RNA–Protein interactions for RNA: ENST00000393400.6

TPRA1-203, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 1 (best)

Gene TPRA1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-203ENST00000393400 NISCHQ9Y2I1 1504 aa60.8■■■■■ 7.32
TPRA1-203ENST00000393400 CCDC180Q9P1Z9 1646 aa52.71■■■■■ 6.03
TPRA1-203ENST00000393400 ZCCHC6Q5VYS8 1495 aaKnown RBP51.25■■■■■ 5.79
TPRA1-203ENST00000393400 DCAF1Q9Y4B6 1507 aa50.36■■■■■ 5.65
TPRA1-203ENST00000393400 SHROOM4Q9ULL8 1493 aa49.94■■■■■ 5.59
TPRA1-203ENST00000393400 DCAF8L2P0C7V8 631 aa49.76■■■■■ 5.56
TPRA1-203ENST00000393400 MYO15BQ96JP2 1530 aa49.51■■■■■ 5.52
TPRA1-203ENST00000393400 ABCC9O60706 1549 aa49.03■■■■■ 5.44
TPRA1-203ENST00000393400 NACADO15069 1562 aa48.9■■■■■ 5.42
TPRA1-203ENST00000393400 SCRIBQ14160 1630 aa48.46■■■■■ 5.35
TPRA1-203ENST00000393400 SUPT5HO00267 1087 aaKnown RBP48.44■■■■■ 5.34
TPRA1-203ENST00000393400 RB1CC1Q8TDY2 1594 aa48.27■■■■■ 5.32
TPRA1-203ENST00000393400 RSF1Q96T23 1441 aaPredicted RBP47.44■■■■■ 5.18
TPRA1-203ENST00000393400 UNC13AQ9UPW8 1703 aa47.31■■■■■ 5.16
TPRA1-203ENST00000393400 CECR2Q9BXF3 1484 aa47.13■■■■■ 5.14
TPRA1-203ENST00000393400 MROH2BQ7Z745 1585 aa46.97■■■■■ 5.11
TPRA1-203ENST00000393400 BAZ1AQ9NRL2 1556 aaPredicted RBP46.89■■■■■ 5.1
TPRA1-203ENST00000393400 CHIC1Q5VXU3 224 aa46.86■■■■■ 5.09
TPRA1-203ENST00000393400 BICRAQ9NZM4 1560 aa46.82■■■■■ 5.09
TPRA1-203ENST00000393400 WIZO95785 1651 aa46.61■■■■■ 5.05
TPRA1-203ENST00000393400 SMARCA4P51532 1647 aa46.57■■■■■ 5.05
TPRA1-203ENST00000393400 PABPN1Q86U42 306 aaKnown RBP eCLIP46.35■■■■■ 5.01
TPRA1-203ENST00000393400 TOP2AP11388 1531 aaKnown RBP46.2■■■■■ 4.99
TPRA1-203ENST00000393400 PEG3Q9GZU2 1588 aa46.04■■■■■ 4.96
TPRA1-203ENST00000393400 SMARCA2P51531 1590 aa45.78■■■■■ 4.92
TPRA1-203ENST00000393400 EIF4G1Q04637 1599 aaKnown RBP45.75■■■■■ 4.91
TPRA1-203ENST00000393400 CCDC88BA6NC98 1476 aa45.71■■■■■ 4.91
TPRA1-203ENST00000393400 ATAD2BQ9ULI0 1458 aa45.62■■■■■ 4.89
TPRA1-203ENST00000393400 TRIM41Q8WV44 630 aa45.55■■■■■ 4.88
TPRA1-203ENST00000393400 BAZ1BQ9UIG0 1483 aaKnown RBP45.38■■■■■ 4.85
TPRA1-203ENST00000393400 HMGXB3Q12766 1538 aa45.15■■■■■ 4.82
TPRA1-203ENST00000393400 NCAPD3P42695 1498 aa45.14■■■■■ 4.82
TPRA1-203ENST00000393400 LOC105371045A0A1W2PR82 267 aa45.02■■■■■ 4.8
TPRA1-203ENST00000393400 ABCC8Q09428 1581 aa44.93■■■■■ 4.78
TPRA1-203ENST00000393400 FAM9AQ8IZU1 332 aaPredicted RBP44.64■■■■■ 4.74
TPRA1-203ENST00000393400 WRNQ14191 1432 aaPredicted RBP eCLIP44.62■■■■■ 4.73
TPRA1-203ENST00000393400 EEA1Q15075 1411 aa44.45■■■■■ 4.71
TPRA1-203ENST00000393400 CC2D2AQ9P2K1 1620 aa44.44■■■■■ 4.71
TPRA1-203ENST00000393400 SYNJ1O43426 1573 aa44.4■■■■■ 4.7
TPRA1-203ENST00000393400 CFTRP13569 1480 aa44.33■■■■■ 4.69
TPRA1-203ENST00000393400 SOGA1O94964 1423 aa44.27■■■■■ 4.68
TPRA1-203ENST00000393400 TOP2BQ02880 1626 aa44.2■■■■■ 4.67
TPRA1-203ENST00000393400 PRDM2Q13029 1718 aa44.16■■■■■ 4.66
TPRA1-203ENST00000393400 BIVM-ERCC5R4GMW8 1640 aa44.16■■■■■ 4.66
TPRA1-203ENST00000393400 CSRNP3Q8WYN3 585 aa44.04■■■■■ 4.64
TPRA1-203ENST00000393400 RUSC2Q8N2Y8 1516 aa44.04■■■■■ 4.64
TPRA1-203ENST00000393400 CADPSQ9ULU8 1353 aa43.99■■■■■ 4.63
TPRA1-203ENST00000393400 EHMT2Q96KQ7 1210 aa43.89■■■■■ 4.62
TPRA1-203ENST00000393400 CUX1P39880 1505 aa43.88■■■■■ 4.61
TPRA1-203ENST00000393400 TNIKQ9UKE5 1360 aa43.84■■■■■ 4.61
TPRA1-203ENST00000393400 GOLGA3Q08378 1498 aa43.81■■■■■ 4.6
TPRA1-203ENST00000393400 KIF21BO75037 1637 aa43.81■■■■■ 4.6
TPRA1-203ENST00000393400 CEP164Q9UPV0 1460 aa43.75■■■■■ 4.59
TPRA1-203ENST00000393400 PCGF6Q9BYE7 350 aa43.73■■■■■ 4.59
TPRA1-203ENST00000393400 TRIM26Q12899 539 aaPredicted RBP43.65■■■■■ 4.58
TPRA1-203ENST00000393400 CEP162Q5TB80 1403 aa43.61■■■■■ 4.57
TPRA1-203ENST00000393400 FANCD2Q9BXW9 1451 aa43.49■■■■■ 4.55
TPRA1-203ENST00000393400 UBTFP17480 764 aaKnown RBP43.47■■■■■ 4.55
TPRA1-203ENST00000393400 LAMC3Q9Y6N6 1575 aa43.46■■■■■ 4.55
TPRA1-203ENST00000393400 KIF27Q86VH2 1401 aa43.43■■■■■ 4.54
TPRA1-203ENST00000393400 ERICH3Q5RHP9 1530 aa43.39■■■■■ 4.54
TPRA1-203ENST00000393400 PRXQ9BXM0 1461 aa43.37■■■■■ 4.53
TPRA1-203ENST00000393400 RAPGEF2Q9Y4G8 1499 aa43.35■■■■■ 4.53
TPRA1-203ENST00000393400 NESP48681 1621 aa43.29■■■■■ 4.52
TPRA1-203ENST00000393400 DNMBPQ6XZF7 1577 aa43.28■■■■■ 4.52
TPRA1-203ENST00000393400 FGD5Q6ZNL6 1462 aa43.26■■■■■ 4.52
TPRA1-203ENST00000393400 HRCP23327 699 aa43.19■■■■■ 4.5
TPRA1-203ENST00000393400 TOPBP1Q92547 1522 aa43.12■■■■■ 4.49
TPRA1-203ENST00000393400 CUX2O14529 1486 aa43.11■■■■■ 4.49
TPRA1-203ENST00000393400 CLIP1P30622 1438 aa43.11■■■■■ 4.49
TPRA1-203ENST00000393400 PDS5BQ9NTI5 1447 aa43.08■■■■■ 4.49
TPRA1-203ENST00000393400 DNAJC5BQ9UF47 199 aa43■■■■■ 4.47
TPRA1-203ENST00000393400 IGF1RP08069 1367 aa42.97■■■■■ 4.47
TPRA1-203ENST00000393400 POLA1P09884 1462 aaPredicted RBP42.97■■■■■ 4.47
TPRA1-203ENST00000393400 ABCA10Q8WWZ4 1543 aa42.96■■■■■ 4.47
TPRA1-203ENST00000393400 URB2Q14146 1524 aaKnown RBP42.91■■■■■ 4.46
TPRA1-203ENST00000393400 VPS8Q8N3P4 1428 aa42.87■■■■■ 4.45
TPRA1-203ENST00000393400 KIF21AQ7Z4S6 1674 aa42.8■■■■■ 4.44
TPRA1-203ENST00000393400 RAD54L2Q9Y4B4 1467 aa42.79■■■■■ 4.44
TPRA1-203ENST00000393400 CARMIL1Q5VZK9 1371 aa42.76■■■■■ 4.44
TPRA1-203ENST00000393400 PPARGC1BQ86YN6 1023 aaKnown RBP42.75■■■■■ 4.43
TPRA1-203ENST00000393400 WDR97A6NE52 1622 aa42.75■■■■■ 4.43
TPRA1-203ENST00000393400 ARAP1Q96P48 1450 aa42.61■■■■■ 4.41
TPRA1-203ENST00000393400 CUL7Q14999 1698 aa42.61■■■■■ 4.41
TPRA1-203ENST00000393400 ABCA5Q8WWZ7 1642 aa42.54■■■■■ 4.4
TPRA1-203ENST00000393400 MRC2Q9UBG0 1479 aa42.48■■■■■ 4.39
TPRA1-203ENST00000393400 ARHGAP35Q9NRY4 1499 aa42.47■■■■■ 4.39
TPRA1-203ENST00000393400 TARBP1Q13395 1621 aaKnown RBP42.43■■■■■ 4.38
TPRA1-203ENST00000393400 RANGAP1P46060 587 aaPredicted RBP42.41■■■■■ 4.38
TPRA1-203ENST00000393400 APLP2Q06481 763 aa42.37■■■■■ 4.37
TPRA1-203ENST00000393400 GAPVD1Q14C86 1478 aa42.37■■■■■ 4.37
TPRA1-203ENST00000393400 ZEB1P37275 1124 aaPredicted RBP42.35■■■■■ 4.37
TPRA1-203ENST00000393400 TDRD9Q8NDG6 1382 aaKnown RBP42.28■■■■■ 4.36
TPRA1-203ENST00000393400 WDR62O43379 1518 aa42.25■■■■■ 4.35
TPRA1-203ENST00000393400 TTBK1Q5TCY1 1321 aaPredicted RBP42.23■■■■■ 4.35
TPRA1-203ENST00000393400 CTTNBP2Q8WZ74 1663 aa42.21■■■■■ 4.35
TPRA1-203ENST00000393400 EFCAB5A4FU69 1503 aa42.14■■■■■ 4.34
TPRA1-203ENST00000393400 IFT140Q96RY7 1462 aa42.1■■■■■ 4.33
TPRA1-203ENST00000393400 PBRM1Q86U86 1689 aa42.08■■■■■ 4.33
TPRA1-203ENST00000393400 MAP3K1Q13233 1512 aa42.07■■■■■ 4.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms