RNA–Protein interactions for RNA: ENST00000397540.7

PLAC9P1-201, Transcript of placenta specific 9 pseudogene 1, humanhuman

TSL 2 BASIC

Gene PLAC9P1, Length 389 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLAC9P1-201ENST00000397540 NISCHQ9Y2I1 1504 aa33.47■■■□□ 2.95
PLAC9P1-201ENST00000397540 ABCC9O60706 1549 aa30.4■■■□□ 2.46
PLAC9P1-201ENST00000397540 CCDC180Q9P1Z9 1646 aa30.14■■■□□ 2.42
PLAC9P1-201ENST00000397540 RB1CC1Q8TDY2 1594 aa28.79■■■□□ 2.2
PLAC9P1-201ENST00000397540 DNAJC5BQ9UF47 199 aa28.69■■■□□ 2.18
PLAC9P1-201ENST00000397540 NACADO15069 1562 aa28.51■■■□□ 2.15
PLAC9P1-201ENST00000397540 DCAF8L2P0C7V8 631 aa28.35■■■□□ 2.13
PLAC9P1-201ENST00000397540 PABPN1Q86U42 306 aaKnown RBP eCLIP28.25■■■□□ 2.11
PLAC9P1-201ENST00000397540 UNC13AQ9UPW8 1703 aa28.25■■■□□ 2.11
PLAC9P1-201ENST00000397540 BICRAQ9NZM4 1560 aa28.01■■■□□ 2.07
PLAC9P1-201ENST00000397540 MYO15BQ96JP2 1530 aa27.99■■■□□ 2.07
PLAC9P1-201ENST00000397540 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.02
PLAC9P1-201ENST00000397540 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
PLAC9P1-201ENST00000397540 SCRIBQ14160 1630 aa27.52■■■□□ 2
PLAC9P1-201ENST00000397540 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
PLAC9P1-201ENST00000397540 CC2D2AQ9P2K1 1620 aa27.45■■□□□ 1.98
PLAC9P1-201ENST00000397540 CECR2Q9BXF3 1484 aa27.37■■□□□ 1.97
PLAC9P1-201ENST00000397540 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
PLAC9P1-201ENST00000397540 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
PLAC9P1-201ENST00000397540 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
PLAC9P1-201ENST00000397540 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
PLAC9P1-201ENST00000397540 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
PLAC9P1-201ENST00000397540 CUX2O14529 1486 aa26.21■■□□□ 1.79
PLAC9P1-201ENST00000397540 SMARCA4P51532 1647 aa26.19■■□□□ 1.78
PLAC9P1-201ENST00000397540 SMARCA2P51531 1590 aa26.13■■□□□ 1.77
PLAC9P1-201ENST00000397540 HMGXB3Q12766 1538 aa26.12■■□□□ 1.77
PLAC9P1-201ENST00000397540 NESP48681 1621 aa26.06■■□□□ 1.76
PLAC9P1-201ENST00000397540 BAZ1AQ9NRL2 1556 aaPredicted RBP25.99■■□□□ 1.75
PLAC9P1-201ENST00000397540 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
PLAC9P1-201ENST00000397540 PEG3Q9GZU2 1588 aa25.89■■□□□ 1.73
PLAC9P1-201ENST00000397540 THOC2Q8NI27 1593 aaKnown RBP25.84■■□□□ 1.73
PLAC9P1-201ENST00000397540 MROH2BQ7Z745 1585 aa25.83■■□□□ 1.73
PLAC9P1-201ENST00000397540 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
PLAC9P1-201ENST00000397540 KIF21AQ7Z4S6 1674 aa25.76■■□□□ 1.71
PLAC9P1-201ENST00000397540 PDS5BQ9NTI5 1447 aa25.6■■□□□ 1.69
PLAC9P1-201ENST00000397540 WIZO95785 1651 aa25.54■■□□□ 1.68
PLAC9P1-201ENST00000397540 CADPSQ9ULU8 1353 aa25.49■■□□□ 1.67
PLAC9P1-201ENST00000397540 MRC2Q9UBG0 1479 aa25.45■■□□□ 1.66
PLAC9P1-201ENST00000397540 WDR62O43379 1518 aa25.4■■□□□ 1.66
PLAC9P1-201ENST00000397540 CEP164Q9UPV0 1460 aa25.3■■□□□ 1.64
PLAC9P1-201ENST00000397540 TRIM41Q8WV44 630 aa25.26■■□□□ 1.63
PLAC9P1-201ENST00000397540 FANCD2Q9BXW9 1451 aa25.26■■□□□ 1.63
PLAC9P1-201ENST00000397540 CFTRP13569 1480 aa25.18■■□□□ 1.62
PLAC9P1-201ENST00000397540 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
PLAC9P1-201ENST00000397540 TOP2AP11388 1531 aaKnown RBP25.15■■□□□ 1.62
PLAC9P1-201ENST00000397540 URB2Q14146 1524 aaKnown RBP25.09■■□□□ 1.61
PLAC9P1-201ENST00000397540 PRDM2Q13029 1718 aa25■■□□□ 1.59
PLAC9P1-201ENST00000397540 OSCARQ8IYS5 282 aa24.95■■□□□ 1.58
PLAC9P1-201ENST00000397540 CCDC88BA6NC98 1476 aa24.86■■□□□ 1.57
PLAC9P1-201ENST00000397540 ZNF608Q9ULD9 1512 aaPredicted RBP24.83■■□□□ 1.57
PLAC9P1-201ENST00000397540 IFT140Q96RY7 1462 aa24.77■■□□□ 1.56
PLAC9P1-201ENST00000397540 RIMBP3CA6NJZ7 1639 aa24.77■■□□□ 1.56
PLAC9P1-201ENST00000397540 RIMBP3BA6NNM3 1639 aa24.77■■□□□ 1.56
PLAC9P1-201ENST00000397540 RIMBP3Q9UFD9 1639 aa24.77■■□□□ 1.56
PLAC9P1-201ENST00000397540 TOPBP1Q92547 1522 aa24.76■■□□□ 1.55
PLAC9P1-201ENST00000397540 EIF4G3O43432 1585 aaKnown RBP24.7■■□□□ 1.54
PLAC9P1-201ENST00000397540 DNMBPQ6XZF7 1577 aa24.65■■□□□ 1.54
PLAC9P1-201ENST00000397540 ARHGEF11O15085 1522 aa24.63■■□□□ 1.53
PLAC9P1-201ENST00000397540 ABCC8Q09428 1581 aa24.61■■□□□ 1.53
PLAC9P1-201ENST00000397540 CHD1O14646 1710 aa24.58■■□□□ 1.53
PLAC9P1-201ENST00000397540 TARBP1Q13395 1621 aaKnown RBP24.58■■□□□ 1.53
PLAC9P1-201ENST00000397540 AQRO60306 1485 aaKnown RBP eCLIP24.55■■□□□ 1.52
PLAC9P1-201ENST00000397540 POLA1P09884 1462 aaPredicted RBP24.5■■□□□ 1.51
PLAC9P1-201ENST00000397540 CYB5RLQ6IPT4 315 aa24.43■■□□□ 1.5
PLAC9P1-201ENST00000397540 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
PLAC9P1-201ENST00000397540 FBLN2P98095 1184 aa24.42■■□□□ 1.5
PLAC9P1-201ENST00000397540 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
PLAC9P1-201ENST00000397540 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
PLAC9P1-201ENST00000397540 SOGA1O94964 1423 aa24.35■■□□□ 1.49
PLAC9P1-201ENST00000397540 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
PLAC9P1-201ENST00000397540 SNAPC4Q5SXM2 1469 aa24.31■■□□□ 1.48
PLAC9P1-201ENST00000397540 CUX1P39880 1505 aa24.28■■□□□ 1.48
PLAC9P1-201ENST00000397540 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
PLAC9P1-201ENST00000397540 TRHP20396 242 aaPredicted RBP24.24■■□□□ 1.47
PLAC9P1-201ENST00000397540 CLASP1Q7Z460 1538 aa24.24■■□□□ 1.47
PLAC9P1-201ENST00000397540 SYNJ1O43426 1573 aa24.18■■□□□ 1.46
PLAC9P1-201ENST00000397540 MAGI1Q96QZ7 1491 aaPredicted RBP24.18■■□□□ 1.46
PLAC9P1-201ENST00000397540 GRIN2BQ13224 1484 aa24.16■■□□□ 1.46
PLAC9P1-201ENST00000397540 CHMP7Q8WUX9 453 aaPredicted RBP24.16■■□□□ 1.46
PLAC9P1-201ENST00000397540 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
PLAC9P1-201ENST00000397540 SYNJ2O15056 1496 aa24.12■■□□□ 1.45
PLAC9P1-201ENST00000397540 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
PLAC9P1-201ENST00000397540 ABCA5Q8WWZ7 1642 aa24.03■■□□□ 1.44
PLAC9P1-201ENST00000397540 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
PLAC9P1-201ENST00000397540 SUPT5HO00267 1087 aaKnown RBP23.92■■□□□ 1.42
PLAC9P1-201ENST00000397540 ERCC6L2Q5T890 1561 aa23.9■■□□□ 1.42
PLAC9P1-201ENST00000397540 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
PLAC9P1-201ENST00000397540 ADAMTS12P58397 1594 aa23.87■■□□□ 1.41
PLAC9P1-201ENST00000397540 CEP170Q5SW79 1584 aa23.85■■□□□ 1.41
PLAC9P1-201ENST00000397540 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
PLAC9P1-201ENST00000397540 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
PLAC9P1-201ENST00000397540 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
PLAC9P1-201ENST00000397540 NUP160Q12769 1436 aa23.78■■□□□ 1.4
PLAC9P1-201ENST00000397540 SHROOM2Q13796 1616 aa23.74■■□□□ 1.39
PLAC9P1-201ENST00000397540 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
PLAC9P1-201ENST00000397540 ERICH3Q5RHP9 1530 aa23.69■■□□□ 1.38
PLAC9P1-201ENST00000397540 AEBP2Q6ZN18 517 aaPredicted RBP23.67■■□□□ 1.38
PLAC9P1-201ENST00000397540 KIF13AQ9H1H9 1805 aa23.59■■□□□ 1.37
PLAC9P1-201ENST00000397540 PRG4Q92954 1404 aaPredicted RBP23.59■■□□□ 1.37
PLAC9P1-201ENST00000397540 RUSC2Q8N2Y8 1516 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms