RNA–Protein interactions for RNA: ENST00000392050.2

CLCP2-201, Transcript of Charcot-Leyden crystal protein pseudogene 2, humanhuman

BASIC

Gene CLCP2, Length 421 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCP2-201ENST00000392050 NISCHQ9Y2I1 1504 aa26.98■■□□□ 1.91
CLCP2-201ENST00000392050 CCDC180Q9P1Z9 1646 aa24.21■■□□□ 1.47
CLCP2-201ENST00000392050 ABCC9O60706 1549 aa23.95■■□□□ 1.43
CLCP2-201ENST00000392050 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
CLCP2-201ENST00000392050 NACADO15069 1562 aa22.83■■□□□ 1.25
CLCP2-201ENST00000392050 DCAF8L2P0C7V8 631 aa22.74■■□□□ 1.23
CLCP2-201ENST00000392050 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
CLCP2-201ENST00000392050 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
CLCP2-201ENST00000392050 UNC13AQ9UPW8 1703 aa22.39■■□□□ 1.17
CLCP2-201ENST00000392050 DCAF1Q9Y4B6 1507 aa22.33■■□□□ 1.17
CLCP2-201ENST00000392050 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.16
CLCP2-201ENST00000392050 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
CLCP2-201ENST00000392050 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
CLCP2-201ENST00000392050 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
CLCP2-201ENST00000392050 SHROOM4Q9ULL8 1493 aa22.01■■□□□ 1.11
CLCP2-201ENST00000392050 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
CLCP2-201ENST00000392050 EIF4G1Q04637 1599 aaKnown RBP21.66■■□□□ 1.06
CLCP2-201ENST00000392050 CECR2Q9BXF3 1484 aa21.58■■□□□ 1.04
CLCP2-201ENST00000392050 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
CLCP2-201ENST00000392050 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
CLCP2-201ENST00000392050 SMARCA2P51531 1590 aa21■□□□□ 0.95
CLCP2-201ENST00000392050 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
CLCP2-201ENST00000392050 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
CLCP2-201ENST00000392050 HMGXB3Q12766 1538 aa20.92■□□□□ 0.94
CLCP2-201ENST00000392050 BAZ1BQ9UIG0 1483 aaKnown RBP20.84■□□□□ 0.93
CLCP2-201ENST00000392050 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
CLCP2-201ENST00000392050 MROH2BQ7Z745 1585 aa20.76■□□□□ 0.91
CLCP2-201ENST00000392050 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
CLCP2-201ENST00000392050 CUX2O14529 1486 aa20.62■□□□□ 0.89
CLCP2-201ENST00000392050 NESP48681 1621 aa20.6■□□□□ 0.89
CLCP2-201ENST00000392050 LAMC3Q9Y6N6 1575 aa20.57■□□□□ 0.88
CLCP2-201ENST00000392050 WIZO95785 1651 aa20.56■□□□□ 0.88
CLCP2-201ENST00000392050 PDS5BQ9NTI5 1447 aa20.45■□□□□ 0.86
CLCP2-201ENST00000392050 KIF21AQ7Z4S6 1674 aa20.41■□□□□ 0.86
CLCP2-201ENST00000392050 RSF1Q96T23 1441 aaPredicted RBP20.4■□□□□ 0.86
CLCP2-201ENST00000392050 CADPSQ9ULU8 1353 aa20.4■□□□□ 0.86
CLCP2-201ENST00000392050 THOC2Q8NI27 1593 aaKnown RBP20.39■□□□□ 0.85
CLCP2-201ENST00000392050 TOP2AP11388 1531 aaKnown RBP20.34■□□□□ 0.85
CLCP2-201ENST00000392050 DNAJC5Q9H3Z4 198 aa20.33■□□□□ 0.85
CLCP2-201ENST00000392050 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
CLCP2-201ENST00000392050 CEP164Q9UPV0 1460 aa20.22■□□□□ 0.83
CLCP2-201ENST00000392050 CFTRP13569 1480 aa20.2■□□□□ 0.82
CLCP2-201ENST00000392050 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
CLCP2-201ENST00000392050 WDR62O43379 1518 aa20.17■□□□□ 0.82
CLCP2-201ENST00000392050 PRDM2Q13029 1718 aa20.11■□□□□ 0.81
CLCP2-201ENST00000392050 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
CLCP2-201ENST00000392050 URB2Q14146 1524 aaKnown RBP19.96■□□□□ 0.79
CLCP2-201ENST00000392050 ABCC8Q09428 1581 aa19.85■□□□□ 0.77
CLCP2-201ENST00000392050 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
CLCP2-201ENST00000392050 IFT140Q96RY7 1462 aa19.79■□□□□ 0.76
CLCP2-201ENST00000392050 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
CLCP2-201ENST00000392050 OSCARQ8IYS5 282 aa19.7■□□□□ 0.74
CLCP2-201ENST00000392050 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
CLCP2-201ENST00000392050 ZNF608Q9ULD9 1512 aaPredicted RBP19.67■□□□□ 0.74
CLCP2-201ENST00000392050 EIF4G3O43432 1585 aaKnown RBP19.64■□□□□ 0.73
CLCP2-201ENST00000392050 POLA1P09884 1462 aaPredicted RBP19.61■□□□□ 0.73
CLCP2-201ENST00000392050 TARBP1Q13395 1621 aaKnown RBP19.61■□□□□ 0.73
CLCP2-201ENST00000392050 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
CLCP2-201ENST00000392050 SOGA1O94964 1423 aa19.54■□□□□ 0.72
CLCP2-201ENST00000392050 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.72
CLCP2-201ENST00000392050 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
CLCP2-201ENST00000392050 WDR97A6NE52 1622 aa19.51■□□□□ 0.71
CLCP2-201ENST00000392050 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
CLCP2-201ENST00000392050 CUX1P39880 1505 aa19.51■□□□□ 0.71
CLCP2-201ENST00000392050 CHD1O14646 1710 aa19.48■□□□□ 0.71
CLCP2-201ENST00000392050 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
CLCP2-201ENST00000392050 FBLN2P98095 1184 aa19.44■□□□□ 0.7
CLCP2-201ENST00000392050 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
CLCP2-201ENST00000392050 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
CLCP2-201ENST00000392050 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
CLCP2-201ENST00000392050 GRIN2BQ13224 1484 aa19.37■□□□□ 0.69
CLCP2-201ENST00000392050 SNAPC4Q5SXM2 1469 aa19.37■□□□□ 0.69
CLCP2-201ENST00000392050 MAGI1Q96QZ7 1491 aaPredicted RBP19.36■□□□□ 0.69
CLCP2-201ENST00000392050 ARHGEF11O15085 1522 aa19.35■□□□□ 0.69
CLCP2-201ENST00000392050 PBRM1Q86U86 1689 aa19.33■□□□□ 0.69
CLCP2-201ENST00000392050 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
CLCP2-201ENST00000392050 GAPVD1Q14C86 1478 aa19.32■□□□□ 0.68
CLCP2-201ENST00000392050 ABCA10Q8WWZ4 1543 aa19.31■□□□□ 0.68
CLCP2-201ENST00000392050 WRNQ14191 1432 aaPredicted RBP eCLIP19.31■□□□□ 0.68
CLCP2-201ENST00000392050 BIVM-ERCC5R4GMW8 1640 aa19.3■□□□□ 0.68
CLCP2-201ENST00000392050 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
CLCP2-201ENST00000392050 SYNJ1O43426 1573 aa19.29■□□□□ 0.68
CLCP2-201ENST00000392050 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
CLCP2-201ENST00000392050 ABCA5Q8WWZ7 1642 aa19.28■□□□□ 0.68
CLCP2-201ENST00000392050 CLASP1Q7Z460 1538 aa19.2■□□□□ 0.66
CLCP2-201ENST00000392050 CYB5RLQ6IPT4 315 aa19.2■□□□□ 0.66
CLCP2-201ENST00000392050 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
CLCP2-201ENST00000392050 ADAMTS12P58397 1594 aa19.12■□□□□ 0.65
CLCP2-201ENST00000392050 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
CLCP2-201ENST00000392050 GRIN2AQ12879 1464 aa19.1■□□□□ 0.65
CLCP2-201ENST00000392050 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.65
CLCP2-201ENST00000392050 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
CLCP2-201ENST00000392050 NUP160Q12769 1436 aa19.01■□□□□ 0.63
CLCP2-201ENST00000392050 CEP170Q5SW79 1584 aa19.01■□□□□ 0.63
CLCP2-201ENST00000392050 TRHP20396 242 aaPredicted RBP18.98■□□□□ 0.63
CLCP2-201ENST00000392050 KIF27Q86VH2 1401 aa18.95■□□□□ 0.62
CLCP2-201ENST00000392050 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
CLCP2-201ENST00000392050 CUL7Q14999 1698 aa18.91■□□□□ 0.62
CLCP2-201ENST00000392050 ERCC6L2Q5T890 1561 aa18.87■□□□□ 0.61
CLCP2-201ENST00000392050 RUSC2Q8N2Y8 1516 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms