RNA–Protein interactions for RNA: ENST00000396503.7

RSL1D1-202, Transcript of ribosomal L1 domain containing 1, humanhuman

TSL 2

Gene RSL1D1, Length 1,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSL1D1-202ENST00000396503 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
RSL1D1-202ENST00000396503 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
RSL1D1-202ENST00000396503 NISCHQ9Y2I1 1504 aa19.21■□□□□ 0.67
RSL1D1-202ENST00000396503 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
RSL1D1-202ENST00000396503 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
RSL1D1-202ENST00000396503 CCDC180Q9P1Z9 1646 aa17.02■□□□□ 0.31
RSL1D1-202ENST00000396503 ABCC9O60706 1549 aa16.54■□□□□ 0.24
RSL1D1-202ENST00000396503 FOXD1Q16676 465 aa16.53■□□□□ 0.24
RSL1D1-202ENST00000396503 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
RSL1D1-202ENST00000396503 DCAF8L2P0C7V8 631 aa16.16■□□□□ 0.18
RSL1D1-202ENST00000396503 ZCCHC6Q5VYS8 1495 aaKnown RBP16.01■□□□□ 0.15
RSL1D1-202ENST00000396503 RB1CC1Q8TDY2 1594 aa15.97■□□□□ 0.15
RSL1D1-202ENST00000396503 NACADO15069 1562 aa15.96■□□□□ 0.15
RSL1D1-202ENST00000396503 MYO15BQ96JP2 1530 aa15.86■□□□□ 0.13
RSL1D1-202ENST00000396503 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
RSL1D1-202ENST00000396503 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
RSL1D1-202ENST00000396503 UNC13AQ9UPW8 1703 aa15.6■□□□□ 0.09
RSL1D1-202ENST00000396503 SCRIBQ14160 1630 aa15.58■□□□□ 0.08
RSL1D1-202ENST00000396503 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
RSL1D1-202ENST00000396503 MSH5O43196 834 aa15.46■□□□□ 0.07
RSL1D1-202ENST00000396503 PPP6R1Q9UPN7 881 aa15.43■□□□□ 0.06
RSL1D1-202ENST00000396503 PIAS4Q8N2W9 510 aaPredicted RBP15.41■□□□□ 0.06
RSL1D1-202ENST00000396503 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
RSL1D1-202ENST00000396503 SHROOM4Q9ULL8 1493 aa15.37■□□□□ 0.05
RSL1D1-202ENST00000396503 ADRA2BP18089 450 aa15.37■□□□□ 0.05
RSL1D1-202ENST00000396503 EIF4G1Q04637 1599 aaKnown RBP15.04■□□□□ -0
RSL1D1-202ENST00000396503 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
RSL1D1-202ENST00000396503 CC2D2AQ9P2K1 1620 aa14.95□□□□□ -0.02
RSL1D1-202ENST00000396503 CECR2Q9BXF3 1484 aa14.94□□□□□ -0.02
RSL1D1-202ENST00000396503 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
RSL1D1-202ENST00000396503 SMARCA4P51532 1647 aa14.89□□□□□ -0.03
RSL1D1-202ENST00000396503 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
RSL1D1-202ENST00000396503 SMARCA2P51531 1590 aa14.77□□□□□ -0.04
RSL1D1-202ENST00000396503 ATAD2BQ9ULI0 1458 aa14.74□□□□□ -0.05
RSL1D1-202ENST00000396503 NCAPD3P42695 1498 aa14.7□□□□□ -0.06
RSL1D1-202ENST00000396503 WIZO95785 1651 aa14.69□□□□□ -0.06
RSL1D1-202ENST00000396503 PEG3Q9GZU2 1588 aa14.69□□□□□ -0.06
RSL1D1-202ENST00000396503 RSF1Q96T23 1441 aaPredicted RBP14.69□□□□□ -0.06
RSL1D1-202ENST00000396503 BAZ1BQ9UIG0 1483 aaKnown RBP14.68□□□□□ -0.06
RSL1D1-202ENST00000396503 HMGXB3Q12766 1538 aa14.65□□□□□ -0.06
RSL1D1-202ENST00000396503 SUPT5HO00267 1087 aaKnown RBP14.57□□□□□ -0.08
RSL1D1-202ENST00000396503 TOP2AP11388 1531 aaKnown RBP14.52□□□□□ -0.09
RSL1D1-202ENST00000396503 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
RSL1D1-202ENST00000396503 LAMC3Q9Y6N6 1575 aa14.33□□□□□ -0.12
RSL1D1-202ENST00000396503 NESP48681 1621 aa14.33□□□□□ -0.12
RSL1D1-202ENST00000396503 CADPSQ9ULU8 1353 aa14.32□□□□□ -0.12
RSL1D1-202ENST00000396503 ERCC6Q03468 1493 aa14.29□□□□□ -0.12
RSL1D1-202ENST00000396503 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
RSL1D1-202ENST00000396503 CFTRP13569 1480 aa14.24□□□□□ -0.13
RSL1D1-202ENST00000396503 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
RSL1D1-202ENST00000396503 KIF21AQ7Z4S6 1674 aa14.19□□□□□ -0.14
RSL1D1-202ENST00000396503 FANCD2Q9BXW9 1451 aa14.16□□□□□ -0.14
RSL1D1-202ENST00000396503 CEP164Q9UPV0 1460 aa14.14□□□□□ -0.15
RSL1D1-202ENST00000396503 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
RSL1D1-202ENST00000396503 MRC2Q9UBG0 1479 aa14.06□□□□□ -0.16
RSL1D1-202ENST00000396503 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
RSL1D1-202ENST00000396503 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
RSL1D1-202ENST00000396503 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
RSL1D1-202ENST00000396503 CUX2O14529 1486 aa14□□□□□ -0.17
RSL1D1-202ENST00000396503 WDR62O43379 1518 aa13.99□□□□□ -0.17
RSL1D1-202ENST00000396503 ABCC8Q09428 1581 aa13.97□□□□□ -0.17
RSL1D1-202ENST00000396503 URB2Q14146 1524 aaKnown RBP13.97□□□□□ -0.17
RSL1D1-202ENST00000396503 DNMBPQ6XZF7 1577 aa13.95□□□□□ -0.18
RSL1D1-202ENST00000396503 TOPBP1Q92547 1522 aa13.93□□□□□ -0.18
RSL1D1-202ENST00000396503 WRNQ14191 1432 aaPredicted RBP eCLIP13.89□□□□□ -0.19
RSL1D1-202ENST00000396503 CUX1P39880 1505 aa13.88□□□□□ -0.19
RSL1D1-202ENST00000396503 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.2
RSL1D1-202ENST00000396503 FGD5Q6ZNL6 1462 aa13.83□□□□□ -0.2
RSL1D1-202ENST00000396503 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
RSL1D1-202ENST00000396503 IFT140Q96RY7 1462 aa13.82□□□□□ -0.2
RSL1D1-202ENST00000396503 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
RSL1D1-202ENST00000396503 SYNJ1O43426 1573 aa13.81□□□□□ -0.2
RSL1D1-202ENST00000396503 SOGA1O94964 1423 aa13.81□□□□□ -0.2
RSL1D1-202ENST00000396503 RAD54L2Q9Y4B4 1467 aa13.78□□□□□ -0.2
RSL1D1-202ENST00000396503 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
RSL1D1-202ENST00000396503 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
RSL1D1-202ENST00000396503 TRIM41Q8WV44 630 aa13.75□□□□□ -0.21
RSL1D1-202ENST00000396503 ZNF608Q9ULD9 1512 aaPredicted RBP13.72□□□□□ -0.21
RSL1D1-202ENST00000396503 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.22
RSL1D1-202ENST00000396503 EIF4G3O43432 1585 aaKnown RBP13.7□□□□□ -0.22
RSL1D1-202ENST00000396503 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.229e-7■■■■□ 22.4
RSL1D1-202ENST00000396503 WDR97A6NE52 1622 aa13.69□□□□□ -0.22
RSL1D1-202ENST00000396503 ABCA10Q8WWZ4 1543 aa13.68□□□□□ -0.22
RSL1D1-202ENST00000396503 GAPVD1Q14C86 1478 aa13.65□□□□□ -0.22
RSL1D1-202ENST00000396503 CACNB1Q02641 598 aaPredicted RBP13.65□□□□□ -0.22
RSL1D1-202ENST00000396503 PBRM1Q86U86 1689 aa13.63□□□□□ -0.23
RSL1D1-202ENST00000396503 GRIN2BQ13224 1484 aa13.61□□□□□ -0.23
RSL1D1-202ENST00000396503 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
RSL1D1-202ENST00000396503 FBLN2P98095 1184 aa13.61□□□□□ -0.23
RSL1D1-202ENST00000396503 KIF27Q86VH2 1401 aa13.6□□□□□ -0.23
RSL1D1-202ENST00000396503 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.24
RSL1D1-202ENST00000396503 CHMP7Q8WUX9 453 aaPredicted RBP13.56□□□□□ -0.24
RSL1D1-202ENST00000396503 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
RSL1D1-202ENST00000396503 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
RSL1D1-202ENST00000396503 CHD1O14646 1710 aa13.53□□□□□ -0.24
RSL1D1-202ENST00000396503 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
RSL1D1-202ENST00000396503 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
RSL1D1-202ENST00000396503 CNKSR2Q8WXI2 1034 aa13.5□□□□□ -0.25
RSL1D1-202ENST00000396503 SYNJ2O15056 1496 aa13.5□□□□□ -0.25
RSL1D1-202ENST00000396503 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms