RNA–Protein interactions for RNA: ENST00000393448.6

RUFY1-203, Transcript of RUN and FYVE domain containing 1, humanhuman

TSL 1 (best)

Gene RUFY1, Length 2,320 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-203ENST00000393448 NISCHQ9Y2I1 1504 aa39.02■■■■□ 3.84
RUFY1-203ENST00000393448 CCDC180Q9P1Z9 1646 aa33.76■■■□□ 2.99
RUFY1-203ENST00000393448 ZCCHC6Q5VYS8 1495 aaKnown RBP32.82■■■□□ 2.84
RUFY1-203ENST00000393448 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
RUFY1-203ENST00000393448 SHROOM4Q9ULL8 1493 aa32.34■■■□□ 2.77
RUFY1-203ENST00000393448 DCAF1Q9Y4B6 1507 aa32.09■■■□□ 2.73
RUFY1-203ENST00000393448 ABCC9O60706 1549 aa31.97■■■□□ 2.71
RUFY1-203ENST00000393448 MYO15BQ96JP2 1530 aa31.56■■■□□ 2.64
RUFY1-203ENST00000393448 NACADO15069 1562 aa31.4■■■□□ 2.62
RUFY1-203ENST00000393448 SCRIBQ14160 1630 aa31.34■■■□□ 2.61
RUFY1-203ENST00000393448 SUPT5HO00267 1087 aaKnown RBP31.22■■■□□ 2.59
RUFY1-203ENST00000393448 RB1CC1Q8TDY2 1594 aa31.11■■■□□ 2.57
RUFY1-203ENST00000393448 UNC13AQ9UPW8 1703 aa30.63■■■□□ 2.49
RUFY1-203ENST00000393448 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
RUFY1-203ENST00000393448 RSF1Q96T23 1441 aaPredicted RBP30.44■■■□□ 2.46
RUFY1-203ENST00000393448 PABPN1Q86U42 306 aaKnown RBP eCLIP30.29■■■□□ 2.44
RUFY1-203ENST00000393448 BICRAQ9NZM4 1560 aa30.27■■■□□ 2.44
RUFY1-203ENST00000393448 MROH2BQ7Z745 1585 aa30.25■■■□□ 2.43
RUFY1-203ENST00000393448 BAZ1AQ9NRL2 1556 aaPredicted RBP30.06■■■□□ 2.4
RUFY1-203ENST00000393448 WIZO95785 1651 aa30.04■■■□□ 2.4
RUFY1-203ENST00000393448 SMARCA4P51532 1647 aa29.95■■■□□ 2.38
RUFY1-203ENST00000393448 CHIC1Q5VXU3 224 aa29.91■■■□□ 2.38
RUFY1-203ENST00000393448 TOP2AP11388 1531 aaKnown RBP29.6■■■□□ 2.33
RUFY1-203ENST00000393448 PEG3Q9GZU2 1588 aa29.46■■■□□ 2.31
RUFY1-203ENST00000393448 CCDC88BA6NC98 1476 aa29.39■■■□□ 2.3
RUFY1-203ENST00000393448 ATAD2BQ9ULI0 1458 aa29.39■■■□□ 2.3
RUFY1-203ENST00000393448 SMARCA2P51531 1590 aa29.39■■■□□ 2.3
RUFY1-203ENST00000393448 EIF4G1Q04637 1599 aaKnown RBP29.32■■■□□ 2.28
RUFY1-203ENST00000393448 BAZ1BQ9UIG0 1483 aaKnown RBP29.25■■■□□ 2.27
RUFY1-203ENST00000393448 TRIM41Q8WV44 630 aa29.21■■■□□ 2.27
RUFY1-203ENST00000393448 NCAPD3P42695 1498 aa29.02■■■□□ 2.24
RUFY1-203ENST00000393448 HMGXB3Q12766 1538 aa28.98■■■□□ 2.23
RUFY1-203ENST00000393448 ABCC8Q09428 1581 aa28.97■■■□□ 2.23
RUFY1-203ENST00000393448 LOC105371045A0A1W2PR82 267 aa28.93■■■□□ 2.22
RUFY1-203ENST00000393448 FAM9AQ8IZU1 332 aaPredicted RBP28.86■■■□□ 2.21
RUFY1-203ENST00000393448 CC2D2AQ9P2K1 1620 aa28.85■■■□□ 2.21
RUFY1-203ENST00000393448 WRNQ14191 1432 aaPredicted RBP eCLIP28.62■■■□□ 2.17
RUFY1-203ENST00000393448 EHMT2Q96KQ7 1210 aa28.59■■■□□ 2.17
RUFY1-203ENST00000393448 SYNJ1O43426 1573 aa28.54■■■□□ 2.16
RUFY1-203ENST00000393448 CFTRP13569 1480 aa28.49■■■□□ 2.15
RUFY1-203ENST00000393448 SOGA1O94964 1423 aa28.47■■■□□ 2.15
RUFY1-203ENST00000393448 RUSC2Q8N2Y8 1516 aa28.39■■■□□ 2.13
RUFY1-203ENST00000393448 CADPSQ9ULU8 1353 aa28.35■■■□□ 2.13
RUFY1-203ENST00000393448 PRDM2Q13029 1718 aa28.31■■■□□ 2.12
RUFY1-203ENST00000393448 TOP2BQ02880 1626 aa28.31■■■□□ 2.12
RUFY1-203ENST00000393448 DNAJC5BQ9UF47 199 aa28.29■■■□□ 2.12
RUFY1-203ENST00000393448 BIVM-ERCC5R4GMW8 1640 aa28.26■■■□□ 2.11
RUFY1-203ENST00000393448 CUX1P39880 1505 aa28.24■■■□□ 2.11
RUFY1-203ENST00000393448 EEA1Q15075 1411 aa28.2■■■□□ 2.11
RUFY1-203ENST00000393448 CSRNP3Q8WYN3 585 aa28.2■■■□□ 2.1
RUFY1-203ENST00000393448 NESP48681 1621 aa28.18■■■□□ 2.1
RUFY1-203ENST00000393448 FANCD2Q9BXW9 1451 aa28.08■■■□□ 2.09
RUFY1-203ENST00000393448 LAMC3Q9Y6N6 1575 aa27.98■■■□□ 2.07
RUFY1-203ENST00000393448 UBTFP17480 764 aaKnown RBP27.96■■■□□ 2.07
RUFY1-203ENST00000393448 GOLGA3Q08378 1498 aa27.95■■■□□ 2.06
RUFY1-203ENST00000393448 CEP164Q9UPV0 1460 aa27.91■■■□□ 2.06
RUFY1-203ENST00000393448 KIF21BO75037 1637 aa27.9■■■□□ 2.06
RUFY1-203ENST00000393448 TNIKQ9UKE5 1360 aa27.9■■■□□ 2.06
RUFY1-203ENST00000393448 FGD5Q6ZNL6 1462 aa27.89■■■□□ 2.05
RUFY1-203ENST00000393448 PCGF6Q9BYE7 350 aa27.87■■■□□ 2.05
RUFY1-203ENST00000393448 CEP162Q5TB80 1403 aa27.86■■■□□ 2.05
RUFY1-203ENST00000393448 RAPGEF2Q9Y4G8 1499 aa27.84■■■□□ 2.05
RUFY1-203ENST00000393448 KIF27Q86VH2 1401 aa27.83■■■□□ 2.05
RUFY1-203ENST00000393448 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
RUFY1-203ENST00000393448 TOPBP1Q92547 1522 aa27.8■■■□□ 2.04
RUFY1-203ENST00000393448 PDS5BQ9NTI5 1447 aa27.78■■■□□ 2.04
RUFY1-203ENST00000393448 CUX2O14529 1486 aa27.77■■■□□ 2.04
RUFY1-203ENST00000393448 KIF21AQ7Z4S6 1674 aa27.77■■■□□ 2.04
RUFY1-203ENST00000393448 URB2Q14146 1524 aaKnown RBP27.74■■■□□ 2.03
RUFY1-203ENST00000393448 PRXQ9BXM0 1461 aa27.72■■■□□ 2.03
RUFY1-203ENST00000393448 POLA1P09884 1462 aaPredicted RBP27.71■■■□□ 2.03
RUFY1-203ENST00000393448 RAD54L2Q9Y4B4 1467 aa27.71■■■□□ 2.03
RUFY1-203ENST00000393448 PPARGC1BQ86YN6 1023 aaKnown RBP27.66■■■□□ 2.02
RUFY1-203ENST00000393448 ERICH3Q5RHP9 1530 aa27.64■■■□□ 2.01
RUFY1-203ENST00000393448 TRIM26Q12899 539 aaPredicted RBP27.63■■■□□ 2.01
RUFY1-203ENST00000393448 RANGAP1P46060 587 aaPredicted RBP27.62■■■□□ 2.01
RUFY1-203ENST00000393448 IGF1RP08069 1367 aa27.61■■■□□ 2.01
RUFY1-203ENST00000393448 CLIP1P30622 1438 aa27.57■■■□□ 2
RUFY1-203ENST00000393448 ABCA10Q8WWZ4 1543 aa27.56■■■□□ 2
RUFY1-203ENST00000393448 CARMIL1Q5VZK9 1371 aa27.47■■□□□ 1.99
RUFY1-203ENST00000393448 WDR97A6NE52 1622 aa27.46■■□□□ 1.99
RUFY1-203ENST00000393448 MRC2Q9UBG0 1479 aa27.43■■□□□ 1.98
RUFY1-203ENST00000393448 TDRD9Q8NDG6 1382 aaKnown RBP27.42■■□□□ 1.98
RUFY1-203ENST00000393448 TTBK1Q5TCY1 1321 aaPredicted RBP27.4■■□□□ 1.98
RUFY1-203ENST00000393448 TARBP1Q13395 1621 aaKnown RBP27.35■■□□□ 1.97
RUFY1-203ENST00000393448 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
RUFY1-203ENST00000393448 VPS8Q8N3P4 1428 aa27.32■■□□□ 1.96
RUFY1-203ENST00000393448 ERCC6Q03468 1493 aa27.31■■□□□ 1.96
RUFY1-203ENST00000393448 GAPVD1Q14C86 1478 aa27.3■■□□□ 1.96
RUFY1-203ENST00000393448 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
RUFY1-203ENST00000393448 CUL7Q14999 1698 aa27.27■■□□□ 1.96
RUFY1-203ENST00000393448 WDR62O43379 1518 aa27.26■■□□□ 1.95
RUFY1-203ENST00000393448 ARHGAP35Q9NRY4 1499 aa27.21■■□□□ 1.95
RUFY1-203ENST00000393448 AQRO60306 1485 aaKnown RBP eCLIP27.19■■□□□ 1.944e-6■■■■■ 27.7
RUFY1-203ENST00000393448 HRCP23327 699 aa27.17■■□□□ 1.94
RUFY1-203ENST00000393448 THOC2Q8NI27 1593 aaKnown RBP27.16■■□□□ 1.94
RUFY1-203ENST00000393448 PBRM1Q86U86 1689 aa27.12■■□□□ 1.93
RUFY1-203ENST00000393448 ZNF608Q9ULD9 1512 aaPredicted RBP27.12■■□□□ 1.93
RUFY1-203ENST00000393448 IFT140Q96RY7 1462 aa27.11■■□□□ 1.93
RUFY1-203ENST00000393448 APLP2Q06481 763 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms