RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 NISCHQ9Y2I1 1504 aa57■■■■■ 6.72
PMS2P3-201ENST00000394921 CCDC180Q9P1Z9 1646 aa50.92■■■■■ 5.74
PMS2P3-201ENST00000394921 ABCC9O60706 1549 aa50.39■■■■■ 5.66
PMS2P3-201ENST00000394921 RB1CC1Q8TDY2 1594 aa48.19■■■■■ 5.3
PMS2P3-201ENST00000394921 NACADO15069 1562 aa48■■■■■ 5.27
PMS2P3-201ENST00000394921 DCAF8L2P0C7V8 631 aa47.78■■■■■ 5.24
PMS2P3-201ENST00000394921 MYO15BQ96JP2 1530 aa47.54■■■■■ 5.2
PMS2P3-201ENST00000394921 ZCCHC6Q5VYS8 1495 aaKnown RBP47.36■■■■■ 5.17
PMS2P3-201ENST00000394921 UNC13AQ9UPW8 1703 aa47.17■■■■■ 5.14
PMS2P3-201ENST00000394921 DCAF1Q9Y4B6 1507 aa47.13■■■■■ 5.14
PMS2P3-201ENST00000394921 PABPN1Q86U42 306 aaKnown RBP eCLIP46.99■■■■■ 5.11
PMS2P3-201ENST00000394921 DNAJC5BQ9UF47 199 aa46.85■■■■■ 5.09
PMS2P3-201ENST00000394921 BICRAQ9NZM4 1560 aa46.83■■■■■ 5.09
PMS2P3-201ENST00000394921 SCRIBQ14160 1630 aa46.42■■■■■ 5.02
PMS2P3-201ENST00000394921 SHROOM4Q9ULL8 1493 aa46.21■■■■■ 4.99
PMS2P3-201ENST00000394921 EIF4G1Q04637 1599 aaKnown RBP45.6■■■■■ 4.89
PMS2P3-201ENST00000394921 CC2D2AQ9P2K1 1620 aa45.56■■■■■ 4.88
PMS2P3-201ENST00000394921 CECR2Q9BXF3 1484 aa45.33■■■■■ 4.85
PMS2P3-201ENST00000394921 SMARCA4P51532 1647 aa44.35■■■■■ 4.69
PMS2P3-201ENST00000394921 NCAPD3P42695 1498 aa44.32■■■■■ 4.69
PMS2P3-201ENST00000394921 ATAD2BQ9ULI0 1458 aa44.27■■■■■ 4.68
PMS2P3-201ENST00000394921 BAZ1AQ9NRL2 1556 aaPredicted RBP44.18■■■■■ 4.66
PMS2P3-201ENST00000394921 SMARCA2P51531 1590 aa44.14■■■■■ 4.66
PMS2P3-201ENST00000394921 HMGXB3Q12766 1538 aa44.04■■■■■ 4.64
PMS2P3-201ENST00000394921 MROH2BQ7Z745 1585 aa43.93■■■■■ 4.62
PMS2P3-201ENST00000394921 PEG3Q9GZU2 1588 aa43.93■■■■■ 4.62
PMS2P3-201ENST00000394921 BAZ1BQ9UIG0 1483 aaKnown RBP43.83■■■■■ 4.61
PMS2P3-201ENST00000394921 NESP48681 1621 aa43.47■■■■■ 4.55
PMS2P3-201ENST00000394921 WIZO95785 1651 aa43.43■■■■■ 4.54
PMS2P3-201ENST00000394921 ERCC6Q03468 1493 aa43.42■■■■■ 4.54
PMS2P3-201ENST00000394921 LAMC3Q9Y6N6 1575 aa43.22■■■■■ 4.51
PMS2P3-201ENST00000394921 RSF1Q96T23 1441 aaPredicted RBP43.21■■■■■ 4.51
PMS2P3-201ENST00000394921 CUX2O14529 1486 aa43.21■■■■■ 4.51
PMS2P3-201ENST00000394921 CADPSQ9ULU8 1353 aa42.98■■■■■ 4.47
PMS2P3-201ENST00000394921 THOC2Q8NI27 1593 aaKnown RBP42.93■■■■■ 4.46
PMS2P3-201ENST00000394921 PDS5BQ9NTI5 1447 aa42.93■■■■■ 4.46
PMS2P3-201ENST00000394921 KIF21AQ7Z4S6 1674 aa42.92■■■■■ 4.46
PMS2P3-201ENST00000394921 TOP2AP11388 1531 aaKnown RBP42.91■■■■■ 4.46
PMS2P3-201ENST00000394921 CFTRP13569 1480 aa42.62■■■■■ 4.41
PMS2P3-201ENST00000394921 DNAJC5Q9H3Z4 198 aa42.6■■■■■ 4.41
PMS2P3-201ENST00000394921 MRC2Q9UBG0 1479 aa42.55■■■■■ 4.4
PMS2P3-201ENST00000394921 FANCD2Q9BXW9 1451 aa42.49■■■■■ 4.39
PMS2P3-201ENST00000394921 CEP164Q9UPV0 1460 aa42.47■■■■■ 4.39
PMS2P3-201ENST00000394921 WDR62O43379 1518 aa42.45■■■■■ 4.39
PMS2P3-201ENST00000394921 CCDC88BA6NC98 1476 aa42.42■■■■■ 4.38
PMS2P3-201ENST00000394921 PRDM2Q13029 1718 aa42.25■■■■■ 4.35
PMS2P3-201ENST00000394921 URB2Q14146 1524 aaKnown RBP42.14■■■■■ 4.34
PMS2P3-201ENST00000394921 TOPBP1Q92547 1522 aa41.76■■■■■ 4.28
PMS2P3-201ENST00000394921 ABCC8Q09428 1581 aa41.67■■■■■ 4.26
PMS2P3-201ENST00000394921 DNMBPQ6XZF7 1577 aa41.65■■■■■ 4.26
PMS2P3-201ENST00000394921 IFT140Q96RY7 1462 aa41.62■■■■■ 4.25
PMS2P3-201ENST00000394921 SUPT5HO00267 1087 aaKnown RBP41.62■■■■■ 4.25
PMS2P3-201ENST00000394921 ZNF608Q9ULD9 1512 aaPredicted RBP41.53■■■■■ 4.24
PMS2P3-201ENST00000394921 TARBP1Q13395 1621 aaKnown RBP41.37■■■■■ 4.21
PMS2P3-201ENST00000394921 POLA1P09884 1462 aaPredicted RBP41.37■■■■■ 4.21
PMS2P3-201ENST00000394921 EIF4G3O43432 1585 aaKnown RBP41.32■■■■■ 4.2
PMS2P3-201ENST00000394921 OSCARQ8IYS5 282 aa41.29■■■■■ 4.2
PMS2P3-201ENST00000394921 CUX1P39880 1505 aa41.25■■■■■ 4.19
PMS2P3-201ENST00000394921 RAD54L2Q9Y4B4 1467 aa41.22■■■■■ 4.19
PMS2P3-201ENST00000394921 AQRO60306 1485 aaKnown RBP eCLIP41.2■■■■■ 4.191e-6■■■■■ 43.9
PMS2P3-201ENST00000394921 FGD5Q6ZNL6 1462 aa41.18■■■■■ 4.18
PMS2P3-201ENST00000394921 SOGA1O94964 1423 aa41.16■■■■■ 4.18
PMS2P3-201ENST00000394921 TDRD9Q8NDG6 1382 aaKnown RBP41.03■■■■■ 4.16
PMS2P3-201ENST00000394921 WDR97A6NE52 1622 aa40.96■■■■■ 4.15
PMS2P3-201ENST00000394921 CHD1O14646 1710 aa40.92■■■■■ 4.14
PMS2P3-201ENST00000394921 TRIM41Q8WV44 630 aa40.89■■■■■ 4.14
PMS2P3-201ENST00000394921 SNAPC4Q5SXM2 1469 aa40.8■■■■■ 4.12
PMS2P3-201ENST00000394921 ABCA10Q8WWZ4 1543 aa40.76■■■■■ 4.12
PMS2P3-201ENST00000394921 RIMBP3CA6NJZ7 1639 aa40.76■■■■■ 4.11
PMS2P3-201ENST00000394921 RIMBP3BA6NNM3 1639 aa40.76■■■■■ 4.11
PMS2P3-201ENST00000394921 RIMBP3Q9UFD9 1639 aa40.76■■■■■ 4.11
PMS2P3-201ENST00000394921 FBLN2P98095 1184 aa40.75■■■■■ 4.11
PMS2P3-201ENST00000394921 GRIN2BQ13224 1484 aa40.75■■■■■ 4.11
PMS2P3-201ENST00000394921 BIVM-ERCC5R4GMW8 1640 aa40.73■■■■■ 4.11
PMS2P3-201ENST00000394921 WRNQ14191 1432 aaPredicted RBP eCLIP40.72■■■■■ 4.11
PMS2P3-201ENST00000394921 TOP2BQ02880 1626 aa40.72■■■■■ 4.11
PMS2P3-201ENST00000394921 MAGI1Q96QZ7 1491 aaPredicted RBP40.71■■■■■ 4.11
PMS2P3-201ENST00000394921 SYNJ1O43426 1573 aa40.7■■■■■ 4.11
PMS2P3-201ENST00000394921 ARHGEF11O15085 1522 aa40.68■■■■■ 4.1
PMS2P3-201ENST00000394921 GAPVD1Q14C86 1478 aa40.67■■■■■ 4.1
PMS2P3-201ENST00000394921 ABCA5Q8WWZ7 1642 aa40.66■■■■■ 4.1
PMS2P3-201ENST00000394921 PBRM1Q86U86 1689 aa40.65■■■■■ 4.1
PMS2P3-201ENST00000394921 CHMP7Q8WUX9 453 aaPredicted RBP40.56■■■■■ 4.08
PMS2P3-201ENST00000394921 SYNJ2O15056 1496 aa40.56■■■■■ 4.08
PMS2P3-201ENST00000394921 CLASP1Q7Z460 1538 aa40.48■■■■■ 4.07
PMS2P3-201ENST00000394921 ARAP1Q96P48 1450 aa40.33■■■■■ 4.05
PMS2P3-201ENST00000394921 ADAMTS12P58397 1594 aa40.3■■■■■ 4.04
PMS2P3-201ENST00000394921 CYB5RLQ6IPT4 315 aa40.3■■■■■ 4.04
PMS2P3-201ENST00000394921 GRIN2AQ12879 1464 aa40.24■■■■■ 4.03
PMS2P3-201ENST00000394921 ERICH3Q5RHP9 1530 aa40.23■■■■■ 4.03
PMS2P3-201ENST00000394921 FHAD1B1AJZ9 1412 aa40.19■■■■■ 4.02
PMS2P3-201ENST00000394921 NUP160Q12769 1436 aa40.1■■■■■ 4.01
PMS2P3-201ENST00000394921 CEP170Q5SW79 1584 aa40.09■■■■■ 4.01
PMS2P3-201ENST00000394921 ERCC6L2Q5T890 1561 aa39.9■■■■□ 3.98
PMS2P3-201ENST00000394921 KIF27Q86VH2 1401 aa39.9■■■■□ 3.98
PMS2P3-201ENST00000394921 SHROOM2Q13796 1616 aa39.88■■■■□ 3.97
PMS2P3-201ENST00000394921 IGF1RP08069 1367 aa39.86■■■■□ 3.97
PMS2P3-201ENST00000394921 CUL7Q14999 1698 aa39.74■■■■□ 3.95
PMS2P3-201ENST00000394921 RUSC2Q8N2Y8 1516 aa39.72■■■■□ 3.95
PMS2P3-201ENST00000394921 JPH4Q96JJ6 628 aa39.65■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms