ENST00000397671 CEP164Q9UPV0 1460 aa24.11■■□□□ 1.45
CPSF4L-202ENST00000397671 WDR62O43379 1518 aa24.1■■□□□ 1.45
CPSF4L-202ENST00000397671 URB2Q14146 1524 aaKnown RBP23.94■■□□□ 1.42
CPSF4L-202ENST00000397671 SUPT5HO00267 1087 aaKnown RBP23.76■■□□□ 1.39
CPSF4L-202ENST00000397671 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
CPSF4L-202ENST00000397671 DNMBPQ6XZF7 1577 aa23.72■■□□□ 1.39
CPSF4L-202ENST00000397671 DNAJC5Q9H3Z4 198 aa23.66■■□□□ 1.38
CPSF4L-202ENST00000397671 ABCC8Q09428 1581 aa23.62■■□□□ 1.37
CPSF4L-202ENST00000397671 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
CPSF4L-202ENST00000397671 ZNF608Q9ULD9 1512 aaPredicted RBP23.55■■□□□ 1.36
CPSF4L-202ENST00000397671 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
CPSF4L-202ENST00000397671 CUX1P39880 1505 aa23.54■■□□□ 1.36
CPSF4L-202ENST00000397671 POLA1P09884 1462 aaPredicted RBP23.53■■□□□ 1.36
CPSF4L-202ENST00000397671 EIF4G3O43432 1585 aaKnown RBP23.52■■□□□ 1.36
CPSF4L-202ENST00000397671 FGD5Q6ZNL6 1462 aa23.44■■□□□ 1.34
CPSF4L-202ENST00000397671 RAD54L2Q9Y4B4 1467 aa23.41■■□□□ 1.34
CPSF4L-202ENST00000397671 WDR97A6NE52 1622 aa23.39■■□□□ 1.33
CPSF4L-202ENST00000397671 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.32
CPSF4L-202ENST00000397671 BIVM-ERCC5R4GMW8 1640 aa23.32■■□□□ 1.32
CPSF4L-202ENST00000397671 SOGA1O94964 1423 aa23.32■■□□□ 1.32
CPSF4L-202ENST00000397671 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
CPSF4L-202ENST00000397671 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
CPSF4L-202ENST00000397671 CHD1O14646 1710 aa23.25■■□□□ 1.31
CPSF4L-202ENST00000397671 WRNQ14191 1432 aaPredicted RBP eCLIP23.24■■□□□ 1.31
CPSF4L-202ENST00000397671 TDRD9Q8NDG6 1382 aaKnown RBP23.23■■□□□ 1.31
CPSF4L-202ENST00000397671 ABCA5Q8WWZ7 1642 aa23.21■■□□□ 1.31
CPSF4L-202ENST00000397671 PBRM1Q86U86 1689 aa23.2■■□□□ 1.3
CPSF4L-202ENST00000397671 ABCA10Q8WWZ4 1543 aa23.2■■□□□ 1.3
CPSF4L-202ENST00000397671 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
CPSF4L-202ENST00000397671 GRIN2BQ13224 1484 aa23.12■■□□□ 1.29
CPSF4L-202ENST00000397671 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
CPSF4L-202ENST00000397671 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
CPSF4L-202ENST00000397671 GAPVD1Q14C86 1478 aa23.1■■□□□ 1.29
CPSF4L-202ENST00000397671 RIMBP3CA6NJZ7 1639 aa23.01■■□□□ 1.27
CPSF4L-202ENST00000397671 RIMBP3BA6NNM3 1639 aa23.01■■□□□ 1.27
CPSF4L-202ENST00000397671 RIMBP3Q9UFD9 1639 aa23.01■■□□□ 1.27
CPSF4L-202ENST00000397671 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
CPSF4L-202ENST00000397671 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
CPSF4L-202ENST00000397671 CLASP1Q7Z460 1538 aa22.98■■□□□ 1.27
CPSF4L-202ENST00000397671 ARHGEF11O15085 1522 aa22.97■■□□□ 1.27
CPSF4L-202ENST00000397671 FBLN2P98095 1184 aa22.94■■□□□ 1.26
CPSF4L-202ENST00000397671 ERICH3Q5RHP9 1530 aa22.91■■□□□ 1.26
CPSF4L-202ENST00000397671 GRIN2AQ12879 1464 aa22.86■■□□□ 1.25
CPSF4L-202ENST00000397671 CHMP7Q8WUX9 453 aaPredicted RBP22.85■■□□□ 1.25
CPSF4L-202ENST00000397671 CEP170Q5SW79 1584 aa22.82■■□□□ 1.24
CPSF4L-202ENST00000397671 FHAD1B1AJZ9 1412 aa22.82■■□□□ 1.24
CPSF4L-202ENST00000397671 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
CPSF4L-202ENST00000397671 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
CPSF4L-202ENST00000397671 NUP160Q12769 1436 aa22.78■■□□□ 1.24
CPSF4L-202ENST00000397671 KIF27Q86VH2 1401 aa22.72■■□□□ 1.23
CPSF4L-202ENST00000397671 CUL7Q14999 1698 aa22.71■■□□□ 1.23
CPSF4L-202ENST00000397671 SHROOM2Q13796 1616 aa22.69■■□□□ 1.22
CPSF4L-202ENST00000397671 RUSC2Q8N2Y8 1516 aa22.68■■□□□ 1.22
CPSF4L-202ENST00000397671 ERCC6L2Q5T890 1561 aa22.66■■□□□ 1.22
CPSF4L-202ENST00000397671 IGF1RP08069 1367 aa22.64■■□□□ 1.22
CPSF4L-202ENST00000397671 CYB5RLQ6IPT4 315 aa22.57■■□□□ 1.2
CPSF4L-202ENST00000397671 AEBP2Q6ZN18 517 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms