RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 NISCHQ9Y2I1 1504 aa26.91■■□□□ 1.9
TRAF3IP2-208ENST00000392556 CCDC180Q9P1Z9 1646 aa24.19■■□□□ 1.46
TRAF3IP2-208ENST00000392556 ABCC9O60706 1549 aa23.99■■□□□ 1.43
TRAF3IP2-208ENST00000392556 RB1CC1Q8TDY2 1594 aa23■■□□□ 1.27
TRAF3IP2-208ENST00000392556 NACADO15069 1562 aa22.88■■□□□ 1.25
TRAF3IP2-208ENST00000392556 MYO15BQ96JP2 1530 aa22.66■■□□□ 1.22
TRAF3IP2-208ENST00000392556 DCAF8L2P0C7V8 631 aa22.56■■□□□ 1.2
TRAF3IP2-208ENST00000392556 DNAJC5BQ9UF47 199 aa22.41■■□□□ 1.18
TRAF3IP2-208ENST00000392556 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
TRAF3IP2-208ENST00000392556 ZCCHC6Q5VYS8 1495 aaKnown RBP22.32■■□□□ 1.16
TRAF3IP2-208ENST00000392556 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
TRAF3IP2-208ENST00000392556 PABPN1Q86U42 306 aaKnown RBP eCLIP22.31■■□□□ 1.16
TRAF3IP2-208ENST00000392556 BICRAQ9NZM4 1560 aa22.22■■□□□ 1.15
TRAF3IP2-208ENST00000392556 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
TRAF3IP2-208ENST00000392556 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
TRAF3IP2-208ENST00000392556 CC2D2AQ9P2K1 1620 aa21.71■■□□□ 1.07
TRAF3IP2-208ENST00000392556 EIF4G1Q04637 1599 aaKnown RBP21.71■■□□□ 1.07
TRAF3IP2-208ENST00000392556 CECR2Q9BXF3 1484 aa21.68■■□□□ 1.06
TRAF3IP2-208ENST00000392556 NCAPD3P42695 1498 aa21.11■□□□□ 0.97
TRAF3IP2-208ENST00000392556 SMARCA2P51531 1590 aa21■□□□□ 0.95
TRAF3IP2-208ENST00000392556 ATAD2BQ9ULI0 1458 aa20.99■□□□□ 0.95
TRAF3IP2-208ENST00000392556 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
TRAF3IP2-208ENST00000392556 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
TRAF3IP2-208ENST00000392556 BAZ1AQ9NRL2 1556 aaPredicted RBP20.93■□□□□ 0.94
TRAF3IP2-208ENST00000392556 PEG3Q9GZU2 1588 aa20.84■□□□□ 0.93
TRAF3IP2-208ENST00000392556 CUX2O14529 1486 aa20.83■□□□□ 0.93
TRAF3IP2-208ENST00000392556 BAZ1BQ9UIG0 1483 aaKnown RBP20.8■□□□□ 0.92
TRAF3IP2-208ENST00000392556 ERCC6Q03468 1493 aa20.79■□□□□ 0.92
TRAF3IP2-208ENST00000392556 DNAJC5Q9H3Z4 198 aa20.7■□□□□ 0.9
TRAF3IP2-208ENST00000392556 MROH2BQ7Z745 1585 aa20.66■□□□□ 0.9
TRAF3IP2-208ENST00000392556 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
TRAF3IP2-208ENST00000392556 NESP48681 1621 aa20.59■□□□□ 0.89
TRAF3IP2-208ENST00000392556 PDS5BQ9NTI5 1447 aa20.52■□□□□ 0.88
TRAF3IP2-208ENST00000392556 THOC2Q8NI27 1593 aaKnown RBP20.45■□□□□ 0.86
TRAF3IP2-208ENST00000392556 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
TRAF3IP2-208ENST00000392556 WIZO95785 1651 aa20.38■□□□□ 0.85
TRAF3IP2-208ENST00000392556 KIF21AQ7Z4S6 1674 aa20.34■□□□□ 0.85
TRAF3IP2-208ENST00000392556 MRC2Q9UBG0 1479 aa20.29■□□□□ 0.84
TRAF3IP2-208ENST00000392556 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
TRAF3IP2-208ENST00000392556 WDR62O43379 1518 aa20.24■□□□□ 0.83
TRAF3IP2-208ENST00000392556 TOP2AP11388 1531 aaKnown RBP20.24■□□□□ 0.83
TRAF3IP2-208ENST00000392556 CFTRP13569 1480 aa20.22■□□□□ 0.83
TRAF3IP2-208ENST00000392556 CEP164Q9UPV0 1460 aa20.21■□□□□ 0.83
TRAF3IP2-208ENST00000392556 FANCD2Q9BXW9 1451 aa20.17■□□□□ 0.82
TRAF3IP2-208ENST00000392556 PRDM2Q13029 1718 aa19.98■□□□□ 0.79
TRAF3IP2-208ENST00000392556 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
TRAF3IP2-208ENST00000392556 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
TRAF3IP2-208ENST00000392556 ABCC8Q09428 1581 aa19.89■□□□□ 0.77
TRAF3IP2-208ENST00000392556 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
TRAF3IP2-208ENST00000392556 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
TRAF3IP2-208ENST00000392556 TOPBP1Q92547 1522 aa19.79■□□□□ 0.76
TRAF3IP2-208ENST00000392556 DNMBPQ6XZF7 1577 aa19.75■□□□□ 0.75
TRAF3IP2-208ENST00000392556 TRIM41Q8WV44 630 aa19.68■□□□□ 0.74
TRAF3IP2-208ENST00000392556 ZNF608Q9ULD9 1512 aaPredicted RBP19.67■□□□□ 0.74
TRAF3IP2-208ENST00000392556 EIF4G3O43432 1585 aaKnown RBP19.6■□□□□ 0.73
TRAF3IP2-208ENST00000392556 TARBP1Q13395 1621 aaKnown RBP19.59■□□□□ 0.73
TRAF3IP2-208ENST00000392556 POLA1P09884 1462 aaPredicted RBP19.58■□□□□ 0.72
TRAF3IP2-208ENST00000392556 WDR97A6NE52 1622 aa19.57■□□□□ 0.72
TRAF3IP2-208ENST00000392556 SOGA1O94964 1423 aa19.52■□□□□ 0.71
TRAF3IP2-208ENST00000392556 AQRO60306 1485 aaKnown RBP eCLIP19.51■□□□□ 0.71
TRAF3IP2-208ENST00000392556 RIMBP3CA6NJZ7 1639 aa19.49■□□□□ 0.71
TRAF3IP2-208ENST00000392556 RIMBP3BA6NNM3 1639 aa19.49■□□□□ 0.71
TRAF3IP2-208ENST00000392556 RIMBP3Q9UFD9 1639 aa19.49■□□□□ 0.71
TRAF3IP2-208ENST00000392556 ARHGEF11O15085 1522 aa19.47■□□□□ 0.71
TRAF3IP2-208ENST00000392556 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
TRAF3IP2-208ENST00000392556 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
TRAF3IP2-208ENST00000392556 CUX1P39880 1505 aa19.42■□□□□ 0.7
TRAF3IP2-208ENST00000392556 CHD1O14646 1710 aa19.41■□□□□ 0.7
TRAF3IP2-208ENST00000392556 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
TRAF3IP2-208ENST00000392556 MAGI1Q96QZ7 1491 aaPredicted RBP19.4■□□□□ 0.7
TRAF3IP2-208ENST00000392556 GRIN2BQ13224 1484 aa19.38■□□□□ 0.69
TRAF3IP2-208ENST00000392556 FBLN2P98095 1184 aa19.37■□□□□ 0.69
TRAF3IP2-208ENST00000392556 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
TRAF3IP2-208ENST00000392556 SUPT5HO00267 1087 aaKnown RBP19.32■□□□□ 0.68
TRAF3IP2-208ENST00000392556 PELP1Q8IZL8 1130 aaKnown RBP19.32■□□□□ 0.68
TRAF3IP2-208ENST00000392556 CHMP7Q8WUX9 453 aaPredicted RBP19.32■□□□□ 0.68
TRAF3IP2-208ENST00000392556 SYNJ2O15056 1496 aa19.31■□□□□ 0.68
TRAF3IP2-208ENST00000392556 SYNJ1O43426 1573 aa19.3■□□□□ 0.68
TRAF3IP2-208ENST00000392556 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
TRAF3IP2-208ENST00000392556 GAPVD1Q14C86 1478 aa19.28■□□□□ 0.68
TRAF3IP2-208ENST00000392556 CLASP1Q7Z460 1538 aa19.28■□□□□ 0.68
TRAF3IP2-208ENST00000392556 CYB5RLQ6IPT4 315 aa19.27■□□□□ 0.68
TRAF3IP2-208ENST00000392556 ARAP1Q96P48 1450 aa19.26■□□□□ 0.67
TRAF3IP2-208ENST00000392556 WRNQ14191 1432 aaPredicted RBP eCLIP19.24■□□□□ 0.67
TRAF3IP2-208ENST00000392556 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
TRAF3IP2-208ENST00000392556 PBRM1Q86U86 1689 aa19.21■□□□□ 0.67
TRAF3IP2-208ENST00000392556 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
TRAF3IP2-208ENST00000392556 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
TRAF3IP2-208ENST00000392556 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
TRAF3IP2-208ENST00000392556 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.65
TRAF3IP2-208ENST00000392556 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
TRAF3IP2-208ENST00000392556 ADAMTS12P58397 1594 aa19.08■□□□□ 0.64
TRAF3IP2-208ENST00000392556 NUP160Q12769 1436 aa19.06■□□□□ 0.64
TRAF3IP2-208ENST00000392556 TRHP20396 242 aaPredicted RBP19.05■□□□□ 0.64
TRAF3IP2-208ENST00000392556 CEP170Q5SW79 1584 aa18.97■□□□□ 0.63
TRAF3IP2-208ENST00000392556 SHROOM2Q13796 1616 aa18.95■□□□□ 0.62
TRAF3IP2-208ENST00000392556 MYT1Q01538 1121 aa18.86■□□□□ 0.61
TRAF3IP2-208ENST00000392556 KIF27Q86VH2 1401 aa18.85■□□□□ 0.61
TRAF3IP2-208ENST00000392556 ERCC6L2Q5T890 1561 aa18.85■□□□□ 0.61
TRAF3IP2-208ENST00000392556 JPH4Q96JJ6 628 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 196.7 ms