RNA–Protein interactions for RNA: ENST00000397154.7

NGDN-201, Transcript of neuroguidin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NGDN, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-201ENST00000397154 NISCHQ9Y2I1 1504 aa21.77■■□□□ 1.08
NGDN-201ENST00000397154 ABCC9O60706 1549 aa19.68■□□□□ 0.74
NGDN-201ENST00000397154 CCDC180Q9P1Z9 1646 aa19.63■□□□□ 0.73
NGDN-201ENST00000397154 RB1CC1Q8TDY2 1594 aa18.74■□□□□ 0.59
NGDN-201ENST00000397154 NACADO15069 1562 aa18.59■□□□□ 0.57
NGDN-201ENST00000397154 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
NGDN-201ENST00000397154 DCAF8L2P0C7V8 631 aa18.35■□□□□ 0.53
NGDN-201ENST00000397154 MYO15BQ96JP2 1530 aa18.31■□□□□ 0.52
NGDN-201ENST00000397154 PABPN1Q86U42 306 aaKnown RBP eCLIP18.26■□□□□ 0.51
NGDN-201ENST00000397154 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
NGDN-201ENST00000397154 BICRAQ9NZM4 1560 aa18.14■□□□□ 0.49
NGDN-201ENST00000397154 ZCCHC6Q5VYS8 1495 aaKnown RBP18.03■□□□□ 0.48
NGDN-201ENST00000397154 DCAF1Q9Y4B6 1507 aa18.02■□□□□ 0.48
NGDN-201ENST00000397154 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
NGDN-201ENST00000397154 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
NGDN-201ENST00000397154 CC2D2AQ9P2K1 1620 aa17.78■□□□□ 0.44
NGDN-201ENST00000397154 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.43
NGDN-201ENST00000397154 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
NGDN-201ENST00000397154 DNAJC5Q9H3Z4 198 aa17.14■□□□□ 0.33
NGDN-201ENST00000397154 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
NGDN-201ENST00000397154 CUX2O14529 1486 aa17.08■□□□□ 0.33
NGDN-201ENST00000397154 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
NGDN-201ENST00000397154 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
NGDN-201ENST00000397154 SMARCA2P51531 1590 aa17.04■□□□□ 0.32
NGDN-201ENST00000397154 HMGXB3Q12766 1538 aa17.02■□□□□ 0.32
NGDN-201ENST00000397154 SMARCA4P51532 1647 aa17.01■□□□□ 0.31
NGDN-201ENST00000397154 BAZ1AQ9NRL2 1556 aaPredicted RBP16.93■□□□□ 0.3
NGDN-201ENST00000397154 BAZ1BQ9UIG0 1483 aaKnown RBP16.9■□□□□ 0.3
NGDN-201ENST00000397154 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
NGDN-201ENST00000397154 NESP48681 1621 aa16.85■□□□□ 0.29
NGDN-201ENST00000397154 LAMC3Q9Y6N6 1575 aa16.79■□□□□ 0.28
NGDN-201ENST00000397154 THOC2Q8NI27 1593 aaKnown RBP16.76■□□□□ 0.27
NGDN-201ENST00000397154 MROH2BQ7Z745 1585 aa16.74■□□□□ 0.27
NGDN-201ENST00000397154 PDS5BQ9NTI5 1447 aa16.69■□□□□ 0.26
NGDN-201ENST00000397154 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
NGDN-201ENST00000397154 CADPSQ9ULU8 1353 aa16.6■□□□□ 0.25
NGDN-201ENST00000397154 MRC2Q9UBG0 1479 aa16.56■□□□□ 0.24
NGDN-201ENST00000397154 WIZO95785 1651 aa16.52■□□□□ 0.24
NGDN-201ENST00000397154 WDR62O43379 1518 aa16.51■□□□□ 0.23
NGDN-201ENST00000397154 CEP164Q9UPV0 1460 aa16.46■□□□□ 0.23
NGDN-201ENST00000397154 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
NGDN-201ENST00000397154 CFTRP13569 1480 aa16.39■□□□□ 0.21
NGDN-201ENST00000397154 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
NGDN-201ENST00000397154 RSF1Q96T23 1441 aaPredicted RBP16.36■□□□□ 0.21
NGDN-201ENST00000397154 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
NGDN-201ENST00000397154 URB2Q14146 1524 aaKnown RBP16.27■□□□□ 0.2
NGDN-201ENST00000397154 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
NGDN-201ENST00000397154 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
NGDN-201ENST00000397154 IFT140Q96RY7 1462 aa16.15■□□□□ 0.18
NGDN-201ENST00000397154 CCDC88BA6NC98 1476 aa16.14■□□□□ 0.17
NGDN-201ENST00000397154 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
NGDN-201ENST00000397154 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
NGDN-201ENST00000397154 ZNF608Q9ULD9 1512 aaPredicted RBP16.07■□□□□ 0.16
NGDN-201ENST00000397154 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
NGDN-201ENST00000397154 RIMBP3CA6NJZ7 1639 aa16.03■□□□□ 0.16
NGDN-201ENST00000397154 RIMBP3BA6NNM3 1639 aa16.03■□□□□ 0.16
NGDN-201ENST00000397154 RIMBP3Q9UFD9 1639 aa16.03■□□□□ 0.16
NGDN-201ENST00000397154 EIF4G3O43432 1585 aaKnown RBP16.01■□□□□ 0.15
NGDN-201ENST00000397154 ARHGEF11O15085 1522 aa15.97■□□□□ 0.15
NGDN-201ENST00000397154 TARBP1Q13395 1621 aaKnown RBP15.95■□□□□ 0.14
NGDN-201ENST00000397154 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
NGDN-201ENST00000397154 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.143e-7■■■■■ 36
NGDN-201ENST00000397154 CHD1O14646 1710 aa15.89■□□□□ 0.13
NGDN-201ENST00000397154 WDR97A6NE52 1622 aa15.86■□□□□ 0.13
NGDN-201ENST00000397154 SOGA1O94964 1423 aa15.84■□□□□ 0.13
NGDN-201ENST00000397154 FBLN2P98095 1184 aa15.82■□□□□ 0.12
NGDN-201ENST00000397154 RAD54L2Q9Y4B4 1467 aa15.82■□□□□ 0.12
NGDN-201ENST00000397154 CYB5RLQ6IPT4 315 aa15.82■□□□□ 0.12
NGDN-201ENST00000397154 ARAP1Q96P48 1450 aa15.81■□□□□ 0.12
NGDN-201ENST00000397154 FGD5Q6ZNL6 1462 aa15.8■□□□□ 0.12
NGDN-201ENST00000397154 TDRD9Q8NDG6 1382 aaKnown RBP15.79■□□□□ 0.12
NGDN-201ENST00000397154 SNAPC4Q5SXM2 1469 aa15.78■□□□□ 0.12
NGDN-201ENST00000397154 MAGI1Q96QZ7 1491 aaPredicted RBP15.76■□□□□ 0.11
NGDN-201ENST00000397154 CUX1P39880 1505 aa15.75■□□□□ 0.11
NGDN-201ENST00000397154 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
NGDN-201ENST00000397154 CLASP1Q7Z460 1538 aa15.74■□□□□ 0.11
NGDN-201ENST00000397154 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
NGDN-201ENST00000397154 CHMP7Q8WUX9 453 aaPredicted RBP15.71■□□□□ 0.11
NGDN-201ENST00000397154 TRHP20396 242 aaPredicted RBP15.7■□□□□ 0.1
NGDN-201ENST00000397154 SYNJ2O15056 1496 aa15.7■□□□□ 0.1
NGDN-201ENST00000397154 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
NGDN-201ENST00000397154 PBRM1Q86U86 1689 aa15.65■□□□□ 0.1
NGDN-201ENST00000397154 ABCA10Q8WWZ4 1543 aa15.62■□□□□ 0.09
NGDN-201ENST00000397154 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
NGDN-201ENST00000397154 WRNQ14191 1432 aaPredicted RBP eCLIP15.54■□□□□ 0.08
NGDN-201ENST00000397154 GRIN2AQ12879 1464 aa15.52■□□□□ 0.08
NGDN-201ENST00000397154 ADAMTS12P58397 1594 aa15.51■□□□□ 0.07
NGDN-201ENST00000397154 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
NGDN-201ENST00000397154 BIVM-ERCC5R4GMW8 1640 aa15.49■□□□□ 0.07
NGDN-201ENST00000397154 TOP2BQ02880 1626 aa15.48■□□□□ 0.07
NGDN-201ENST00000397154 NUP160Q12769 1436 aa15.48■□□□□ 0.07
NGDN-201ENST00000397154 FHAD1B1AJZ9 1412 aa15.46■□□□□ 0.07
NGDN-201ENST00000397154 CEP170Q5SW79 1584 aa15.46■□□□□ 0.06
NGDN-201ENST00000397154 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
NGDN-201ENST00000397154 ERCC6L2Q5T890 1561 aa15.43■□□□□ 0.06
NGDN-201ENST00000397154 SHROOM2Q13796 1616 aa15.43■□□□□ 0.06
NGDN-201ENST00000397154 AEBP2Q6ZN18 517 aaPredicted RBP15.36■□□□□ 0.05
NGDN-201ENST00000397154 PRG4Q92954 1404 aaPredicted RBP15.33■□□□□ 0.04
NGDN-201ENST00000397154 RUSC2Q8N2Y8 1516 aa15.29■□□□□ 0.04
NGDN-201ENST00000397154 JPH4Q96JJ6 628 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms