RNA–Protein interactions for RNA: ENST00000396189.2

PDE1C-204, Transcript of phosphodiesterase 1C, humanhuman

TSL 5

Gene PDE1C, Length 605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-204ENST00000396189 NISCHQ9Y2I1 1504 aa47.39■■■■■ 5.18
PDE1C-204ENST00000396189 CCDC180Q9P1Z9 1646 aa42.39■■■■■ 4.38
PDE1C-204ENST00000396189 ABCC9O60706 1549 aa41.96■■■■■ 4.31
PDE1C-204ENST00000396189 RB1CC1Q8TDY2 1594 aa40.14■■■■■ 4.02
PDE1C-204ENST00000396189 NACADO15069 1562 aa39.93■■■■□ 3.98
PDE1C-204ENST00000396189 DCAF8L2P0C7V8 631 aa39.93■■■■□ 3.98
PDE1C-204ENST00000396189 MYO15BQ96JP2 1530 aa39.46■■■■□ 3.91
PDE1C-204ENST00000396189 ZCCHC6Q5VYS8 1495 aaKnown RBP39.37■■■■□ 3.89
PDE1C-204ENST00000396189 UNC13AQ9UPW8 1703 aa39.3■■■■□ 3.88
PDE1C-204ENST00000396189 DCAF1Q9Y4B6 1507 aa39.13■■■■□ 3.85
PDE1C-204ENST00000396189 PABPN1Q86U42 306 aaKnown RBP eCLIP39.12■■■■□ 3.85
PDE1C-204ENST00000396189 BICRAQ9NZM4 1560 aa38.9■■■■□ 3.82
PDE1C-204ENST00000396189 DNAJC5BQ9UF47 199 aa38.86■■■■□ 3.81
PDE1C-204ENST00000396189 SCRIBQ14160 1630 aa38.71■■■■□ 3.79
PDE1C-204ENST00000396189 SHROOM4Q9ULL8 1493 aa38.4■■■■□ 3.74
PDE1C-204ENST00000396189 EIF4G1Q04637 1599 aaKnown RBP37.93■■■■□ 3.66
PDE1C-204ENST00000396189 CC2D2AQ9P2K1 1620 aa37.93■■■■□ 3.66
PDE1C-204ENST00000396189 CECR2Q9BXF3 1484 aa37.73■■■■□ 3.63
PDE1C-204ENST00000396189 SMARCA4P51532 1647 aa36.92■■■■□ 3.5
PDE1C-204ENST00000396189 NCAPD3P42695 1498 aa36.81■■■■□ 3.48
PDE1C-204ENST00000396189 BAZ1AQ9NRL2 1556 aaPredicted RBP36.79■■■■□ 3.48
PDE1C-204ENST00000396189 ATAD2BQ9ULI0 1458 aa36.79■■■■□ 3.48
PDE1C-204ENST00000396189 SMARCA2P51531 1590 aa36.76■■■■□ 3.48
PDE1C-204ENST00000396189 HMGXB3Q12766 1538 aa36.63■■■■□ 3.45
PDE1C-204ENST00000396189 MROH2BQ7Z745 1585 aa36.53■■■■□ 3.44
PDE1C-204ENST00000396189 BAZ1BQ9UIG0 1483 aaKnown RBP36.52■■■■□ 3.44
PDE1C-204ENST00000396189 PEG3Q9GZU2 1588 aa36.49■■■■□ 3.43
PDE1C-204ENST00000396189 ERCC6Q03468 1493 aa36.24■■■■□ 3.39
PDE1C-204ENST00000396189 WIZO95785 1651 aa36.18■■■■□ 3.38
PDE1C-204ENST00000396189 NESP48681 1621 aa36.16■■■■□ 3.38
PDE1C-204ENST00000396189 LAMC3Q9Y6N6 1575 aa35.98■■■■□ 3.35
PDE1C-204ENST00000396189 CUX2O14529 1486 aa35.94■■■■□ 3.34
PDE1C-204ENST00000396189 RSF1Q96T23 1441 aaPredicted RBP35.91■■■■□ 3.34
PDE1C-204ENST00000396189 KIF21AQ7Z4S6 1674 aa35.78■■■■□ 3.32
PDE1C-204ENST00000396189 PDS5BQ9NTI5 1447 aa35.74■■■■□ 3.31
PDE1C-204ENST00000396189 CADPSQ9ULU8 1353 aa35.74■■■■□ 3.31
PDE1C-204ENST00000396189 TOP2AP11388 1531 aaKnown RBP35.72■■■■□ 3.31
PDE1C-204ENST00000396189 THOC2Q8NI27 1593 aaKnown RBP35.71■■■■□ 3.31
PDE1C-204ENST00000396189 CFTRP13569 1480 aa35.41■■■■□ 3.26
PDE1C-204ENST00000396189 MRC2Q9UBG0 1479 aa35.41■■■■□ 3.26
PDE1C-204ENST00000396189 CEP164Q9UPV0 1460 aa35.39■■■■□ 3.26
PDE1C-204ENST00000396189 DNAJC5Q9H3Z4 198 aa35.38■■■■□ 3.25
PDE1C-204ENST00000396189 FANCD2Q9BXW9 1451 aa35.37■■■■□ 3.25
PDE1C-204ENST00000396189 WDR62O43379 1518 aa35.3■■■■□ 3.24
PDE1C-204ENST00000396189 CCDC88BA6NC98 1476 aa35.29■■■■□ 3.24
PDE1C-204ENST00000396189 PRDM2Q13029 1718 aa35.26■■■■□ 3.23
PDE1C-204ENST00000396189 URB2Q14146 1524 aaKnown RBP35.04■■■■□ 3.2
PDE1C-204ENST00000396189 SUPT5HO00267 1087 aaKnown RBP34.77■■■■□ 3.16
PDE1C-204ENST00000396189 TOPBP1Q92547 1522 aa34.76■■■■□ 3.15
PDE1C-204ENST00000396189 ABCC8Q09428 1581 aa34.7■■■■□ 3.14
PDE1C-204ENST00000396189 DNMBPQ6XZF7 1577 aa34.68■■■■□ 3.14
PDE1C-204ENST00000396189 IFT140Q96RY7 1462 aa34.64■■■■□ 3.14
PDE1C-204ENST00000396189 ZNF608Q9ULD9 1512 aaPredicted RBP34.54■■■■□ 3.12
PDE1C-204ENST00000396189 EIF4G3O43432 1585 aaKnown RBP34.42■■■■□ 3.1
PDE1C-204ENST00000396189 POLA1P09884 1462 aaPredicted RBP34.41■■■■□ 3.1
PDE1C-204ENST00000396189 TARBP1Q13395 1621 aaKnown RBP34.4■■■■□ 3.1
PDE1C-204ENST00000396189 OSCARQ8IYS5 282 aa34.39■■■■□ 3.1
PDE1C-204ENST00000396189 CUX1P39880 1505 aa34.31■■■■□ 3.08
PDE1C-204ENST00000396189 RAD54L2Q9Y4B4 1467 aa34.3■■■■□ 3.08
PDE1C-204ENST00000396189 AQRO60306 1485 aaKnown RBP eCLIP34.28■■■■□ 3.08
PDE1C-204ENST00000396189 FGD5Q6ZNL6 1462 aa34.28■■■■□ 3.08
PDE1C-204ENST00000396189 SOGA1O94964 1423 aa34.27■■■■□ 3.08
PDE1C-204ENST00000396189 TDRD9Q8NDG6 1382 aaKnown RBP34.15■■■■□ 3.06
PDE1C-204ENST00000396189 CHD1O14646 1710 aa34.14■■■■□ 3.06
PDE1C-204ENST00000396189 TRIM41Q8WV44 630 aa34.14■■■■□ 3.06
PDE1C-204ENST00000396189 WDR97A6NE52 1622 aa34.08■■■■□ 3.05
PDE1C-204ENST00000396189 FBLN2P98095 1184 aa34.05■■■■□ 3.04
PDE1C-204ENST00000396189 SNAPC4Q5SXM2 1469 aa33.98■■■■□ 3.03
PDE1C-204ENST00000396189 RIMBP3CA6NJZ7 1639 aa33.94■■■■□ 3.02
PDE1C-204ENST00000396189 RIMBP3BA6NNM3 1639 aa33.94■■■■□ 3.02
PDE1C-204ENST00000396189 RIMBP3Q9UFD9 1639 aa33.94■■■■□ 3.02
PDE1C-204ENST00000396189 GRIN2BQ13224 1484 aa33.93■■■■□ 3.02
PDE1C-204ENST00000396189 WRNQ14191 1432 aaPredicted RBP eCLIP33.92■■■■□ 3.02
PDE1C-204ENST00000396189 PBRM1Q86U86 1689 aa33.92■■■■□ 3.02
PDE1C-204ENST00000396189 BIVM-ERCC5R4GMW8 1640 aa33.91■■■■□ 3.02
PDE1C-204ENST00000396189 TOP2BQ02880 1626 aa33.9■■■■□ 3.02
PDE1C-204ENST00000396189 SYNJ1O43426 1573 aa33.89■■■■□ 3.02
PDE1C-204ENST00000396189 ABCA10Q8WWZ4 1543 aa33.89■■■■□ 3.02
PDE1C-204ENST00000396189 MAGI1Q96QZ7 1491 aaPredicted RBP33.88■■■■□ 3.01
PDE1C-204ENST00000396189 GAPVD1Q14C86 1478 aa33.88■■■■□ 3.01
PDE1C-204ENST00000396189 ARHGEF11O15085 1522 aa33.84■■■■□ 3.01
PDE1C-204ENST00000396189 ABCA5Q8WWZ7 1642 aa33.83■■■■□ 3.01
PDE1C-204ENST00000396189 CHMP7Q8WUX9 453 aaPredicted RBP33.83■■■■□ 3.01
PDE1C-204ENST00000396189 SYNJ2O15056 1496 aa33.76■■■■□ 3
PDE1C-204ENST00000396189 CLASP1Q7Z460 1538 aa33.64■■■□□ 2.98
PDE1C-204ENST00000396189 CYB5RLQ6IPT4 315 aa33.58■■■□□ 2.97
PDE1C-204ENST00000396189 ADAMTS12P58397 1594 aa33.56■■■□□ 2.96
PDE1C-204ENST00000396189 ARAP1Q96P48 1450 aa33.53■■■□□ 2.96
PDE1C-204ENST00000396189 GRIN2AQ12879 1464 aa33.5■■■□□ 2.95
PDE1C-204ENST00000396189 ERICH3Q5RHP9 1530 aa33.48■■■□□ 2.95
PDE1C-204ENST00000396189 FHAD1B1AJZ9 1412 aa33.45■■■□□ 2.94
PDE1C-204ENST00000396189 CEP170Q5SW79 1584 aa33.36■■■□□ 2.93
PDE1C-204ENST00000396189 NUP160Q12769 1436 aa33.32■■■□□ 2.92
PDE1C-204ENST00000396189 KIF27Q86VH2 1401 aa33.25■■■□□ 2.91
PDE1C-204ENST00000396189 ERCC6L2Q5T890 1561 aa33.17■■■□□ 2.9
PDE1C-204ENST00000396189 SHROOM2Q13796 1616 aa33.17■■■□□ 2.9
PDE1C-204ENST00000396189 CUL7Q14999 1698 aa33.15■■■□□ 2.9
PDE1C-204ENST00000396189 IGF1RP08069 1367 aa33.12■■■□□ 2.89
PDE1C-204ENST00000396189 TRHP20396 242 aaPredicted RBP33.12■■■□□ 2.89
PDE1C-204ENST00000396189 RUSC2Q8N2Y8 1516 aa33.07■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms