RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 NISCHQ9Y2I1 1504 aa21.79■■□□□ 1.08
SYT1-202ENST00000393240 CCDC180Q9P1Z9 1646 aa18.93■□□□□ 0.62
SYT1-202ENST00000393240 ZCCHC6Q5VYS8 1495 aaKnown RBP18.31■□□□□ 0.52
SYT1-202ENST00000393240 DCAF1Q9Y4B6 1507 aa18.05■□□□□ 0.48
SYT1-202ENST00000393240 DCAF8L2P0C7V8 631 aa17.94■□□□□ 0.46
SYT1-202ENST00000393240 MYO15BQ96JP2 1530 aa17.83■□□□□ 0.44
SYT1-202ENST00000393240 ABCC9O60706 1549 aa17.81■□□□□ 0.44
SYT1-202ENST00000393240 SHROOM4Q9ULL8 1493 aa17.76■□□□□ 0.43
SYT1-202ENST00000393240 NACADO15069 1562 aa17.65■□□□□ 0.42
SYT1-202ENST00000393240 RB1CC1Q8TDY2 1594 aa17.46■□□□□ 0.39
SYT1-202ENST00000393240 SCRIBQ14160 1630 aa17.38■□□□□ 0.37
SYT1-202ENST00000393240 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
SYT1-202ENST00000393240 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.32
SYT1-202ENST00000393240 RSF1Q96T23 1441 aaPredicted RBP16.94■□□□□ 0.3
SYT1-202ENST00000393240 BICRAQ9NZM4 1560 aa16.92■□□□□ 0.3
SYT1-202ENST00000393240 CECR2Q9BXF3 1484 aa16.9■□□□□ 0.3
SYT1-202ENST00000393240 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
SYT1-202ENST00000393240 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
SYT1-202ENST00000393240 BAZ1AQ9NRL2 1556 aaPredicted RBP16.81■□□□□ 0.28
SYT1-202ENST00000393240 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
SYT1-202ENST00000393240 WIZO95785 1651 aa16.65■□□□□ 0.26
SYT1-202ENST00000393240 PEG3Q9GZU2 1588 aa16.53■□□□□ 0.24
SYT1-202ENST00000393240 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.23
SYT1-202ENST00000393240 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
SYT1-202ENST00000393240 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
SYT1-202ENST00000393240 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
SYT1-202ENST00000393240 EIF4G1Q04637 1599 aaKnown RBP16.4■□□□□ 0.22
SYT1-202ENST00000393240 CCDC88BA6NC98 1476 aa16.36■□□□□ 0.21
SYT1-202ENST00000393240 BAZ1BQ9UIG0 1483 aaKnown RBP16.34■□□□□ 0.21
SYT1-202ENST00000393240 NCAPD3P42695 1498 aa16.31■□□□□ 0.2
SYT1-202ENST00000393240 HMGXB3Q12766 1538 aa16.27■□□□□ 0.19
SYT1-202ENST00000393240 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
SYT1-202ENST00000393240 CC2D2AQ9P2K1 1620 aa16.13■□□□□ 0.17
SYT1-202ENST00000393240 ABCC8Q09428 1581 aa15.99■□□□□ 0.15
SYT1-202ENST00000393240 CFTRP13569 1480 aa15.96■□□□□ 0.15
SYT1-202ENST00000393240 AEBP2Q6ZN18 517 aaPredicted RBP15.96■□□□□ 0.14
SYT1-202ENST00000393240 WRNQ14191 1432 aaPredicted RBP eCLIP15.93■□□□□ 0.14
SYT1-202ENST00000393240 CADPSQ9ULU8 1353 aa15.89■□□□□ 0.13
SYT1-202ENST00000393240 LOC105371045A0A1W2PR82 267 aa15.85■□□□□ 0.13
SYT1-202ENST00000393240 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
SYT1-202ENST00000393240 FAM9AQ8IZU1 332 aaPredicted RBP15.82■□□□□ 0.12
SYT1-202ENST00000393240 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
SYT1-202ENST00000393240 EEA1Q15075 1411 aa15.78■□□□□ 0.12
SYT1-202ENST00000393240 TOP2BQ02880 1626 aa15.78■□□□□ 0.12
SYT1-202ENST00000393240 BIVM-ERCC5R4GMW8 1640 aa15.75■□□□□ 0.11
SYT1-202ENST00000393240 SOGA1O94964 1423 aa15.75■□□□□ 0.11
SYT1-202ENST00000393240 CUX1P39880 1505 aa15.71■□□□□ 0.11
SYT1-202ENST00000393240 LAMC3Q9Y6N6 1575 aa15.71■□□□□ 0.11
SYT1-202ENST00000393240 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
SYT1-202ENST00000393240 FANCD2Q9BXW9 1451 aa15.69■□□□□ 0.1
SYT1-202ENST00000393240 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
SYT1-202ENST00000393240 RUSC2Q8N2Y8 1516 aa15.67■□□□□ 0.1
SYT1-202ENST00000393240 NESP48681 1621 aa15.66■□□□□ 0.1
SYT1-202ENST00000393240 PDS5BQ9NTI5 1447 aa15.61■□□□□ 0.09
SYT1-202ENST00000393240 CEP164Q9UPV0 1460 aa15.58■□□□□ 0.08
SYT1-202ENST00000393240 DNMBPQ6XZF7 1577 aa15.55■□□□□ 0.08
SYT1-202ENST00000393240 EHMT2Q96KQ7 1210 aa15.55■□□□□ 0.08
SYT1-202ENST00000393240 KIF27Q86VH2 1401 aa15.54■□□□□ 0.08
SYT1-202ENST00000393240 GOLGA3Q08378 1498 aa15.53■□□□□ 0.08
SYT1-202ENST00000393240 FGD5Q6ZNL6 1462 aa15.53■□□□□ 0.08
SYT1-202ENST00000393240 TNIKQ9UKE5 1360 aa15.53■□□□□ 0.08
SYT1-202ENST00000393240 TOPBP1Q92547 1522 aa15.52■□□□□ 0.08
SYT1-202ENST00000393240 KIF21BO75037 1637 aa15.52■□□□□ 0.08
SYT1-202ENST00000393240 URB2Q14146 1524 aaKnown RBP15.48■□□□□ 0.07
SYT1-202ENST00000393240 UBTFP17480 764 aaKnown RBP15.46■□□□□ 0.07
SYT1-202ENST00000393240 POLA1P09884 1462 aaPredicted RBP15.45■□□□□ 0.06
SYT1-202ENST00000393240 PRXQ9BXM0 1461 aa15.45■□□□□ 0.06
SYT1-202ENST00000393240 CUX2O14529 1486 aa15.45■□□□□ 0.06
SYT1-202ENST00000393240 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
SYT1-202ENST00000393240 ERICH3Q5RHP9 1530 aa15.42■□□□□ 0.06
SYT1-202ENST00000393240 ABCA10Q8WWZ4 1543 aa15.42■□□□□ 0.06
SYT1-202ENST00000393240 RAPGEF2Q9Y4G8 1499 aa15.42■□□□□ 0.06
SYT1-202ENST00000393240 CEP162Q5TB80 1403 aa15.41■□□□□ 0.06
SYT1-202ENST00000393240 IGF1RP08069 1367 aa15.41■□□□□ 0.06
SYT1-202ENST00000393240 RAD54L2Q9Y4B4 1467 aa15.39■□□□□ 0.05
SYT1-202ENST00000393240 MRC2Q9UBG0 1479 aa15.38■□□□□ 0.05
SYT1-202ENST00000393240 CARMIL1Q5VZK9 1371 aa15.32■□□□□ 0.04
SYT1-202ENST00000393240 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
SYT1-202ENST00000393240 WDR62O43379 1518 aa15.29■□□□□ 0.04
SYT1-202ENST00000393240 CLIP1P30622 1438 aa15.28■□□□□ 0.04
SYT1-202ENST00000393240 ERCC6Q03468 1493 aa15.28■□□□□ 0.04
SYT1-202ENST00000393240 TARBP1Q13395 1621 aaKnown RBP15.27■□□□□ 0.04
SYT1-202ENST00000393240 ABCA5Q8WWZ7 1642 aa15.26■□□□□ 0.03
SYT1-202ENST00000393240 TDRD9Q8NDG6 1382 aaKnown RBP15.25■□□□□ 0.03
SYT1-202ENST00000393240 GAPVD1Q14C86 1478 aa15.25■□□□□ 0.03
SYT1-202ENST00000393240 TRIM26Q12899 539 aaPredicted RBP15.24■□□□□ 0.03
SYT1-202ENST00000393240 CUL7Q14999 1698 aa15.23■□□□□ 0.03
SYT1-202ENST00000393240 IFT140Q96RY7 1462 aa15.22■□□□□ 0.03
SYT1-202ENST00000393240 PCGF6Q9BYE7 350 aa15.2■□□□□ 0.02
SYT1-202ENST00000393240 THOC2Q8NI27 1593 aaKnown RBP15.2■□□□□ 0.02
SYT1-202ENST00000393240 VPS8Q8N3P4 1428 aa15.17■□□□□ 0.02
SYT1-202ENST00000393240 AQRO60306 1485 aaKnown RBP eCLIP15.14■□□□□ 0.01
SYT1-202ENST00000393240 RANGAP1P46060 587 aaPredicted RBP15.13■□□□□ 0.01
SYT1-202ENST00000393240 GRIN2BQ13224 1484 aa15.13■□□□□ 0.01
SYT1-202ENST00000393240 ARAP1Q96P48 1450 aa15.11■□□□□ 0.01
SYT1-202ENST00000393240 ARHGAP35Q9NRY4 1499 aa15.1■□□□□ 0.01
SYT1-202ENST00000393240 FHAD1B1AJZ9 1412 aa15.1■□□□□ 0.01
SYT1-202ENST00000393240 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
SYT1-202ENST00000393240 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
SYT1-202ENST00000393240 PPARGC1BQ86YN6 1023 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms