RNA–Protein interactions for RNA: ENST00000395549.3

ATG13-202, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-202ENST00000395549 NISCHQ9Y2I1 1504 aa40.53■■■■■ 4.08
ATG13-202ENST00000395549 CCDC180Q9P1Z9 1646 aa36.26■■■■□ 3.39
ATG13-202ENST00000395549 ABCC9O60706 1549 aa35.73■■■■□ 3.31
ATG13-202ENST00000395549 RB1CC1Q8TDY2 1594 aa34.24■■■■□ 3.07
ATG13-202ENST00000395549 NACADO15069 1562 aa34.1■■■■□ 3.05
ATG13-202ENST00000395549 DCAF8L2P0C7V8 631 aa33.96■■■■□ 3.03
ATG13-202ENST00000395549 MYO15BQ96JP2 1530 aa33.75■■■□□ 2.99
ATG13-202ENST00000395549 ZCCHC6Q5VYS8 1495 aaKnown RBP33.71■■■□□ 2.99
ATG13-202ENST00000395549 UNC13AQ9UPW8 1703 aa33.58■■■□□ 2.97
ATG13-202ENST00000395549 DCAF1Q9Y4B6 1507 aa33.51■■■□□ 2.95
ATG13-202ENST00000395549 PABPN1Q86U42 306 aaKnown RBP eCLIP33.29■■■□□ 2.92
ATG13-202ENST00000395549 BICRAQ9NZM4 1560 aa33.22■■■□□ 2.91
ATG13-202ENST00000395549 SCRIBQ14160 1630 aa33.06■■■□□ 2.88
ATG13-202ENST00000395549 DNAJC5BQ9UF47 199 aa33.02■■■□□ 2.88
ATG13-202ENST00000395549 SHROOM4Q9ULL8 1493 aa32.8■■■□□ 2.84
ATG13-202ENST00000395549 EIF4G1Q04637 1599 aaKnown RBP32.36■■■□□ 2.77
ATG13-202ENST00000395549 CC2D2AQ9P2K1 1620 aa32.33■■■□□ 2.77
ATG13-202ENST00000395549 CECR2Q9BXF3 1484 aa32.12■■■□□ 2.73
ATG13-202ENST00000395549 SMARCA4P51532 1647 aa31.57■■■□□ 2.64
ATG13-202ENST00000395549 BAZ1AQ9NRL2 1556 aaPredicted RBP31.46■■■□□ 2.63
ATG13-202ENST00000395549 NCAPD3P42695 1498 aa31.42■■■□□ 2.62
ATG13-202ENST00000395549 ATAD2BQ9ULI0 1458 aa31.41■■■□□ 2.62
ATG13-202ENST00000395549 SMARCA2P51531 1590 aa31.39■■■□□ 2.61
ATG13-202ENST00000395549 HMGXB3Q12766 1538 aa31.29■■■□□ 2.6
ATG13-202ENST00000395549 MROH2BQ7Z745 1585 aa31.25■■■□□ 2.59
ATG13-202ENST00000395549 PEG3Q9GZU2 1588 aa31.23■■■□□ 2.59
ATG13-202ENST00000395549 BAZ1BQ9UIG0 1483 aaKnown RBP31.17■■■□□ 2.58
ATG13-202ENST00000395549 WIZO95785 1651 aa30.95■■■□□ 2.55
ATG13-202ENST00000395549 NESP48681 1621 aa30.83■■■□□ 2.53
ATG13-202ENST00000395549 ERCC6Q03468 1493 aa30.82■■■□□ 2.53
ATG13-202ENST00000395549 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
ATG13-202ENST00000395549 LAMC3Q9Y6N6 1575 aa30.71■■■□□ 2.51
ATG13-202ENST00000395549 CUX2O14529 1486 aa30.59■■■□□ 2.49
ATG13-202ENST00000395549 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.48
ATG13-202ENST00000395549 KIF21AQ7Z4S6 1674 aa30.54■■■□□ 2.48
ATG13-202ENST00000395549 CADPSQ9ULU8 1353 aa30.49■■■□□ 2.47
ATG13-202ENST00000395549 THOC2Q8NI27 1593 aaKnown RBP30.47■■■□□ 2.47
ATG13-202ENST00000395549 PDS5BQ9NTI5 1447 aa30.46■■■□□ 2.47
ATG13-202ENST00000395549 CFTRP13569 1480 aa30.25■■■□□ 2.43
ATG13-202ENST00000395549 MRC2Q9UBG0 1479 aa30.2■■■□□ 2.43
ATG13-202ENST00000395549 CEP164Q9UPV0 1460 aa30.19■■■□□ 2.42
ATG13-202ENST00000395549 FANCD2Q9BXW9 1451 aa30.19■■■□□ 2.42
ATG13-202ENST00000395549 PRDM2Q13029 1718 aa30.17■■■□□ 2.42
ATG13-202ENST00000395549 CCDC88BA6NC98 1476 aa30.17■■■□□ 2.42
ATG13-202ENST00000395549 WDR62O43379 1518 aa30.13■■■□□ 2.41
ATG13-202ENST00000395549 DNAJC5Q9H3Z4 198 aa29.97■■■□□ 2.39
ATG13-202ENST00000395549 URB2Q14146 1524 aaKnown RBP29.91■■■□□ 2.38
ATG13-202ENST00000395549 SUPT5HO00267 1087 aaKnown RBP29.72■■■□□ 2.35
ATG13-202ENST00000395549 TOPBP1Q92547 1522 aa29.67■■■□□ 2.34
ATG13-202ENST00000395549 DNMBPQ6XZF7 1577 aa29.64■■■□□ 2.33
ATG13-202ENST00000395549 ABCC8Q09428 1581 aa29.62■■■□□ 2.33
ATG13-202ENST00000395549 IFT140Q96RY7 1462 aa29.55■■■□□ 2.32
ATG13-202ENST00000395549 ZNF608Q9ULD9 1512 aaPredicted RBP29.46■■■□□ 2.31
ATG13-202ENST00000395549 TARBP1Q13395 1621 aaKnown RBP29.4■■■□□ 2.3
ATG13-202ENST00000395549 POLA1P09884 1462 aaPredicted RBP29.4■■■□□ 2.3
ATG13-202ENST00000395549 EIF4G3O43432 1585 aaKnown RBP29.39■■■□□ 2.29
ATG13-202ENST00000395549 CUX1P39880 1505 aa29.34■■■□□ 2.29
ATG13-202ENST00000395549 FGD5Q6ZNL6 1462 aa29.29■■■□□ 2.28
ATG13-202ENST00000395549 RAD54L2Q9Y4B4 1467 aa29.27■■■□□ 2.28
ATG13-202ENST00000395549 SOGA1O94964 1423 aa29.24■■■□□ 2.27
ATG13-202ENST00000395549 AQRO60306 1485 aaKnown RBP eCLIP29.23■■■□□ 2.277e-6■□□□□ 9.9
ATG13-202ENST00000395549 OSCARQ8IYS5 282 aa29.21■■■□□ 2.27
ATG13-202ENST00000395549 WDR97A6NE52 1622 aa29.14■■■□□ 2.26
ATG13-202ENST00000395549 CHD1O14646 1710 aa29.13■■■□□ 2.25
ATG13-202ENST00000395549 TDRD9Q8NDG6 1382 aaKnown RBP29.12■■■□□ 2.25
ATG13-202ENST00000395549 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
ATG13-202ENST00000395549 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
ATG13-202ENST00000395549 SYNJ1O43426 1573 aa29.01■■■□□ 2.24
ATG13-202ENST00000395549 WRNQ14191 1432 aaPredicted RBP eCLIP29■■■□□ 2.23
ATG13-202ENST00000395549 PBRM1Q86U86 1689 aa28.99■■■□□ 2.23
ATG13-202ENST00000395549 SNAPC4Q5SXM2 1469 aa28.99■■■□□ 2.23
ATG13-202ENST00000395549 ABCA10Q8WWZ4 1543 aa28.97■■■□□ 2.23
ATG13-202ENST00000395549 GRIN2BQ13224 1484 aa28.96■■■□□ 2.23
ATG13-202ENST00000395549 FBLN2P98095 1184 aa28.94■■■□□ 2.22
ATG13-202ENST00000395549 ABCA5Q8WWZ7 1642 aa28.94■■■□□ 2.22
ATG13-202ENST00000395549 MAGI1Q96QZ7 1491 aaPredicted RBP28.92■■■□□ 2.22
ATG13-202ENST00000395549 GAPVD1Q14C86 1478 aa28.91■■■□□ 2.22
ATG13-202ENST00000395549 RIMBP3CA6NJZ7 1639 aa28.91■■■□□ 2.22
ATG13-202ENST00000395549 RIMBP3BA6NNM3 1639 aa28.91■■■□□ 2.22
ATG13-202ENST00000395549 RIMBP3Q9UFD9 1639 aa28.91■■■□□ 2.22
ATG13-202ENST00000395549 TRIM41Q8WV44 630 aa28.9■■■□□ 2.22
ATG13-202ENST00000395549 ARHGEF11O15085 1522 aa28.82■■■□□ 2.2
ATG13-202ENST00000395549 SYNJ2O15056 1496 aa28.81■■■□□ 2.2
ATG13-202ENST00000395549 CHMP7Q8WUX9 453 aaPredicted RBP28.79■■■□□ 2.2
ATG13-202ENST00000395549 CLASP1Q7Z460 1538 aa28.73■■■□□ 2.19
ATG13-202ENST00000395549 ADAMTS12P58397 1594 aa28.69■■■□□ 2.18
ATG13-202ENST00000395549 ERICH3Q5RHP9 1530 aa28.63■■■□□ 2.17
ATG13-202ENST00000395549 GRIN2AQ12879 1464 aa28.59■■■□□ 2.17
ATG13-202ENST00000395549 ARAP1Q96P48 1450 aa28.57■■■□□ 2.16
ATG13-202ENST00000395549 FHAD1B1AJZ9 1412 aa28.56■■■□□ 2.16
ATG13-202ENST00000395549 CYB5RLQ6IPT4 315 aa28.51■■■□□ 2.15
ATG13-202ENST00000395549 CEP170Q5SW79 1584 aa28.5■■■□□ 2.15
ATG13-202ENST00000395549 NUP160Q12769 1436 aa28.46■■■□□ 2.15
ATG13-202ENST00000395549 KIF27Q86VH2 1401 aa28.41■■■□□ 2.14
ATG13-202ENST00000395549 CUL7Q14999 1698 aa28.36■■■□□ 2.13
ATG13-202ENST00000395549 SHROOM2Q13796 1616 aa28.34■■■□□ 2.13
ATG13-202ENST00000395549 ERCC6L2Q5T890 1561 aa28.32■■■□□ 2.12
ATG13-202ENST00000395549 IGF1RP08069 1367 aa28.3■■■□□ 2.12
ATG13-202ENST00000395549 RUSC2Q8N2Y8 1516 aa28.28■■■□□ 2.12
ATG13-202ENST00000395549 CARMIL1Q5VZK9 1371 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms