RNA–Protein interactions for RNA: ENST00000397304.6

TNNT3-209, Transcript of troponin T3, fast skeletal type, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNNT3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNNT3-209ENST00000397304 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
TNNT3-209ENST00000397304 ABCC9O60706 1549 aa20.96■□□□□ 0.95
TNNT3-209ENST00000397304 CCDC180Q9P1Z9 1646 aa20.88■□□□□ 0.93
TNNT3-209ENST00000397304 RB1CC1Q8TDY2 1594 aa19.92■□□□□ 0.78
TNNT3-209ENST00000397304 DNAJC5BQ9UF47 199 aa19.87■□□□□ 0.77
TNNT3-209ENST00000397304 NACADO15069 1562 aa19.73■□□□□ 0.75
TNNT3-209ENST00000397304 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
TNNT3-209ENST00000397304 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
TNNT3-209ENST00000397304 BICRAQ9NZM4 1560 aa19.39■□□□□ 0.69
TNNT3-209ENST00000397304 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
TNNT3-209ENST00000397304 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
TNNT3-209ENST00000397304 SHROOM4Q9ULL8 1493 aa19.15■□□□□ 0.66
TNNT3-209ENST00000397304 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
TNNT3-209ENST00000397304 ZCCHC6Q5VYS8 1495 aaKnown RBP19.04■□□□□ 0.64
TNNT3-209ENST00000397304 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
TNNT3-209ENST00000397304 CECR2Q9BXF3 1484 aa18.94■□□□□ 0.62
TNNT3-209ENST00000397304 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
TNNT3-209ENST00000397304 SCRIBQ14160 1630 aa18.88■□□□□ 0.61
TNNT3-209ENST00000397304 DNAJC5Q9H3Z4 198 aa18.47■□□□□ 0.55
TNNT3-209ENST00000397304 CUX2O14529 1486 aa18.27■□□□□ 0.52
TNNT3-209ENST00000397304 NCAPD3P42695 1498 aa18.19■□□□□ 0.5
TNNT3-209ENST00000397304 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
TNNT3-209ENST00000397304 HMGXB3Q12766 1538 aa18.08■□□□□ 0.49
TNNT3-209ENST00000397304 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
TNNT3-209ENST00000397304 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
TNNT3-209ENST00000397304 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
TNNT3-209ENST00000397304 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
TNNT3-209ENST00000397304 NESP48681 1621 aa17.94■□□□□ 0.46
TNNT3-209ENST00000397304 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
TNNT3-209ENST00000397304 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
TNNT3-209ENST00000397304 BAZ1BQ9UIG0 1483 aaKnown RBP17.87■□□□□ 0.45
TNNT3-209ENST00000397304 LAMC3Q9Y6N6 1575 aa17.86■□□□□ 0.45
TNNT3-209ENST00000397304 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
TNNT3-209ENST00000397304 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
TNNT3-209ENST00000397304 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
TNNT3-209ENST00000397304 WDR62O43379 1518 aa17.61■□□□□ 0.41
TNNT3-209ENST00000397304 MRC2Q9UBG0 1479 aa17.58■□□□□ 0.41
TNNT3-209ENST00000397304 CADPSQ9ULU8 1353 aa17.56■□□□□ 0.4
TNNT3-209ENST00000397304 WIZO95785 1651 aa17.49■□□□□ 0.39
TNNT3-209ENST00000397304 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
TNNT3-209ENST00000397304 TRIM41Q8WV44 630 aa17.44■□□□□ 0.38
TNNT3-209ENST00000397304 FANCD2Q9BXW9 1451 aa17.38■□□□□ 0.37
TNNT3-209ENST00000397304 CFTRP13569 1480 aa17.36■□□□□ 0.37
TNNT3-209ENST00000397304 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
TNNT3-209ENST00000397304 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
TNNT3-209ENST00000397304 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.36
TNNT3-209ENST00000397304 OSCARQ8IYS5 282 aa17.23■□□□□ 0.35
TNNT3-209ENST00000397304 RSF1Q96T23 1441 aaPredicted RBP17.2■□□□□ 0.34
TNNT3-209ENST00000397304 RIMBP3CA6NJZ7 1639 aa17.19■□□□□ 0.34
TNNT3-209ENST00000397304 RIMBP3BA6NNM3 1639 aa17.19■□□□□ 0.34
TNNT3-209ENST00000397304 RIMBP3Q9UFD9 1639 aa17.19■□□□□ 0.34
TNNT3-209ENST00000397304 IFT140Q96RY7 1462 aa17.11■□□□□ 0.33
TNNT3-209ENST00000397304 ARHGEF11O15085 1522 aa17.09■□□□□ 0.33
TNNT3-209ENST00000397304 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
TNNT3-209ENST00000397304 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
TNNT3-209ENST00000397304 TOPBP1Q92547 1522 aa17.05■□□□□ 0.32
TNNT3-209ENST00000397304 CCDC88BA6NC98 1476 aa17.01■□□□□ 0.31
TNNT3-209ENST00000397304 CHD1O14646 1710 aa16.99■□□□□ 0.31
TNNT3-209ENST00000397304 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
TNNT3-209ENST00000397304 DNMBPQ6XZF7 1577 aa16.99■□□□□ 0.31
TNNT3-209ENST00000397304 TARBP1Q13395 1621 aaKnown RBP16.97■□□□□ 0.31
TNNT3-209ENST00000397304 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
TNNT3-209ENST00000397304 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.29
TNNT3-209ENST00000397304 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
TNNT3-209ENST00000397304 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
TNNT3-209ENST00000397304 CYB5RLQ6IPT4 315 aa16.82■□□□□ 0.28
TNNT3-209ENST00000397304 CLASP1Q7Z460 1538 aa16.8■□□□□ 0.28
TNNT3-209ENST00000397304 RAD54L2Q9Y4B4 1467 aa16.74■□□□□ 0.27
TNNT3-209ENST00000397304 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
TNNT3-209ENST00000397304 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
TNNT3-209ENST00000397304 MAGI1Q96QZ7 1491 aaPredicted RBP16.71■□□□□ 0.27
TNNT3-209ENST00000397304 SOGA1O94964 1423 aa16.7■□□□□ 0.26
TNNT3-209ENST00000397304 FGD5Q6ZNL6 1462 aa16.69■□□□□ 0.26
TNNT3-209ENST00000397304 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
TNNT3-209ENST00000397304 FBLN2P98095 1184 aa16.68■□□□□ 0.26
TNNT3-209ENST00000397304 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
TNNT3-209ENST00000397304 PBRM1Q86U86 1689 aa16.65■□□□□ 0.26
TNNT3-209ENST00000397304 CUX1P39880 1505 aa16.65■□□□□ 0.26
TNNT3-209ENST00000397304 SYNJ2O15056 1496 aa16.64■□□□□ 0.25
TNNT3-209ENST00000397304 GRIN2BQ13224 1484 aa16.64■□□□□ 0.25
TNNT3-209ENST00000397304 ABCA5Q8WWZ7 1642 aa16.58■□□□□ 0.24
TNNT3-209ENST00000397304 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
TNNT3-209ENST00000397304 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
TNNT3-209ENST00000397304 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
TNNT3-209ENST00000397304 ERCC6L2Q5T890 1561 aa16.46■□□□□ 0.23
TNNT3-209ENST00000397304 GRIN2AQ12879 1464 aa16.45■□□□□ 0.22
TNNT3-209ENST00000397304 ADAMTS12P58397 1594 aa16.45■□□□□ 0.22
TNNT3-209ENST00000397304 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
TNNT3-209ENST00000397304 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
TNNT3-209ENST00000397304 NUP160Q12769 1436 aa16.42■□□□□ 0.22
TNNT3-209ENST00000397304 AEBP2Q6ZN18 517 aaPredicted RBP16.41■□□□□ 0.22
TNNT3-209ENST00000397304 BIVM-ERCC5R4GMW8 1640 aa16.38■□□□□ 0.21
TNNT3-209ENST00000397304 KIF13AQ9H1H9 1805 aa16.38■□□□□ 0.21
TNNT3-209ENST00000397304 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
TNNT3-209ENST00000397304 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.2
TNNT3-209ENST00000397304 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
TNNT3-209ENST00000397304 FHAD1B1AJZ9 1412 aa16.31■□□□□ 0.2
TNNT3-209ENST00000397304 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
TNNT3-209ENST00000397304 MAPKBP1O60336 1514 aa16.21■□□□□ 0.19
TNNT3-209ENST00000397304 PRG4Q92954 1404 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms