RNA–Protein interactions for RNA: ENST00000395725.7

PTPN20-207, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5 BASIC

Gene PTPN20, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-207ENST00000395725 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
PTPN20-207ENST00000395725 CCDC180Q9P1Z9 1646 aa25.57■■□□□ 1.68
PTPN20-207ENST00000395725 ABCC9O60706 1549 aa24.89■■□□□ 1.58
PTPN20-207ENST00000395725 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
PTPN20-207ENST00000395725 NACADO15069 1562 aa24.07■■□□□ 1.44
PTPN20-207ENST00000395725 MYO15BQ96JP2 1530 aa23.98■■□□□ 1.43
PTPN20-207ENST00000395725 DCAF1Q9Y4B6 1507 aa23.77■■□□□ 1.4
PTPN20-207ENST00000395725 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
PTPN20-207ENST00000395725 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
PTPN20-207ENST00000395725 UNC13AQ9UPW8 1703 aa23.44■■□□□ 1.34
PTPN20-207ENST00000395725 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
PTPN20-207ENST00000395725 BICRAQ9NZM4 1560 aa23.28■■□□□ 1.32
PTPN20-207ENST00000395725 PABPN1Q86U42 306 aaKnown RBP eCLIP23.16■■□□□ 1.3
PTPN20-207ENST00000395725 SCRIBQ14160 1630 aa23.06■■□□□ 1.28
PTPN20-207ENST00000395725 DNAJC5BQ9UF47 199 aa22.95■■□□□ 1.26
PTPN20-207ENST00000395725 EIF4G1Q04637 1599 aaKnown RBP22.69■■□□□ 1.22
PTPN20-207ENST00000395725 CC2D2AQ9P2K1 1620 aa22.61■■□□□ 1.21
PTPN20-207ENST00000395725 CECR2Q9BXF3 1484 aa22.48■■□□□ 1.19
PTPN20-207ENST00000395725 NCAPD3P42695 1498 aa22.18■■□□□ 1.14
PTPN20-207ENST00000395725 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
PTPN20-207ENST00000395725 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
PTPN20-207ENST00000395725 SMARCA2P51531 1590 aa22.13■■□□□ 1.13
PTPN20-207ENST00000395725 ATAD2BQ9ULI0 1458 aa22.09■■□□□ 1.13
PTPN20-207ENST00000395725 HMGXB3Q12766 1538 aa22.07■■□□□ 1.12
PTPN20-207ENST00000395725 PEG3Q9GZU2 1588 aa22.06■■□□□ 1.12
PTPN20-207ENST00000395725 MROH2BQ7Z745 1585 aa21.9■■□□□ 1.1
PTPN20-207ENST00000395725 BAZ1BQ9UIG0 1483 aaKnown RBP21.88■■□□□ 1.09
PTPN20-207ENST00000395725 WIZO95785 1651 aa21.63■■□□□ 1.05
PTPN20-207ENST00000395725 LAMC3Q9Y6N6 1575 aa21.62■■□□□ 1.05
PTPN20-207ENST00000395725 RSF1Q96T23 1441 aaPredicted RBP21.62■■□□□ 1.05
PTPN20-207ENST00000395725 CUX2O14529 1486 aa21.54■■□□□ 1.04
PTPN20-207ENST00000395725 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
PTPN20-207ENST00000395725 TOP2AP11388 1531 aaKnown RBP21.52■■□□□ 1.03
PTPN20-207ENST00000395725 NESP48681 1621 aa21.47■■□□□ 1.03
PTPN20-207ENST00000395725 CADPSQ9ULU8 1353 aa21.46■■□□□ 1.03
PTPN20-207ENST00000395725 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
PTPN20-207ENST00000395725 THOC2Q8NI27 1593 aaKnown RBP21.33■■□□□ 1.01
PTPN20-207ENST00000395725 CFTRP13569 1480 aa21.31■■□□□ 1
PTPN20-207ENST00000395725 KIF21AQ7Z4S6 1674 aa21.3■■□□□ 1
PTPN20-207ENST00000395725 MRC2Q9UBG0 1479 aa21.22■□□□□ 0.99
PTPN20-207ENST00000395725 PRDM2Q13029 1718 aa21.2■□□□□ 0.98
PTPN20-207ENST00000395725 CEP164Q9UPV0 1460 aa21.19■□□□□ 0.98
PTPN20-207ENST00000395725 CCDC88BA6NC98 1476 aa21.19■□□□□ 0.98
PTPN20-207ENST00000395725 WDR62O43379 1518 aa21.18■□□□□ 0.98
PTPN20-207ENST00000395725 FANCD2Q9BXW9 1451 aa21.17■□□□□ 0.98
PTPN20-207ENST00000395725 ABCC8Q09428 1581 aa20.98■□□□□ 0.95
PTPN20-207ENST00000395725 DNAJC5Q9H3Z4 198 aa20.97■□□□□ 0.95
PTPN20-207ENST00000395725 URB2Q14146 1524 aaKnown RBP20.95■□□□□ 0.94
PTPN20-207ENST00000395725 DNMBPQ6XZF7 1577 aa20.84■□□□□ 0.93
PTPN20-207ENST00000395725 TOPBP1Q92547 1522 aa20.83■□□□□ 0.92
PTPN20-207ENST00000395725 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
PTPN20-207ENST00000395725 SUPT5HO00267 1087 aaKnown RBP20.72■□□□□ 0.91
PTPN20-207ENST00000395725 WDR97A6NE52 1622 aa20.66■□□□□ 0.9
PTPN20-207ENST00000395725 TARBP1Q13395 1621 aaKnown RBP20.63■□□□□ 0.89
PTPN20-207ENST00000395725 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
PTPN20-207ENST00000395725 CUX1P39880 1505 aa20.57■□□□□ 0.88
PTPN20-207ENST00000395725 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
PTPN20-207ENST00000395725 EIF4G3O43432 1585 aaKnown RBP20.55■□□□□ 0.88
PTPN20-207ENST00000395725 SOGA1O94964 1423 aa20.54■□□□□ 0.88
PTPN20-207ENST00000395725 FGD5Q6ZNL6 1462 aa20.53■□□□□ 0.88
PTPN20-207ENST00000395725 OSCARQ8IYS5 282 aa20.5■□□□□ 0.87
PTPN20-207ENST00000395725 RAD54L2Q9Y4B4 1467 aa20.45■□□□□ 0.86
PTPN20-207ENST00000395725 BIVM-ERCC5R4GMW8 1640 aa20.44■□□□□ 0.86
PTPN20-207ENST00000395725 AQRO60306 1485 aaKnown RBP eCLIP20.42■□□□□ 0.86
PTPN20-207ENST00000395725 TOP2BQ02880 1626 aa20.42■□□□□ 0.86
PTPN20-207ENST00000395725 ABCA10Q8WWZ4 1543 aa20.41■□□□□ 0.86
PTPN20-207ENST00000395725 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
PTPN20-207ENST00000395725 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
PTPN20-207ENST00000395725 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
PTPN20-207ENST00000395725 TDRD9Q8NDG6 1382 aaKnown RBP20.35■□□□□ 0.85
PTPN20-207ENST00000395725 ABCA5Q8WWZ7 1642 aa20.32■□□□□ 0.84
PTPN20-207ENST00000395725 CHD1O14646 1710 aa20.31■□□□□ 0.84
PTPN20-207ENST00000395725 GAPVD1Q14C86 1478 aa20.31■□□□□ 0.84
PTPN20-207ENST00000395725 SYNJ1O43426 1573 aa20.3■□□□□ 0.84
PTPN20-207ENST00000395725 PBRM1Q86U86 1689 aa20.29■□□□□ 0.84
PTPN20-207ENST00000395725 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
PTPN20-207ENST00000395725 SYNJ2O15056 1496 aa20.26■□□□□ 0.83
PTPN20-207ENST00000395725 ERICH3Q5RHP9 1530 aa20.19■□□□□ 0.82
PTPN20-207ENST00000395725 CHMP7Q8WUX9 453 aaPredicted RBP20.18■□□□□ 0.82
PTPN20-207ENST00000395725 RIMBP3CA6NJZ7 1639 aa20.17■□□□□ 0.82
PTPN20-207ENST00000395725 RIMBP3BA6NNM3 1639 aa20.17■□□□□ 0.82
PTPN20-207ENST00000395725 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
PTPN20-207ENST00000395725 RIMBP3Q9UFD9 1639 aa20.17■□□□□ 0.82
PTPN20-207ENST00000395725 ARHGEF11O15085 1522 aa20.15■□□□□ 0.82
PTPN20-207ENST00000395725 FBLN2P98095 1184 aa20.13■□□□□ 0.81
PTPN20-207ENST00000395725 ADAMTS12P58397 1594 aa20.13■□□□□ 0.81
PTPN20-207ENST00000395725 FHAD1B1AJZ9 1412 aa20.12■□□□□ 0.81
PTPN20-207ENST00000395725 GRIN2AQ12879 1464 aa20.08■□□□□ 0.8
PTPN20-207ENST00000395725 NUP160Q12769 1436 aa20.04■□□□□ 0.8
PTPN20-207ENST00000395725 KIF27Q86VH2 1401 aa20.03■□□□□ 0.8
PTPN20-207ENST00000395725 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
PTPN20-207ENST00000395725 CUL7Q14999 1698 aa19.98■□□□□ 0.79
PTPN20-207ENST00000395725 ARAP1Q96P48 1450 aa19.96■□□□□ 0.79
PTPN20-207ENST00000395725 CEP170Q5SW79 1584 aa19.94■□□□□ 0.78
PTPN20-207ENST00000395725 SHROOM2Q13796 1616 aa19.93■□□□□ 0.78
PTPN20-207ENST00000395725 IGF1RP08069 1367 aa19.93■□□□□ 0.78
PTPN20-207ENST00000395725 CYB5RLQ6IPT4 315 aa19.86■□□□□ 0.77
PTPN20-207ENST00000395725 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
PTPN20-207ENST00000395725 KIAA0586Q9BVV6 1533 aa19.81■□□□□ 0.76
PTPN20-207ENST00000395725 CARMIL1Q5VZK9 1371 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms