RNA–Protein interactions for RNA: ENST00000394251.2

MED20-202, Transcript of mediator complex subunit 20, humanhuman

TSL 4

Gene MED20, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED20-202ENST00000394251 NISCHQ9Y2I1 1504 aa38.99■■■■□ 3.83
MED20-202ENST00000394251 CCDC180Q9P1Z9 1646 aa34.98■■■■□ 3.19
MED20-202ENST00000394251 ABCC9O60706 1549 aa34.8■■■■□ 3.16
MED20-202ENST00000394251 RB1CC1Q8TDY2 1594 aa33.17■■■□□ 2.9
MED20-202ENST00000394251 NACADO15069 1562 aa32.97■■■□□ 2.87
MED20-202ENST00000394251 DCAF8L2P0C7V8 631 aa32.8■■■□□ 2.84
MED20-202ENST00000394251 UNC13AQ9UPW8 1703 aa32.62■■■□□ 2.81
MED20-202ENST00000394251 MYO15BQ96JP2 1530 aa32.53■■■□□ 2.8
MED20-202ENST00000394251 DNAJC5BQ9UF47 199 aa32.52■■■□□ 2.8
MED20-202ENST00000394251 PABPN1Q86U42 306 aaKnown RBP eCLIP32.4■■■□□ 2.78
MED20-202ENST00000394251 ZCCHC6Q5VYS8 1495 aaKnown RBP32.35■■■□□ 2.77
MED20-202ENST00000394251 BICRAQ9NZM4 1560 aa32.28■■■□□ 2.76
MED20-202ENST00000394251 DCAF1Q9Y4B6 1507 aa32.19■■■□□ 2.74
MED20-202ENST00000394251 SCRIBQ14160 1630 aa31.89■■■□□ 2.7
MED20-202ENST00000394251 SHROOM4Q9ULL8 1493 aa31.72■■■□□ 2.67
MED20-202ENST00000394251 CC2D2AQ9P2K1 1620 aa31.49■■■□□ 2.63
MED20-202ENST00000394251 EIF4G1Q04637 1599 aaKnown RBP31.43■■■□□ 2.62
MED20-202ENST00000394251 CECR2Q9BXF3 1484 aa31.3■■■□□ 2.6
MED20-202ENST00000394251 SMARCA4P51532 1647 aa30.43■■■□□ 2.46
MED20-202ENST00000394251 NCAPD3P42695 1498 aa30.41■■■□□ 2.46
MED20-202ENST00000394251 ATAD2BQ9ULI0 1458 aa30.37■■■□□ 2.45
MED20-202ENST00000394251 SMARCA2P51531 1590 aa30.28■■■□□ 2.44
MED20-202ENST00000394251 BAZ1AQ9NRL2 1556 aaPredicted RBP30.24■■■□□ 2.43
MED20-202ENST00000394251 HMGXB3Q12766 1538 aa30.23■■■□□ 2.43
MED20-202ENST00000394251 PEG3Q9GZU2 1588 aa30.1■■■□□ 2.41
MED20-202ENST00000394251 MROH2BQ7Z745 1585 aa30.08■■■□□ 2.41
MED20-202ENST00000394251 BAZ1BQ9UIG0 1483 aaKnown RBP30.07■■■□□ 2.4
MED20-202ENST00000394251 ERCC6Q03468 1493 aa29.99■■■□□ 2.39
MED20-202ENST00000394251 NESP48681 1621 aa29.97■■■□□ 2.39
MED20-202ENST00000394251 CUX2O14529 1486 aa29.88■■■□□ 2.37
MED20-202ENST00000394251 WIZO95785 1651 aa29.79■■■□□ 2.36
MED20-202ENST00000394251 LAMC3Q9Y6N6 1575 aa29.75■■■□□ 2.35
MED20-202ENST00000394251 DNAJC5Q9H3Z4 198 aa29.69■■■□□ 2.34
MED20-202ENST00000394251 KIF21AQ7Z4S6 1674 aa29.66■■■□□ 2.34
MED20-202ENST00000394251 THOC2Q8NI27 1593 aaKnown RBP29.66■■■□□ 2.34
MED20-202ENST00000394251 PDS5BQ9NTI5 1447 aa29.5■■■□□ 2.31
MED20-202ENST00000394251 CADPSQ9ULU8 1353 aa29.49■■■□□ 2.31
MED20-202ENST00000394251 RSF1Q96T23 1441 aaPredicted RBP29.46■■■□□ 2.31
MED20-202ENST00000394251 TOP2AP11388 1531 aaKnown RBP29.34■■■□□ 2.29
MED20-202ENST00000394251 MRC2Q9UBG0 1479 aa29.28■■■□□ 2.28
MED20-202ENST00000394251 WDR62O43379 1518 aa29.24■■■□□ 2.27
MED20-202ENST00000394251 CFTRP13569 1480 aa29.2■■■□□ 2.26
MED20-202ENST00000394251 CEP164Q9UPV0 1460 aa29.19■■■□□ 2.26
MED20-202ENST00000394251 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
MED20-202ENST00000394251 PRDM2Q13029 1718 aa29.08■■■□□ 2.25
MED20-202ENST00000394251 CCDC88BA6NC98 1476 aa29■■■□□ 2.23
MED20-202ENST00000394251 URB2Q14146 1524 aaKnown RBP28.97■■■□□ 2.23
MED20-202ENST00000394251 TOPBP1Q92547 1522 aa28.67■■■□□ 2.18
MED20-202ENST00000394251 ZNF608Q9ULD9 1512 aaPredicted RBP28.59■■■□□ 2.17
MED20-202ENST00000394251 IFT140Q96RY7 1462 aa28.59■■■□□ 2.17
MED20-202ENST00000394251 DNMBPQ6XZF7 1577 aa28.58■■■□□ 2.17
MED20-202ENST00000394251 ABCC8Q09428 1581 aa28.55■■■□□ 2.16
MED20-202ENST00000394251 OSCARQ8IYS5 282 aa28.51■■■□□ 2.15
MED20-202ENST00000394251 EIF4G3O43432 1585 aaKnown RBP28.47■■■□□ 2.15
MED20-202ENST00000394251 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
MED20-202ENST00000394251 TARBP1Q13395 1621 aaKnown RBP28.45■■■□□ 2.14
MED20-202ENST00000394251 POLA1P09884 1462 aaPredicted RBP28.37■■■□□ 2.13
MED20-202ENST00000394251 AQRO60306 1485 aaKnown RBP eCLIP28.33■■■□□ 2.13
MED20-202ENST00000394251 CHD1O14646 1710 aa28.29■■■□□ 2.12
MED20-202ENST00000394251 RAD54L2Q9Y4B4 1467 aa28.29■■■□□ 2.12
MED20-202ENST00000394251 RIMBP3CA6NJZ7 1639 aa28.25■■■□□ 2.11
MED20-202ENST00000394251 RIMBP3BA6NNM3 1639 aa28.25■■■□□ 2.11
MED20-202ENST00000394251 RIMBP3Q9UFD9 1639 aa28.25■■■□□ 2.11
MED20-202ENST00000394251 CUX1P39880 1505 aa28.25■■■□□ 2.11
MED20-202ENST00000394251 SUPT5HO00267 1087 aaKnown RBP28.25■■■□□ 2.11
MED20-202ENST00000394251 FGD5Q6ZNL6 1462 aa28.23■■■□□ 2.11
MED20-202ENST00000394251 SOGA1O94964 1423 aa28.22■■■□□ 2.11
MED20-202ENST00000394251 TDRD9Q8NDG6 1382 aaKnown RBP28.15■■■□□ 2.1
MED20-202ENST00000394251 ARHGEF11O15085 1522 aa28.13■■■□□ 2.09
MED20-202ENST00000394251 WDR97A6NE52 1622 aa28.11■■■□□ 2.09
MED20-202ENST00000394251 FBLN2P98095 1184 aa28.06■■■□□ 2.08
MED20-202ENST00000394251 SNAPC4Q5SXM2 1469 aa28.05■■■□□ 2.08
MED20-202ENST00000394251 PBRM1Q86U86 1689 aa28■■■□□ 2.07
MED20-202ENST00000394251 GRIN2BQ13224 1484 aa27.95■■■□□ 2.07
MED20-202ENST00000394251 MAGI1Q96QZ7 1491 aaPredicted RBP27.94■■■□□ 2.06
MED20-202ENST00000394251 ABCA5Q8WWZ7 1642 aa27.9■■■□□ 2.06
MED20-202ENST00000394251 GAPVD1Q14C86 1478 aa27.89■■■□□ 2.06
MED20-202ENST00000394251 CLASP1Q7Z460 1538 aa27.89■■■□□ 2.06
MED20-202ENST00000394251 ABCA10Q8WWZ4 1543 aa27.89■■■□□ 2.06
MED20-202ENST00000394251 BIVM-ERCC5R4GMW8 1640 aa27.88■■■□□ 2.05
MED20-202ENST00000394251 ARAP1Q96P48 1450 aa27.87■■■□□ 2.05
MED20-202ENST00000394251 CYB5RLQ6IPT4 315 aa27.86■■■□□ 2.05
MED20-202ENST00000394251 CHMP7Q8WUX9 453 aaPredicted RBP27.86■■■□□ 2.05
MED20-202ENST00000394251 SYNJ1O43426 1573 aa27.86■■■□□ 2.05
MED20-202ENST00000394251 SYNJ2O15056 1496 aa27.85■■■□□ 2.05
MED20-202ENST00000394251 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
MED20-202ENST00000394251 WRNQ14191 1432 aaPredicted RBP eCLIP27.77■■■□□ 2.04
MED20-202ENST00000394251 ADAMTS12P58397 1594 aa27.67■■■□□ 2.02
MED20-202ENST00000394251 GRIN2AQ12879 1464 aa27.62■■■□□ 2.01
MED20-202ENST00000394251 CEP170Q5SW79 1584 aa27.57■■■□□ 2
MED20-202ENST00000394251 ERICH3Q5RHP9 1530 aa27.55■■■□□ 2
MED20-202ENST00000394251 FHAD1B1AJZ9 1412 aa27.52■■■□□ 2
MED20-202ENST00000394251 ERCC6L2Q5T890 1561 aa27.52■■■□□ 2
MED20-202ENST00000394251 NUP160Q12769 1436 aa27.51■■□□□ 1.99
MED20-202ENST00000394251 TRHP20396 242 aaPredicted RBP27.49■■□□□ 1.99
MED20-202ENST00000394251 SHROOM2Q13796 1616 aa27.45■■□□□ 1.98
MED20-202ENST00000394251 RUSC2Q8N2Y8 1516 aa27.28■■□□□ 1.96
MED20-202ENST00000394251 PRG4Q92954 1404 aaPredicted RBP27.23■■□□□ 1.95
MED20-202ENST00000394251 CUL7Q14999 1698 aa27.22■■□□□ 1.95
MED20-202ENST00000394251 KIF27Q86VH2 1401 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms