RNA–Protein interactions for RNA: ENST00000392558.4

RPS27-202, Transcript of ribosomal protein S27, humanhuman

TSL 2 BASIC

Gene RPS27, Length 625 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27-202ENST00000392558 NISCHQ9Y2I1 1504 aa19.71■□□□□ 0.75
RPS27-202ENST00000392558 AEBP2Q6ZN18 517 aaPredicted RBP18.02■□□□□ 0.48
RPS27-202ENST00000392558 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
RPS27-202ENST00000392558 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
RPS27-202ENST00000392558 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
RPS27-202ENST00000392558 DCAF1Q9Y4B6 1507 aa16.38■□□□□ 0.21
RPS27-202ENST00000392558 SHROOM4Q9ULL8 1493 aa16.18■□□□□ 0.18
RPS27-202ENST00000392558 DCAF8L2P0C7V8 631 aa16.17■□□□□ 0.18
RPS27-202ENST00000392558 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
RPS27-202ENST00000392558 NACADO15069 1562 aa15.87■□□□□ 0.13
RPS27-202ENST00000392558 SUPT5HO00267 1087 aaKnown RBP15.81■□□□□ 0.12
RPS27-202ENST00000392558 ABCC9O60706 1549 aa15.76■□□□□ 0.11
RPS27-202ENST00000392558 RB1CC1Q8TDY2 1594 aa15.64■□□□□ 0.09
RPS27-202ENST00000392558 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
RPS27-202ENST00000392558 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
RPS27-202ENST00000392558 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.05
RPS27-202ENST00000392558 UNC13AQ9UPW8 1703 aa15.26■□□□□ 0.03
RPS27-202ENST00000392558 BAZ1AQ9NRL2 1556 aaPredicted RBP15.23■□□□□ 0.03
RPS27-202ENST00000392558 SENP3Q9H4L4 574 aaPredicted RBP15.21■□□□□ 0.03
RPS27-202ENST00000392558 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
RPS27-202ENST00000392558 MROH2BQ7Z745 1585 aa15.18■□□□□ 0.02
RPS27-202ENST00000392558 WIZO95785 1651 aa15.08■□□□□ 0
RPS27-202ENST00000392558 SMARCA4P51532 1647 aa15.07■□□□□ 0
RPS27-202ENST00000392558 BICRAQ9NZM4 1560 aa15.06■□□□□ 0
RPS27-202ENST00000392558 TOP2AP11388 1531 aaKnown RBP14.98□□□□□ -0.01
RPS27-202ENST00000392558 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
RPS27-202ENST00000392558 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
RPS27-202ENST00000392558 PEG3Q9GZU2 1588 aa14.91□□□□□ -0.02
RPS27-202ENST00000392558 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
RPS27-202ENST00000392558 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
RPS27-202ENST00000392558 EIF4G1Q04637 1599 aaKnown RBP14.77□□□□□ -0.05
RPS27-202ENST00000392558 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
RPS27-202ENST00000392558 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
RPS27-202ENST00000392558 LOC105371045A0A1W2PR82 267 aa14.7□□□□□ -0.06
RPS27-202ENST00000392558 NCAPD3P42695 1498 aa14.62□□□□□ -0.07
RPS27-202ENST00000392558 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
RPS27-202ENST00000392558 EEA1Q15075 1411 aa14.58□□□□□ -0.08
RPS27-202ENST00000392558 FAM9AQ8IZU1 332 aaPredicted RBP14.55□□□□□ -0.08
RPS27-202ENST00000392558 ABCC8Q09428 1581 aa14.53□□□□□ -0.08
RPS27-202ENST00000392558 WRNQ14191 1432 aaPredicted RBP eCLIP14.5□□□□□ -0.09
RPS27-202ENST00000392558 TRIM26Q12899 539 aaPredicted RBP14.44□□□□□ -0.1
RPS27-202ENST00000392558 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
RPS27-202ENST00000392558 PCGF6Q9BYE7 350 aa14.41□□□□□ -0.1
RPS27-202ENST00000392558 SYNJ1O43426 1573 aa14.35□□□□□ -0.11
RPS27-202ENST00000392558 SOGA1O94964 1423 aa14.35□□□□□ -0.11
RPS27-202ENST00000392558 TOP2BQ02880 1626 aa14.35□□□□□ -0.11
RPS27-202ENST00000392558 CFTRP13569 1480 aa14.35□□□□□ -0.11
RPS27-202ENST00000392558 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
RPS27-202ENST00000392558 TNIKQ9UKE5 1360 aa14.34□□□□□ -0.11
RPS27-202ENST00000392558 BIVM-ERCC5R4GMW8 1640 aa14.34□□□□□ -0.11
RPS27-202ENST00000392558 CC2D2AQ9P2K1 1620 aa14.3□□□□□ -0.12
RPS27-202ENST00000392558 HRCP23327 699 aa14.3□□□□□ -0.12
RPS27-202ENST00000392558 GOLGA3Q08378 1498 aa14.3□□□□□ -0.12
RPS27-202ENST00000392558 CEP164Q9UPV0 1460 aa14.29□□□□□ -0.12
RPS27-202ENST00000392558 KIF21BO75037 1637 aa14.28□□□□□ -0.12
RPS27-202ENST00000392558 CADPSQ9ULU8 1353 aa14.26□□□□□ -0.13
RPS27-202ENST00000392558 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
RPS27-202ENST00000392558 RUSC2Q8N2Y8 1516 aa14.25□□□□□ -0.13
RPS27-202ENST00000392558 UBTFP17480 764 aaKnown RBP14.24□□□□□ -0.13
RPS27-202ENST00000392558 CEP162Q5TB80 1403 aa14.22□□□□□ -0.13
RPS27-202ENST00000392558 FOXD1Q16676 465 aa14.2□□□□□ -0.14
RPS27-202ENST00000392558 CUX1P39880 1505 aa14.18□□□□□ -0.14
RPS27-202ENST00000392558 PLPPR3Q6T4P5 718 aa14.17□□□□□ -0.14
RPS27-202ENST00000392558 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
RPS27-202ENST00000392558 ZEB1P37275 1124 aaPredicted RBP14.15□□□□□ -0.14
RPS27-202ENST00000392558 ERICH3Q5RHP9 1530 aa14.15□□□□□ -0.14
RPS27-202ENST00000392558 PRXQ9BXM0 1461 aa14.09□□□□□ -0.15
RPS27-202ENST00000392558 LAMC3Q9Y6N6 1575 aa14.08□□□□□ -0.16
RPS27-202ENST00000392558 CLIP1P30622 1438 aa14.07□□□□□ -0.16
RPS27-202ENST00000392558 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
RPS27-202ENST00000392558 RAPGEF2Q9Y4G8 1499 aa14.06□□□□□ -0.16
RPS27-202ENST00000392558 DNMBPQ6XZF7 1577 aa14.01□□□□□ -0.17
RPS27-202ENST00000392558 APLP2Q06481 763 aa14□□□□□ -0.17
RPS27-202ENST00000392558 VPS8Q8N3P4 1428 aa13.99□□□□□ -0.17
RPS27-202ENST00000392558 FGD5Q6ZNL6 1462 aa13.99□□□□□ -0.17
RPS27-202ENST00000392558 PDS5BQ9NTI5 1447 aa13.98□□□□□ -0.17
RPS27-202ENST00000392558 CUX2O14529 1486 aa13.98□□□□□ -0.17
RPS27-202ENST00000392558 IGF1RP08069 1367 aa13.96□□□□□ -0.18
RPS27-202ENST00000392558 TOPBP1Q92547 1522 aa13.95□□□□□ -0.18
RPS27-202ENST00000392558 PPARGC1BQ86YN6 1023 aaKnown RBP13.93□□□□□ -0.18
RPS27-202ENST00000392558 ABCA10Q8WWZ4 1543 aa13.92□□□□□ -0.18
RPS27-202ENST00000392558 CARMIL1Q5VZK9 1371 aa13.92□□□□□ -0.18
RPS27-202ENST00000392558 NESP48681 1621 aa13.9□□□□□ -0.18
RPS27-202ENST00000392558 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
RPS27-202ENST00000392558 CUL7Q14999 1698 aa13.86□□□□□ -0.19
RPS27-202ENST00000392558 ARAP1Q96P48 1450 aa13.83□□□□□ -0.2
RPS27-202ENST00000392558 URB2Q14146 1524 aaKnown RBP13.83□□□□□ -0.2
RPS27-202ENST00000392558 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
RPS27-202ENST00000392558 RAD54L2Q9Y4B4 1467 aa13.8□□□□□ -0.2
RPS27-202ENST00000392558 RANGAP1P46060 587 aaPredicted RBP13.79□□□□□ -0.2
RPS27-202ENST00000392558 ARHGAP35Q9NRY4 1499 aa13.79□□□□□ -0.2
RPS27-202ENST00000392558 KIF21AQ7Z4S6 1674 aa13.79□□□□□ -0.2
RPS27-202ENST00000392558 CCER1Q8TC90 406 aaPredicted RBP13.78□□□□□ -0.2
RPS27-202ENST00000392558 MAP3K1Q13233 1512 aa13.78□□□□□ -0.2
RPS27-202ENST00000392558 FHAD1B1AJZ9 1412 aa13.75□□□□□ -0.21
RPS27-202ENST00000392558 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
RPS27-202ENST00000392558 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
RPS27-202ENST00000392558 EFCAB5A4FU69 1503 aa13.74□□□□□ -0.21
RPS27-202ENST00000392558 CTTNBP2Q8WZ74 1663 aa13.73□□□□□ -0.21
RPS27-202ENST00000392558 TTBK1Q5TCY1 1321 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms