RNA–Protein interactions for RNA: ENST00000397591.2

THBS1-202, Transcript of thrombospondin 1, humanhuman

TSL 2

Gene THBS1, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1-202ENST00000397591 NISCHQ9Y2I1 1504 aa41.23■■■■■ 4.19
THBS1-202ENST00000397591 CCDC180Q9P1Z9 1646 aa36.68■■■■□ 3.46
THBS1-202ENST00000397591 ABCC9O60706 1549 aa35.83■■■■□ 3.33
THBS1-202ENST00000397591 DCAF8L2P0C7V8 631 aa34.57■■■■□ 3.12
THBS1-202ENST00000397591 RB1CC1Q8TDY2 1594 aa34.47■■■■□ 3.11
THBS1-202ENST00000397591 NACADO15069 1562 aa34.41■■■■□ 3.1
THBS1-202ENST00000397591 ZCCHC6Q5VYS8 1495 aaKnown RBP34.33■■■■□ 3.09
THBS1-202ENST00000397591 MYO15BQ96JP2 1530 aa34.12■■■■□ 3.05
THBS1-202ENST00000397591 DCAF1Q9Y4B6 1507 aa34.04■■■■□ 3.04
THBS1-202ENST00000397591 UNC13AQ9UPW8 1703 aa33.9■■■■□ 3.02
THBS1-202ENST00000397591 SCRIBQ14160 1630 aa33.54■■■□□ 2.96
THBS1-202ENST00000397591 PABPN1Q86U42 306 aaKnown RBP eCLIP33.5■■■□□ 2.95
THBS1-202ENST00000397591 BICRAQ9NZM4 1560 aa33.42■■■□□ 2.94
THBS1-202ENST00000397591 SHROOM4Q9ULL8 1493 aa32.93■■■□□ 2.86
THBS1-202ENST00000397591 DNAJC5BQ9UF47 199 aa32.76■■■□□ 2.83
THBS1-202ENST00000397591 EIF4G1Q04637 1599 aaKnown RBP32.53■■■□□ 2.8
THBS1-202ENST00000397591 CC2D2AQ9P2K1 1620 aa32.43■■■□□ 2.78
THBS1-202ENST00000397591 CECR2Q9BXF3 1484 aa32.15■■■□□ 2.74
THBS1-202ENST00000397591 SMARCA4P51532 1647 aa32.04■■■□□ 2.72
THBS1-202ENST00000397591 BAZ1AQ9NRL2 1556 aaPredicted RBP31.96■■■□□ 2.71
THBS1-202ENST00000397591 MROH2BQ7Z745 1585 aa31.81■■■□□ 2.68
THBS1-202ENST00000397591 ATAD2BQ9ULI0 1458 aa31.77■■■□□ 2.68
THBS1-202ENST00000397591 SMARCA2P51531 1590 aa31.75■■■□□ 2.67
THBS1-202ENST00000397591 NCAPD3P42695 1498 aa31.7■■■□□ 2.66
THBS1-202ENST00000397591 PEG3Q9GZU2 1588 aa31.62■■■□□ 2.65
THBS1-202ENST00000397591 HMGXB3Q12766 1538 aa31.58■■■□□ 2.65
THBS1-202ENST00000397591 WIZO95785 1651 aa31.57■■■□□ 2.65
THBS1-202ENST00000397591 BAZ1BQ9UIG0 1483 aaKnown RBP31.55■■■□□ 2.64
THBS1-202ENST00000397591 RSF1Q96T23 1441 aaPredicted RBP31.43■■■□□ 2.62
THBS1-202ENST00000397591 TOP2AP11388 1531 aaKnown RBP31.14■■■□□ 2.57
THBS1-202ENST00000397591 NESP48681 1621 aa31.03■■■□□ 2.56
THBS1-202ENST00000397591 LAMC3Q9Y6N6 1575 aa30.92■■■□□ 2.54
THBS1-202ENST00000397591 ERCC6Q03468 1493 aa30.86■■■□□ 2.53
THBS1-202ENST00000397591 SUPT5HO00267 1087 aaKnown RBP30.84■■■□□ 2.53
THBS1-202ENST00000397591 CADPSQ9ULU8 1353 aa30.8■■■□□ 2.52
THBS1-202ENST00000397591 KIF21AQ7Z4S6 1674 aa30.78■■■□□ 2.52
THBS1-202ENST00000397591 CCDC88BA6NC98 1476 aa30.77■■■□□ 2.52
THBS1-202ENST00000397591 PDS5BQ9NTI5 1447 aa30.67■■■□□ 2.5
THBS1-202ENST00000397591 PRDM2Q13029 1718 aa30.65■■■□□ 2.5
THBS1-202ENST00000397591 CFTRP13569 1480 aa30.63■■■□□ 2.49
THBS1-202ENST00000397591 THOC2Q8NI27 1593 aaKnown RBP30.53■■■□□ 2.48
THBS1-202ENST00000397591 FANCD2Q9BXW9 1451 aa30.5■■■□□ 2.47
THBS1-202ENST00000397591 CEP164Q9UPV0 1460 aa30.45■■■□□ 2.47
THBS1-202ENST00000397591 CUX2O14529 1486 aa30.42■■■□□ 2.46
THBS1-202ENST00000397591 MRC2Q9UBG0 1479 aa30.38■■■□□ 2.45
THBS1-202ENST00000397591 WDR62O43379 1518 aa30.27■■■□□ 2.44
THBS1-202ENST00000397591 URB2Q14146 1524 aaKnown RBP30.19■■■□□ 2.42
THBS1-202ENST00000397591 TOPBP1Q92547 1522 aa30.03■■■□□ 2.4
THBS1-202ENST00000397591 DNMBPQ6XZF7 1577 aa30.01■■■□□ 2.39
THBS1-202ENST00000397591 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
THBS1-202ENST00000397591 CUX1P39880 1505 aa29.84■■■□□ 2.37
THBS1-202ENST00000397591 IFT140Q96RY7 1462 aa29.78■■■□□ 2.36
THBS1-202ENST00000397591 POLA1P09884 1462 aaPredicted RBP29.75■■■□□ 2.35
THBS1-202ENST00000397591 FGD5Q6ZNL6 1462 aa29.74■■■□□ 2.35
THBS1-202ENST00000397591 TARBP1Q13395 1621 aaKnown RBP29.71■■■□□ 2.35
THBS1-202ENST00000397591 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
THBS1-202ENST00000397591 ZNF608Q9ULD9 1512 aaPredicted RBP29.68■■■□□ 2.34
THBS1-202ENST00000397591 SOGA1O94964 1423 aa29.65■■■□□ 2.34
THBS1-202ENST00000397591 WRNQ14191 1432 aaPredicted RBP eCLIP29.65■■■□□ 2.34
THBS1-202ENST00000397591 BIVM-ERCC5R4GMW8 1640 aa29.65■■■□□ 2.34
THBS1-202ENST00000397591 SYNJ1O43426 1573 aa29.64■■■□□ 2.33
THBS1-202ENST00000397591 TOP2BQ02880 1626 aa29.61■■■□□ 2.33
THBS1-202ENST00000397591 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
THBS1-202ENST00000397591 WDR97A6NE52 1622 aa29.54■■■□□ 2.32
THBS1-202ENST00000397591 AQRO60306 1485 aaKnown RBP eCLIP29.54■■■□□ 2.322e-8■■■■■ 27.7
THBS1-202ENST00000397591 TDRD9Q8NDG6 1382 aaKnown RBP29.49■■■□□ 2.31
THBS1-202ENST00000397591 DNAJC5Q9H3Z4 198 aa29.4■■■□□ 2.3
THBS1-202ENST00000397591 PBRM1Q86U86 1689 aa29.4■■■□□ 2.3
THBS1-202ENST00000397591 ABCA10Q8WWZ4 1543 aa29.4■■■□□ 2.3
THBS1-202ENST00000397591 CHD1O14646 1710 aa29.34■■■□□ 2.29
THBS1-202ENST00000397591 ABCA5Q8WWZ7 1642 aa29.33■■■□□ 2.29
THBS1-202ENST00000397591 GAPVD1Q14C86 1478 aa29.31■■■□□ 2.28
THBS1-202ENST00000397591 GRIN2BQ13224 1484 aa29.28■■■□□ 2.28
THBS1-202ENST00000397591 SNAPC4Q5SXM2 1469 aa29.26■■■□□ 2.27
THBS1-202ENST00000397591 FBLN2P98095 1184 aa29.23■■■□□ 2.27
THBS1-202ENST00000397591 OSCARQ8IYS5 282 aa29.22■■■□□ 2.27
THBS1-202ENST00000397591 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
THBS1-202ENST00000397591 CHMP7Q8WUX9 453 aaPredicted RBP29.1■■■□□ 2.25
THBS1-202ENST00000397591 TRIM41Q8WV44 630 aa29.07■■■□□ 2.24
THBS1-202ENST00000397591 SYNJ2O15056 1496 aa29.06■■■□□ 2.24
THBS1-202ENST00000397591 ERICH3Q5RHP9 1530 aa29.05■■■□□ 2.24
THBS1-202ENST00000397591 ADAMTS12P58397 1594 aa29.05■■■□□ 2.24
THBS1-202ENST00000397591 KIF27Q86VH2 1401 aa29.03■■■□□ 2.24
THBS1-202ENST00000397591 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
THBS1-202ENST00000397591 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
THBS1-202ENST00000397591 CUL7Q14999 1698 aa28.88■■■□□ 2.21
THBS1-202ENST00000397591 IGF1RP08069 1367 aa28.88■■■□□ 2.21
THBS1-202ENST00000397591 RUSC2Q8N2Y8 1516 aa28.87■■■□□ 2.21
THBS1-202ENST00000397591 CLASP1Q7Z460 1538 aa28.84■■■□□ 2.21
THBS1-202ENST00000397591 RIMBP3CA6NJZ7 1639 aa28.83■■■□□ 2.21
THBS1-202ENST00000397591 RIMBP3BA6NNM3 1639 aa28.83■■■□□ 2.21
THBS1-202ENST00000397591 RIMBP3Q9UFD9 1639 aa28.83■■■□□ 2.21
THBS1-202ENST00000397591 CEP170Q5SW79 1584 aa28.81■■■□□ 2.2
THBS1-202ENST00000397591 ARHGEF11O15085 1522 aa28.76■■■□□ 2.19
THBS1-202ENST00000397591 CHIC1Q5VXU3 224 aa28.76■■■□□ 2.19
THBS1-202ENST00000397591 CARMIL1Q5VZK9 1371 aa28.74■■■□□ 2.19
THBS1-202ENST00000397591 NUP160Q12769 1436 aa28.73■■■□□ 2.19
THBS1-202ENST00000397591 RAPGEF2Q9Y4G8 1499 aa28.59■■■□□ 2.17
THBS1-202ENST00000397591 SHROOM2Q13796 1616 aa28.58■■■□□ 2.17
THBS1-202ENST00000397591 FAM9AQ8IZU1 332 aaPredicted RBP28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms