RNA–Protein interactions for RNA: ENST00000394571.3

PNPLA1-203, Transcript of patatin like phospholipase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best)

Gene PNPLA1, Length 1,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA1-203ENST00000394571 NISCHQ9Y2I1 1504 aa39.49■■■■□ 3.91
PNPLA1-203ENST00000394571 ABCC9O60706 1549 aa35.37■■■■□ 3.25
PNPLA1-203ENST00000394571 CCDC180Q9P1Z9 1646 aa35.24■■■■□ 3.23
PNPLA1-203ENST00000394571 RB1CC1Q8TDY2 1594 aa33.57■■■□□ 2.96
PNPLA1-203ENST00000394571 DCAF8L2P0C7V8 631 aa33.49■■■□□ 2.95
PNPLA1-203ENST00000394571 NACADO15069 1562 aa33.34■■■□□ 2.93
PNPLA1-203ENST00000394571 DNAJC5BQ9UF47 199 aa33.16■■■□□ 2.9
PNPLA1-203ENST00000394571 PABPN1Q86U42 306 aaKnown RBP eCLIP33.04■■■□□ 2.88
PNPLA1-203ENST00000394571 MYO15BQ96JP2 1530 aa32.87■■■□□ 2.85
PNPLA1-203ENST00000394571 UNC13AQ9UPW8 1703 aa32.77■■■□□ 2.84
PNPLA1-203ENST00000394571 ZCCHC6Q5VYS8 1495 aaKnown RBP32.74■■■□□ 2.83
PNPLA1-203ENST00000394571 BICRAQ9NZM4 1560 aa32.64■■■□□ 2.82
PNPLA1-203ENST00000394571 DCAF1Q9Y4B6 1507 aa32.51■■■□□ 2.8
PNPLA1-203ENST00000394571 SCRIBQ14160 1630 aa32.31■■■□□ 2.76
PNPLA1-203ENST00000394571 SHROOM4Q9ULL8 1493 aa32.06■■■□□ 2.72
PNPLA1-203ENST00000394571 CC2D2AQ9P2K1 1620 aa31.87■■■□□ 2.69
PNPLA1-203ENST00000394571 EIF4G1Q04637 1599 aaKnown RBP31.82■■■□□ 2.68
PNPLA1-203ENST00000394571 CECR2Q9BXF3 1484 aa31.8■■■□□ 2.68
PNPLA1-203ENST00000394571 NCAPD3P42695 1498 aa30.83■■■□□ 2.53
PNPLA1-203ENST00000394571 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
PNPLA1-203ENST00000394571 SMARCA4P51532 1647 aa30.75■■■□□ 2.51
PNPLA1-203ENST00000394571 SMARCA2P51531 1590 aa30.64■■■□□ 2.5
PNPLA1-203ENST00000394571 BAZ1AQ9NRL2 1556 aaPredicted RBP30.6■■■□□ 2.49
PNPLA1-203ENST00000394571 HMGXB3Q12766 1538 aa30.57■■■□□ 2.48
PNPLA1-203ENST00000394571 BAZ1BQ9UIG0 1483 aaKnown RBP30.5■■■□□ 2.47
PNPLA1-203ENST00000394571 MROH2BQ7Z745 1585 aa30.49■■■□□ 2.47
PNPLA1-203ENST00000394571 ERCC6Q03468 1493 aa30.49■■■□□ 2.47
PNPLA1-203ENST00000394571 NESP48681 1621 aa30.44■■■□□ 2.46
PNPLA1-203ENST00000394571 PEG3Q9GZU2 1588 aa30.39■■■□□ 2.46
PNPLA1-203ENST00000394571 CUX2O14529 1486 aa30.29■■■□□ 2.44
PNPLA1-203ENST00000394571 DNAJC5Q9H3Z4 198 aa30.24■■■□□ 2.43
PNPLA1-203ENST00000394571 WIZO95785 1651 aa30.1■■■□□ 2.41
PNPLA1-203ENST00000394571 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
PNPLA1-203ENST00000394571 THOC2Q8NI27 1593 aaKnown RBP29.97■■■□□ 2.39
PNPLA1-203ENST00000394571 PDS5BQ9NTI5 1447 aa29.95■■■□□ 2.39
PNPLA1-203ENST00000394571 CADPSQ9ULU8 1353 aa29.94■■■□□ 2.38
PNPLA1-203ENST00000394571 KIF21AQ7Z4S6 1674 aa29.92■■■□□ 2.38
PNPLA1-203ENST00000394571 RSF1Q96T23 1441 aaPredicted RBP29.91■■■□□ 2.38
PNPLA1-203ENST00000394571 MRC2Q9UBG0 1479 aa29.7■■■□□ 2.34
PNPLA1-203ENST00000394571 TOP2AP11388 1531 aaKnown RBP29.69■■■□□ 2.34
PNPLA1-203ENST00000394571 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
PNPLA1-203ENST00000394571 CEP164Q9UPV0 1460 aa29.61■■■□□ 2.33
PNPLA1-203ENST00000394571 CFTRP13569 1480 aa29.6■■■□□ 2.33
PNPLA1-203ENST00000394571 WDR62O43379 1518 aa29.58■■■□□ 2.33
PNPLA1-203ENST00000394571 CCDC88BA6NC98 1476 aa29.42■■■□□ 2.3
PNPLA1-203ENST00000394571 URB2Q14146 1524 aaKnown RBP29.38■■■□□ 2.29
PNPLA1-203ENST00000394571 PRDM2Q13029 1718 aa29.15■■■□□ 2.26
PNPLA1-203ENST00000394571 TRIM41Q8WV44 630 aa29.09■■■□□ 2.25
PNPLA1-203ENST00000394571 TOPBP1Q92547 1522 aa29.06■■■□□ 2.24
PNPLA1-203ENST00000394571 ZNF608Q9ULD9 1512 aaPredicted RBP29.04■■■□□ 2.24
PNPLA1-203ENST00000394571 OSCARQ8IYS5 282 aa29.03■■■□□ 2.24
PNPLA1-203ENST00000394571 IFT140Q96RY7 1462 aa29■■■□□ 2.23
PNPLA1-203ENST00000394571 DNMBPQ6XZF7 1577 aa28.91■■■□□ 2.22
PNPLA1-203ENST00000394571 ABCC8Q09428 1581 aa28.9■■■□□ 2.22
PNPLA1-203ENST00000394571 SUPT5HO00267 1087 aaKnown RBP28.82■■■□□ 2.2
PNPLA1-203ENST00000394571 AQRO60306 1485 aaKnown RBP eCLIP28.8■■■□□ 2.2
PNPLA1-203ENST00000394571 EIF4G3O43432 1585 aaKnown RBP28.79■■■□□ 2.2
PNPLA1-203ENST00000394571 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
PNPLA1-203ENST00000394571 TARBP1Q13395 1621 aaKnown RBP28.75■■■□□ 2.19
PNPLA1-203ENST00000394571 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
PNPLA1-203ENST00000394571 SOGA1O94964 1423 aa28.68■■■□□ 2.18
PNPLA1-203ENST00000394571 TDRD9Q8NDG6 1382 aaKnown RBP28.67■■■□□ 2.18
PNPLA1-203ENST00000394571 FBLN2P98095 1184 aa28.64■■■□□ 2.18
PNPLA1-203ENST00000394571 FGD5Q6ZNL6 1462 aa28.63■■■□□ 2.17
PNPLA1-203ENST00000394571 CUX1P39880 1505 aa28.62■■■□□ 2.17
PNPLA1-203ENST00000394571 RIMBP3CA6NJZ7 1639 aa28.6■■■□□ 2.17
PNPLA1-203ENST00000394571 RIMBP3BA6NNM3 1639 aa28.6■■■□□ 2.17
PNPLA1-203ENST00000394571 RIMBP3Q9UFD9 1639 aa28.6■■■□□ 2.17
PNPLA1-203ENST00000394571 ARHGEF11O15085 1522 aa28.53■■■□□ 2.16
PNPLA1-203ENST00000394571 CHD1O14646 1710 aa28.53■■■□□ 2.16
PNPLA1-203ENST00000394571 SNAPC4Q5SXM2 1469 aa28.47■■■□□ 2.15
PNPLA1-203ENST00000394571 CYB5RLQ6IPT4 315 aa28.42■■■□□ 2.14
PNPLA1-203ENST00000394571 CHMP7Q8WUX9 453 aaPredicted RBP28.38■■■□□ 2.13
PNPLA1-203ENST00000394571 GRIN2BQ13224 1484 aa28.36■■■□□ 2.13
PNPLA1-203ENST00000394571 WDR97A6NE52 1622 aa28.33■■■□□ 2.13
PNPLA1-203ENST00000394571 MAGI1Q96QZ7 1491 aaPredicted RBP28.31■■■□□ 2.12
PNPLA1-203ENST00000394571 GAPVD1Q14C86 1478 aa28.3■■■□□ 2.12
PNPLA1-203ENST00000394571 ARAP1Q96P48 1450 aa28.28■■■□□ 2.12
PNPLA1-203ENST00000394571 ABCA10Q8WWZ4 1543 aa28.26■■■□□ 2.11
PNPLA1-203ENST00000394571 SYNJ2O15056 1496 aa28.25■■■□□ 2.11
PNPLA1-203ENST00000394571 CLASP1Q7Z460 1538 aa28.22■■■□□ 2.11
PNPLA1-203ENST00000394571 WRNQ14191 1432 aaPredicted RBP eCLIP28.2■■■□□ 2.11
PNPLA1-203ENST00000394571 SYNJ1O43426 1573 aa28.19■■■□□ 2.1
PNPLA1-203ENST00000394571 PBRM1Q86U86 1689 aa28.19■■■□□ 2.1
PNPLA1-203ENST00000394571 ABCA5Q8WWZ7 1642 aa28.19■■■□□ 2.1
PNPLA1-203ENST00000394571 TOP2BQ02880 1626 aa28.13■■■□□ 2.09
PNPLA1-203ENST00000394571 BIVM-ERCC5R4GMW8 1640 aa28.1■■■□□ 2.09
PNPLA1-203ENST00000394571 TRHP20396 242 aaPredicted RBP28.07■■■□□ 2.08
PNPLA1-203ENST00000394571 GRIN2AQ12879 1464 aa28■■■□□ 2.07
PNPLA1-203ENST00000394571 ADAMTS12P58397 1594 aa27.98■■■□□ 2.07
PNPLA1-203ENST00000394571 FHAD1B1AJZ9 1412 aa27.93■■■□□ 2.06
PNPLA1-203ENST00000394571 CEP170Q5SW79 1584 aa27.91■■■□□ 2.06
PNPLA1-203ENST00000394571 ERCC6L2Q5T890 1561 aa27.9■■■□□ 2.06
PNPLA1-203ENST00000394571 NUP160Q12769 1436 aa27.89■■■□□ 2.06
PNPLA1-203ENST00000394571 ERICH3Q5RHP9 1530 aa27.87■■■□□ 2.05
PNPLA1-203ENST00000394571 SHROOM2Q13796 1616 aa27.7■■■□□ 2.02
PNPLA1-203ENST00000394571 PRG4Q92954 1404 aaPredicted RBP27.68■■■□□ 2.02
PNPLA1-203ENST00000394571 JPH4Q96JJ6 628 aa27.68■■■□□ 2.02
PNPLA1-203ENST00000394571 IGF1RP08069 1367 aa27.65■■■□□ 2.02
PNPLA1-203ENST00000394571 KIF27Q86VH2 1401 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms