RNA–Protein interactions for RNA: ENST00000392784.6

USP30-203, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2 BASIC

Gene USP30, Length 2,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-203ENST00000392784 NISCHQ9Y2I1 1504 aa20.55■□□□□ 0.88
USP30-203ENST00000392784 CCDC180Q9P1Z9 1646 aa17.74■□□□□ 0.43
USP30-203ENST00000392784 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
USP30-203ENST00000392784 SHROOM4Q9ULL8 1493 aa17.15■□□□□ 0.34
USP30-203ENST00000392784 DCAF8L2P0C7V8 631 aa17.05■□□□□ 0.32
USP30-203ENST00000392784 DCAF1Q9Y4B6 1507 aa16.87■□□□□ 0.29
USP30-203ENST00000392784 ABCC9O60706 1549 aa16.74■□□□□ 0.27
USP30-203ENST00000392784 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
USP30-203ENST00000392784 MYO15BQ96JP2 1530 aa16.54■□□□□ 0.24
USP30-203ENST00000392784 SCRIBQ14160 1630 aa16.52■□□□□ 0.24
USP30-203ENST00000392784 NACADO15069 1562 aa16.45■□□□□ 0.22
USP30-203ENST00000392784 RB1CC1Q8TDY2 1594 aa16.28■□□□□ 0.2
USP30-203ENST00000392784 UNC13AQ9UPW8 1703 aa16.14■□□□□ 0.17
USP30-203ENST00000392784 RSF1Q96T23 1441 aaPredicted RBP16.07■□□□□ 0.16
USP30-203ENST00000392784 CECR2Q9BXF3 1484 aa16.07■□□□□ 0.16
USP30-203ENST00000392784 MROH2BQ7Z745 1585 aa15.97■□□□□ 0.15
USP30-203ENST00000392784 CHIC1Q5VXU3 224 aa15.92■□□□□ 0.14
USP30-203ENST00000392784 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
USP30-203ENST00000392784 WIZO95785 1651 aa15.89■□□□□ 0.13
USP30-203ENST00000392784 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
USP30-203ENST00000392784 BAZ1AQ9NRL2 1556 aaPredicted RBP15.81■□□□□ 0.12
USP30-203ENST00000392784 SMARCA4P51532 1647 aa15.78■□□□□ 0.12
USP30-203ENST00000392784 TOP2AP11388 1531 aaKnown RBP15.6■□□□□ 0.09
USP30-203ENST00000392784 SMARCA2P51531 1590 aa15.52■□□□□ 0.08
USP30-203ENST00000392784 CCDC88BA6NC98 1476 aa15.51■□□□□ 0.07
USP30-203ENST00000392784 EIF4G1Q04637 1599 aaKnown RBP15.51■□□□□ 0.07
USP30-203ENST00000392784 PEG3Q9GZU2 1588 aa15.49■□□□□ 0.07
USP30-203ENST00000392784 TRIM41Q8WV44 630 aa15.45■□□□□ 0.06
USP30-203ENST00000392784 ATAD2BQ9ULI0 1458 aa15.44■□□□□ 0.06
USP30-203ENST00000392784 LOC105371045A0A1W2PR82 267 aa15.43■□□□□ 0.06
USP30-203ENST00000392784 BAZ1BQ9UIG0 1483 aaKnown RBP15.36■□□□□ 0.05
USP30-203ENST00000392784 ABCC8Q09428 1581 aa15.35■□□□□ 0.05
USP30-203ENST00000392784 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.04
USP30-203ENST00000392784 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.03
USP30-203ENST00000392784 NCAPD3P42695 1498 aa15.21■□□□□ 0.02
USP30-203ENST00000392784 HMGXB3Q12766 1538 aa15.2■□□□□ 0.02
USP30-203ENST00000392784 CC2D2AQ9P2K1 1620 aa15.11■□□□□ 0.01
USP30-203ENST00000392784 SYNJ1O43426 1573 aa15.1■□□□□ 0.01
USP30-203ENST00000392784 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
USP30-203ENST00000392784 SOGA1O94964 1423 aa15.08■□□□□ 0
USP30-203ENST00000392784 RUSC2Q8N2Y8 1516 aa15.06■□□□□ 0
USP30-203ENST00000392784 CFTRP13569 1480 aa14.96□□□□□ -0.01
USP30-203ENST00000392784 TOP2BQ02880 1626 aa14.94□□□□□ -0.02
USP30-203ENST00000392784 PCGF6Q9BYE7 350 aa14.93□□□□□ -0.02
USP30-203ENST00000392784 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
USP30-203ENST00000392784 BIVM-ERCC5R4GMW8 1640 aa14.92□□□□□ -0.02
USP30-203ENST00000392784 CUX1P39880 1505 aa14.9□□□□□ -0.02
USP30-203ENST00000392784 CSRNP3Q8WYN3 585 aa14.89□□□□□ -0.03
USP30-203ENST00000392784 EEA1Q15075 1411 aa14.88□□□□□ -0.03
USP30-203ENST00000392784 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
USP30-203ENST00000392784 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
USP30-203ENST00000392784 NESP48681 1621 aa14.81□□□□□ -0.04
USP30-203ENST00000392784 CEP162Q5TB80 1403 aa14.79□□□□□ -0.04
USP30-203ENST00000392784 GOLGA3Q08378 1498 aa14.78□□□□□ -0.04
USP30-203ENST00000392784 UBTFP17480 764 aaKnown RBP14.78□□□□□ -0.04
USP30-203ENST00000392784 KIF21BO75037 1637 aa14.78□□□□□ -0.04
USP30-203ENST00000392784 TNIKQ9UKE5 1360 aa14.77□□□□□ -0.04
USP30-203ENST00000392784 PPARGC1BQ86YN6 1023 aaKnown RBP14.76□□□□□ -0.05
USP30-203ENST00000392784 CEP164Q9UPV0 1460 aa14.75□□□□□ -0.05
USP30-203ENST00000392784 RAPGEF2Q9Y4G8 1499 aa14.74□□□□□ -0.05
USP30-203ENST00000392784 TRIM26Q12899 539 aaPredicted RBP14.74□□□□□ -0.05
USP30-203ENST00000392784 FANCD2Q9BXW9 1451 aa14.74□□□□□ -0.05
USP30-203ENST00000392784 FGD5Q6ZNL6 1462 aa14.68□□□□□ -0.06
USP30-203ENST00000392784 KIF27Q86VH2 1401 aa14.65□□□□□ -0.06
USP30-203ENST00000392784 LAMC3Q9Y6N6 1575 aa14.65□□□□□ -0.06
USP30-203ENST00000392784 PRXQ9BXM0 1461 aa14.64□□□□□ -0.07
USP30-203ENST00000392784 CUX2O14529 1486 aa14.63□□□□□ -0.07
USP30-203ENST00000392784 HRCP23327 699 aa14.63□□□□□ -0.07
USP30-203ENST00000392784 RANGAP1P46060 587 aaPredicted RBP14.62□□□□□ -0.07
USP30-203ENST00000392784 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
USP30-203ENST00000392784 TOPBP1Q92547 1522 aa14.61□□□□□ -0.07
USP30-203ENST00000392784 TTBK1Q5TCY1 1321 aaPredicted RBP14.6□□□□□ -0.07
USP30-203ENST00000392784 KIF21AQ7Z4S6 1674 aa14.6□□□□□ -0.07
USP30-203ENST00000392784 ERICH3Q5RHP9 1530 aa14.6□□□□□ -0.07
USP30-203ENST00000392784 CLIP1P30622 1438 aa14.59□□□□□ -0.07
USP30-203ENST00000392784 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
USP30-203ENST00000392784 URB2Q14146 1524 aaKnown RBP14.58□□□□□ -0.07
USP30-203ENST00000392784 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
USP30-203ENST00000392784 IGF1RP08069 1367 aa14.55□□□□□ -0.08
USP30-203ENST00000392784 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
USP30-203ENST00000392784 ABCA10Q8WWZ4 1543 aa14.49□□□□□ -0.09
USP30-203ENST00000392784 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
USP30-203ENST00000392784 VPS8Q8N3P4 1428 aa14.48□□□□□ -0.09
USP30-203ENST00000392784 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.09
USP30-203ENST00000392784 ARAP1Q96P48 1450 aa14.46□□□□□ -0.09
USP30-203ENST00000392784 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
USP30-203ENST00000392784 ARHGAP35Q9NRY4 1499 aa14.4□□□□□ -0.1
USP30-203ENST00000392784 ABCA5Q8WWZ7 1642 aa14.4□□□□□ -0.1
USP30-203ENST00000392784 TARBP1Q13395 1621 aaKnown RBP14.39□□□□□ -0.11
USP30-203ENST00000392784 CUL7Q14999 1698 aa14.36□□□□□ -0.11
USP30-203ENST00000392784 MRC2Q9UBG0 1479 aa14.36□□□□□ -0.11
USP30-203ENST00000392784 GAPVD1Q14C86 1478 aa14.34□□□□□ -0.11
USP30-203ENST00000392784 CTTNBP2Q8WZ74 1663 aa14.3□□□□□ -0.12
USP30-203ENST00000392784 APLP2Q06481 763 aa14.3□□□□□ -0.12
USP30-203ENST00000392784 PBRM1Q86U86 1689 aa14.29□□□□□ -0.12
USP30-203ENST00000392784 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
USP30-203ENST00000392784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.29□□□□□ -0.12
USP30-203ENST00000392784 KANK4Q5T7N3 995 aaPredicted RBP14.29□□□□□ -0.12
USP30-203ENST00000392784 P3H3Q8IVL6 736 aa14.27□□□□□ -0.12
USP30-203ENST00000392784 WDR62O43379 1518 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms